breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,429	Δ1 bp	6.2%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	6.6%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	26,844	A→T	5.4%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	68,340	G→T	6.4%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	5.8%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	6.6%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	74,755	T→G	7.1%	K24Q (AAG→CAG)	PP_0064 ←	hypothetical protein
RA	78,506	C→T	5.5%	intergenic (‑34/+27)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,507	G→C	5.5%	intergenic (‑35/+26)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,508	G→C	5.5%	intergenic (‑36/+25)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,509	A→G	5.4%	intergenic (‑37/+24)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	83,541	T→C	5.7%	L94P (CTG→CCG)	hemF →	coproporphyrinogen‑III oxidase
RA	87,493	T→A	6.7%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	92,184	G→T	5.1%	L66M (CTG→ATG)	trpA ←	tryptophan synthase subunit alpha
RA	92,186	T→C	5.0%	Q65R (CAG→CGG) ‡	trpA ←	tryptophan synthase subunit alpha
RA	92,187	G→A	5.0%	Q65* (CAG→TAG) ‡	trpA ←	tryptophan synthase subunit alpha
RA	103,818	A→T	8.1%	intergenic (+116/‑24)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,819	T→A	7.5%	intergenic (+117/‑23)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,820	T→A	7.8%	intergenic (+118/‑22)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,821	A→T	6.7%	intergenic (+119/‑21)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	104,876	G→C	6.7%	P345P (CCG→CCC)	PP_0099 →	hypothetical protein
RA	109,427	T→C	6.2%	F206F (TTT→TTC)	PP_0103 →	cytochrome c oxidase subunit 2
RA	109,430	C→T	6.1%	V207V (GTC→GTT)	PP_0103 →	cytochrome c oxidase subunit 2
RA	109,434	G→A	5.9%	E209K (GAA→AAA)	PP_0103 →	cytochrome c oxidase subunit 2
RA	126,115	A→G	5.9%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	5.9%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	152,157	A→T	11.3%	intergenic (‑51/+43)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	152,158	A→T	11.3%	intergenic (‑52/+42)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	158,054	A→C	7.6%	N22T (AAC→ACC)	PP_0148 →	hypothetical protein
RA	162,281	A→T	5.0%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	5.7%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	181,805	T→C	6.6%	intergenic (+19/‑87)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	182,034	G→A	9.4%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	10.3%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	9.6%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	194,606	G→C	5.8%	E38Q (GAA→CAA) ‡	PP_0168 →	putative surface adhesion protein
RA	194,608	A→C	6.4%	E38D (GAA→GAC) ‡	PP_0168 →	putative surface adhesion protein
RA	194,609	G→T	5.8%	V39L (GTG→TTG) ‡	PP_0168 →	putative surface adhesion protein
RA	194,611	G→C	5.5%	V39V (GTG→GTC) ‡	PP_0168 →	putative surface adhesion protein
RA	195,559	C→A	26.7%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	6.0%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	6.0%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	47.3%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	16.1%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	16.5%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	20.5%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	16.6%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	7.2%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	13.8%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	8.9%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	19.7%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	5.6%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	12.9%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	18.1%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	20.1%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	15.1%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	9.2%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,367	G→C	6.3%	V1291V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	206,323	C→T	5.7%	G3943G (GGC→GGT)	PP_0168 →	putative surface adhesion protein
RA	220,004	C→A	9.1%	Q8504K (CAG→AAG)	PP_0168 →	putative surface adhesion protein
RA	223,868	G→C	7.6%	G233R (GGG→CGG) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	223,869	G→C	5.6%	G233A (GGG→GCG) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	223,870	G→C	5.9%	G233G (GGG→GGC) ‡	PP_0171 →	ABC transporter ATP‑binding protein
RA	227,872	G→A	5.6%	R233H (CGC→CAC)	PP_0176 →	putative efflux transporter
RA	233,832	A→T	7.6%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	8.8%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	7.6%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	243,623	T→A	5.3%	K183I (AAA→ATA)	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	274,145	A→T	5.9%	L142Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,148	A→T	5.9%	L141Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,151	A→T	5.9%	L140Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,154	A→T	5.9%	L139Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,160	C→A	5.1%	R137L (CGT→CTT)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	278,742:1	+A	100%	intergenic (‑237/+77)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	284,586	T→A	8.5%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	9.9%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	289,942	C→A	7.2%	intergenic (+26/‑140)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,944	G→C	7.4%	intergenic (+28/‑138)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	289,946	T→G	7.6%	intergenic (+30/‑136)	oprE → / → PP_0235	outer‑membrane porin E/peroxidase
RA	292,606	C→G	5.1%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	295,246	G→A	5.6%	G217E (GGG→GAG)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,249	T→C	5.6%	L218P (CTC→CCC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	297,352	C→A	5.1%	E218* (GAA→TAA)	gshA ←	glutamate‑‑cysteine ligase
RA	298,117	C→G	5.5%	intergenic (‑114/+40)	gshA ← / ← PP_0244	glutamate‑‑cysteine ligase/hypothetical protein
RA	298,118	A→C	5.2%	intergenic (‑115/+39)	gshA ← / ← PP_0244	glutamate‑‑cysteine ligase/hypothetical protein
RA	298,119	G→T	5.3%	intergenic (‑116/+38)	gshA ← / ← PP_0244	glutamate‑‑cysteine ligase/hypothetical protein
RA	298,120	C→G	5.3%	intergenic (‑117/+37)	gshA ← / ← PP_0244	glutamate‑‑cysteine ligase/hypothetical protein
RA	304,429	C→T	5.2%	R114H (CGC→CAC)	PP_0249 ←	hypothetical protein
RA	307,865:1	+C	100%	intergenic (+880/‑989)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	322,133	G→A	8.5%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	325,159	C→G	5.2%	P149A (CCA→GCA)	oprQ →	outer‑membrane porin D
RA	334,836	T→G	7.4%	intergenic (‑151/+137)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	334,837	G→C	7.7%	intergenic (‑152/+136)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	334,838	C→A	7.6%	intergenic (‑153/+135)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	336,124:1	+T	100%	coding (209/237 nt)	PP_0278 →	hypothetical protein
RA	337,809	A→G	30.6%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,816:1	+A	33.3%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819	A→C	30.7%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	C→G	29.5%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	G→T	31.3%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,827	Δ1 bp	31.2%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,836	C→T	36.2%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	338,065	G→T	12.4%	A168A (GCC→GCA)	PP_0280 ←	amino acid ABC transporter permease
RA	338,068	A→C	12.5%	S167R (AGT→AGG)	PP_0280 ←	amino acid ABC transporter permease
RA	351,749	C→T	6.3%	Q79* (CAG→TAG) ‡	hisA →	phosphoribosylformimino‑5‑aminoimidazole carboxamide ribonucleotide isomerase
RA	351,750	A→G	6.2%	Q79R (CAG→CGG) ‡	hisA →	phosphoribosylformimino‑5‑aminoimidazole carboxamide ribonucleotide isomerase
RA	353,067	A→G	100%	intergenic (+34/+84)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	373,393	C→G	5.3%	T212S (ACC→AGC)	dgcB →	dimethylglycine dehydrogenase subunit
RA	373,407	C→G	5.3%	L217V (CTG→GTG)	dgcB →	dimethylglycine dehydrogenase subunit
RA	374,742	C→G	5.2%	A11G (GCC→GGC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	385,475	A→C	6.2%	intergenic (+15/+20)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	385,477	G→T	6.2%	intergenic (+17/+18)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	391,944	G→C	5.2%	V740L (GTA→CTA)	soxA →	sarcosine oxidase subunit alpha
RA	395,678	T→A	5.1%	W354R (TGG→AGG)	fdhA →	formaldehyde dehydrogenase
RA	396,848	Δ1 bp	6.8%	coding (98/924 nt)	PP_0329 ←	hypothetical protein
RA	396,855	G→T	6.8%	R31R (CGG→AGG)	PP_0329 ←	hypothetical protein
RA	396,856	C→G	6.8%	L30L (CTG→CTC) ‡	PP_0329 ←	hypothetical protein
RA	396,857	A→C	7.0%	L30R (CTG→CGG) ‡	PP_0329 ←	hypothetical protein
RA	396,862:1	+G	7.3%	coding (84/924 nt)	PP_0329 ←	hypothetical protein
RA	416,121	G→C	5.9%	D297H (GAC→CAC)	waaC →	ADP‑heptose‑‑LPS heptosyltransferase
RA	418,295	C→G	8.1%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,296	C→G	7.1%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	432,365	G→T	6.9%	intergenic (‑52/‑41)	PP_0354 ← / → PP_0355	CBS domain‑containing protein/two‑component system response regulator
RA	432,993	A→T	6.7%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,994	A→T	6.7%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,995	A→T	6.6%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	450,918	T→C	6.5%	noncoding (115/127 nt)	PP_mr05 →	RsmY ncRNA
RA	450,919	T→G	6.5%	noncoding (116/127 nt)	PP_mr05 →	RsmY ncRNA
RA	450,920	C→A	6.5%	noncoding (117/127 nt)	PP_mr05 →	RsmY ncRNA
RA	450,921	G→A	6.6%	noncoding (118/127 nt)	PP_mr05 →	RsmY ncRNA
RA	459,904	A→C	5.0%	intergenic (‑50/+29)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	460,935	G→C	6.0%	P510P (CCC→CCG) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,936	G→C	6.0%	P510R (CCC→CGC) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,937	G→C	6.0%	P510A (CCC→GCC) ‡	pqqF ←	coenzyme PQQ synthesis protein F
RA	460,938	G→C	6.0%	I509M (ATC→ATG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	471,066	T→C	5.0%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,067	G→A	5.2%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	490,736	G→A	5.7%	P562L (CCG→CTG)	lptD ←	LPS‑assembly protein LptD
RA	490,739	A→C	5.4%	L561R (CTG→CGG) ‡	lptD ←	LPS‑assembly protein LptD
RA	490,740	G→T	5.8%	L561M (CTG→ATG) ‡	lptD ←	LPS‑assembly protein LptD
RA	490,743	T→C	5.8%	S560G (AGC→GGC)	lptD ←	LPS‑assembly protein LptD
RA	491,089	G→A	6.9%	N444N (AAC→AAT) ‡	lptD ←	LPS‑assembly protein LptD
RA	491,090	T→A	6.7%	N444I (AAC→ATC) ‡	lptD ←	LPS‑assembly protein LptD
RA	491,091	T→C	6.6%	N444D (AAC→GAC) ‡	lptD ←	LPS‑assembly protein LptD
RA	499,203	A→G	100%	intergenic (+47/‑249)	uhpA → / → PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
RA	503,825	Δ1 bp	7.4%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,831	A→T	7.4%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,832	A→T	7.4%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	508,771	Δ1 bp	6.9%	coding (240/1890 nt)	estP ←	esterase EstP
RA	508,775	A→T	6.2%	V79D (GTC→GAC)	estP ←	esterase EstP
RA	508,778:1	+G	6.7%	coding (233/1890 nt)	estP ←	esterase EstP
RA	513,469	C→A	7.9%	intergenic (‑116/‑75)	crp ← / → yhfA	DNA‑binding transcriptional dual regulator/hypothetical protein
RA	516,693	T→G	5.2%	E100A (GAA→GCA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	516,694	C→A	5.2%	E100* (GAA→TAA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	524,336	A→G	8.5%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,349	G→C	9.1%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	8.8%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	537,572	G→T	5.3%	intergenic (+102/‑51)	PP_mr07 → / → rpoB	P26 ncRNA/DNA‑directed RNA polymerase subunit beta
RA	538,396	C→T	6.1%	D258D (GAC→GAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	538,397	A→G	6.1%	I259V (ATC→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	542,569	G→A	56.2%	R270H (CGC→CAC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,727	A→G	5.7%	N656S (AAC→AGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	552,256	T→A	6.8%	L186M (TTG→ATG)	rplD →	50S ribosomal protein L4
RA	571,617	G→A	7.9%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,618	T→C	8.1%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	583,719	C→G	8.7%	P529A (CCC→GCC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,720	C→G	8.4%	P529R (CCC→CGC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,721	C→G	8.4%	P529P (CCC→CCG) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	618,358	A→G	5.8%	S71P (TCG→CCG)	PP_0532 ←	hypothetical protein
RA	625,062	C→T	5.1%	intergenic (‑156/+27)	PP_0537 ← / ← ppa	transcriptional regulator/inorganic pyrophosphatase
RA	632,035	C→G	5.9%	G469A (GGC→GCC)	aldB‑I ←	aldehyde dehydrogenase
RA	632,038	A→C	5.8%	F468C (TTC→TGC)	aldB‑I ←	aldehyde dehydrogenase
RA	632,040	C→T	6.0%	A467A (GCG→GCA)	aldB‑I ←	aldehyde dehydrogenase
RA	632,043	G→C	6.0%	A466A (GCC→GCG)	aldB‑I ←	aldehyde dehydrogenase
RA	632,046	A→G	5.8%	H465H (CAT→CAC) ‡	aldB‑I ←	aldehyde dehydrogenase
RA	632,048	G→T	5.8%	H465N (CAT→AAT) ‡	aldB‑I ←	aldehyde dehydrogenase
RA	632,051	C→G	5.8%	A464P (GCG→CCG)	aldB‑I ←	aldehyde dehydrogenase
RA	648,287	A→C	8.6%	intergenic (+56/+35)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,289	A→T	8.6%	intergenic (+58/+33)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,291	G→T	8.3%	intergenic (+60/+31)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,590	G→A	20.9%	P363L (CCG→CTG)	accC ←	acetyl‑CoA carboxylase biotin carboxylase subunit
RA	650,845	T→A	9.0%	intergenic (‑134/+46)	aroQ‑I ← / ← dsbD‑I	type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1
RA	650,846	T→A	9.0%	intergenic (‑135/+45)	aroQ‑I ← / ← dsbD‑I	type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1
RA	650,848	A→T	9.6%	intergenic (‑137/+43)	aroQ‑I ← / ← dsbD‑I	type II 3‑dehydroquinate dehydratase/thiol/disulfide interchange protein 1
RA	683,823	T→C	8.2%	S10G (AGC→GGC)	PP_0585 ←	MerR family metal‑sensitive transcriptional regulator
RA	688,789	G→T	5.2%	intergenic (+285/‑166)	PP_5446 → / → PP_0590	hypothetical protein/ArsR family transcriptional regulator
RA	697,214	T→C	12.0%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,225	C→G	11.6%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	11.2%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,239	G→A	9.3%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,722	A→G	48.4%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,764	T→G	12.6%	intergenic (+12/‑120)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,765	A→T	12.4%	intergenic (+13/‑119)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,766	C→A	13.3%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	708,759	A→G	5.2%	A387A (GCA→GCG)	murJ →	lipid II flippase
RA	708,760	G→A	5.2%	V388I (GTC→ATC)	murJ →	lipid II flippase
RA	711,079	C→G	5.9%	Q293E (CAA→GAA)	ileS →	isoleucine‑‑tRNA ligase
RA	711,082	G→C	6.0%	G294R (GGT→CGT) ‡	ileS →	isoleucine‑‑tRNA ligase
RA	711,083	G→C	5.7%	G294A (GGT→GCT) ‡	ileS →	isoleucine‑‑tRNA ligase
RA	711,086	C→G	5.9%	S295W (TCG→TGG)	ileS →	isoleucine‑‑tRNA ligase
RA	713,097	T→A	7.7%	I29N (ATC→AAC)	lspA →	lipoprotein signal peptidase
RA	727,315	C→T	10.5%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,316	A→T	9.9%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,317	A→G	10.1%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	728,794	A→C	6.3%	I95L (ATC→CTC) ‡	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	728,795	T→A	6.4%	I95N (ATC→AAC) ‡	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	728,800	A→C	7.6%	K97Q (AAG→CAG)	rluD →	23S rRNA pseudouridine(1911/1915/1917) synthase
RA	772,183	G→A	6.7%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	782,852	C→A	5.2%	R1025L (CGC→CTC)	PP_0672 ←	sensory box protein
RA	788,581	C→A	5.2%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,583	A→T	5.1%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	T→G	5.2%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,596	T→C	5.4%	intergenic (+46/‑167)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	791,454	T→A	5.6%	H532L (CAC→CTC)	PP_0678 ←	hypothetical protein
RA	813,200	T→G	9.4%	intergenic (+107/+24)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,201	T→C	9.4%	intergenic (+108/+23)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,202	G→A	9.5%	intergenic (+109/+22)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,203	C→A	9.2%	intergenic (+110/+21)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	837,811	T→C	6.2%	K52E (AAA→GAA)	pth ←	peptidyl‑tRNA hydrolase
RA	848,503	G→A	5.3%	L23F (CTT→TTT)	PP_0730 ←	hypothetical protein
RA	848,505	C→G	5.4%	R22P (CGG→CCG)	PP_0730 ←	hypothetical protein
RA	848,507	T→C	5.6%	K21K (AAA→AAG)	PP_0730 ←	hypothetical protein
RA	854,663	G→A	6.9%	A88T (GCC→ACC)	moeB →	molybdopterin synthase adenylyltransferase subunit
RA	863,376	A→T	11.2%	A170A (GCA→GCT)	hemH →	ferrochelatase
RA	868,052	A→C	5.8%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	886,083	G→C	5.0%	W665S (TGG→TCG) ‡	PP_0767 →	LuxR family transcriptional regulator
RA	886,084	G→A	5.0%	W665* (TGG→TGA) ‡	PP_0767 →	LuxR family transcriptional regulator
RA	891,706	T→C	6.2%	D670G (GAC→GGC)	pta ←	phosphate acetyltransferase
RA	895,198	G→C	5.6%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,207	G→C	5.8%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	5.5%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→C	6.7%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	924,319	T→C	7.9%	T292A (ACG→GCG)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,320	C→G	7.9%	A291A (GCG→GCC) ‡	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,321	G→A	7.8%	A291V (GCG→GTG) ‡	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	942,955	G→A	5.5%	N889N (AAC→AAT)	PP_0806 ←	surface adhesion protein
RA	945,383	C→T	5.4%	G80D (GGC→GAC)	PP_0806 ←	surface adhesion protein
RA	951,217	A→T	5.0%	I16I (ATA→ATT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	954,436	T→G	5.2%	L93R (CTC→CGC)	cyoE →	protoheme IX farnesyltransferase
RA	955,149	A→G	29.4%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,151	G→A	32.1%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	T→A	31.9%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,153	T→C	32.1%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	C→T	42.9%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	969,604	G→A	5.2%	A173T (GCC→ACC)	queA →	S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase
RA	983,584	A→T	5.3%	intergenic (+42/‑47)	iscX → / → ndk	cysteine desulfurase activity regulator/nucleoside diphosphate kinase
RA	988,216	G→A	6.1%	R23H (CGC→CAC)	hisS →	histidine‑‑tRNA ligase
RA	994,948	T→A	5.0%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	1,000,064	T→A	6.0%	I19F (ATC→TTC)	PP_0861 ←	outer membrane ferric siderophore receptor
RA	1,005,620	C→A	8.1%	L184M (CTG→ATG) ‡	PP_0867 →	FecA‑like outer membrane receptor
RA	1,005,621	T→G	8.2%	L184R (CTG→CGG) ‡	PP_0867 →	FecA‑like outer membrane receptor
RA	1,007,574	A→T	8.5%	intergenic (+74/+16)	PP_0867 → / ← yehX	FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein
RA	1,007,575	A→T	8.6%	intergenic (+75/+15)	PP_0867 → / ← yehX	FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein
RA	1,007,576	A→T	8.1%	intergenic (+76/+14)	PP_0867 → / ← yehX	FecA‑like outer membrane receptor/ABC transporter ATP‑binding protein
RA	1,013,241	G→C	21.9%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,242	G→C	20.8%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,248	A→T	23.3%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,249	T→G	29.2%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,255	A→T	30.4%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,017,449	T→A	5.8%	E138V (GAA→GTA)	PP_5461 ←	hypothetical protein
RA	1,017,834	C→T	6.3%	G10S (GGT→AGT)	PP_5461 ←	hypothetical protein
RA	1,017,836	A→T	6.4%	L9* (TTA→TAA) ‡	PP_5461 ←	hypothetical protein
RA	1,017,837	A→T	6.3%	L9I (TTA→ATA) ‡	PP_5461 ←	hypothetical protein
RA	1,017,839	A→G	6.3%	L8P (CTT→CCT)	PP_5461 ←	hypothetical protein
RA	1,025,784	T→G	7.2%	D395A (GAC→GCC)	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,025,786	C→G	7.1%	A394A (GCG→GCC) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,025,788	C→A	7.0%	A394S (GCG→TCG) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,038,225	G→C	5.1%	G390G (GGC→GGG)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,234	G→C	5.3%	G387G (GGC→GGG)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,237	T→G	5.2%	V386V (GTA→GTC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,262	G→C	9.3%	R45G (CGC→GGC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,266	A→T	9.2%	A43A (GCT→GCA)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,270	G→C	9.0%	P42R (CCT→CGT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,063,994	C→A	6.4%	S72I (AGC→ATC)	PP_0921 ←	ArsR family transcriptional regulator
RA	1,070,246:1	+GA	100%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,260	G→C	36.0%	intergenic (+60/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,263	G→C	36.0%	intergenic (+63/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,104,557	G→A	6.3%	intergenic (+50/‑42)	murA → / → hisG	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase/ATP phosphoribosyltransferase
RA	1,104,558	A→T	6.1%	intergenic (+51/‑41)	murA → / → hisG	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase/ATP phosphoribosyltransferase
RA	1,104,559	T→C	6.5%	intergenic (+52/‑40)	murA → / → hisG	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase/ATP phosphoribosyltransferase
RA	1,111,305	G→T	5.2%	intergenic (+26/‑84)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,122,761	G→A	5.0%	intergenic (+32/+115)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,126,645:1	+C	100%	intergenic (‑99/+50)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,152,999	A→C	6.1%	D575A (GAC→GCC)	edd →	phosphogluconate dehydratase
RA	1,178,751	T→A	8.2%	intergenic (+56/+38)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,752	G→T	8.1%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,753	A→C	8.0%	intergenic (+58/+36)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,754	T→A	9.0%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,229,547	G→C	8.7%	Q909H (CAG→CAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,234,328	T→A	7.2%	I320F (ATC→TTC)	glpK ←	glycerol kinase
RA	1,234,331	T→G	7.8%	K319Q (AAG→CAG)	glpK ←	glycerol kinase
RA	1,234,332	C→A	8.5%	L318L (CTG→CTT)	glpK ←	glycerol kinase
RA	1,234,335	T→A	7.6%	E317D (GAA→GAT)	glpK ←	glycerol kinase
RA	1,235,697	G→T	5.1%	A164A (GCC→GCA)	glpF ←	aquaglyceroporin
RA	1,235,703	C→T	5.3%	L162L (CTG→CTA) ‡	glpF ←	aquaglyceroporin
RA	1,235,704	A→C	5.3%	L162R (CTG→CGG) ‡	glpF ←	aquaglyceroporin
RA	1,235,705	G→T	5.3%	L162M (CTG→ATG) ‡	glpF ←	aquaglyceroporin
RA	1,235,706	A→G	5.4%	I161I (ATT→ATC)	glpF ←	aquaglyceroporin
RA	1,235,712	A→C	5.5%	T159T (ACT→ACG)	glpF ←	aquaglyceroporin
RA	1,237,648	T→C	5.9%	E154G (GAG→GGG)	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,241,962:1	+T	8.9%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,967	Δ1 bp	7.8%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,242,983	G→A	9.6%	intergenic (‑99/‑126)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,242,984	G→C	9.5%	intergenic (‑100/‑125)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,242,985	T→C	9.8%	intergenic (‑101/‑124)	PP_1083 ← / → tsaA	(2Fe‑2S)‑binding protein/peroxiredoxin
RA	1,243,725	G→A	5.8%	intergenic (+14/+85)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,738	T→A	8.4%	intergenic (+27/+72)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,739	T→C	8.6%	intergenic (+28/+71)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,740	C→G	8.7%	intergenic (+29/+70)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,741	G→A	8.6%	intergenic (+30/+69)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,742	T→A	8.3%	intergenic (+31/+68)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,245,330	G→C	5.6%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,334	G→C	5.7%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,338	G→C	6.7%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,245,701	T→G	6.0%	L19R (CTG→CGG)	PP_1087 →	OmpA family outer membrane protein
RA	1,245,704	C→A	6.4%	P20Q (CCG→CAG)	PP_1087 →	OmpA family outer membrane protein
RA	1,245,708	C→T	6.3%	A21A (GCC→GCT)	PP_1087 →	OmpA family outer membrane protein
RA	1,255,753	G→C	5.1%	R32P (CGC→CCC)	mrp →	ATP‑dependent Fe‑S cluster transferase
RA	1,273,533	A→C	6.3%	H14Q (CAT→CAG)	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,536	G→A	6.4%	N13N (AAC→AAT) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,537	T→C	6.6%	N13S (AAC→AGC) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,542	G→A	6.6%	D11D (GAC→GAT) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,543	T→C	6.6%	D11G (GAC→GGC) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,546	G→T	7.6%	P10H (CCT→CAT)	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,288,779	G→T	5.6%	A18S (GCC→TCC)	PP_1126 →	hydrolase
RA	1,294,115	A→T	5.2%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,295,013	Δ1 bp	11.1%	intergenic (+29/+41)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,018	T→A	11.5%	intergenic (+34/+36)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,021	T→A	11.2%	intergenic (+37/+33)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,025:1	+T	9.5%	intergenic (+41/+29)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,306,911	G→T	8.0%	A236D (GCT→GAT)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,306,916	G→C	6.7%	R234R (CGC→CGG) ‡	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,306,917	C→G	6.4%	R234P (CGC→CCC) ‡	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,306,918	G→C	7.0%	R234G (CGC→GGC) ‡	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,306,923	A→C	6.9%	I232S (ATC→AGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,327,121	C→T	45.3%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,350,501	T→A	9.3%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,502	T→A	9.3%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,364,660	A→T	5.6%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,368,197	G→T	5.5%	intergenic (+26/‑157)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,199	G→C	5.9%	intergenic (+28/‑155)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,368,201	A→C	5.3%	intergenic (+30/‑153)	PP_1193 → / → PP_1194	membrane protein/hypothetical protein
RA	1,382,326	A→T	7.1%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,383,070	T→G	5.6%	E77D (GAA→GAC)	PP_1204 ←	lipoprotein
RA	1,383,620	G→A	6.0%	P471S (CCG→TCG)	proS ←	proline‑‑tRNA ligase
RA	1,383,621	A→C	6.2%	A470A (GCT→GCG)	proS ←	proline‑‑tRNA ligase
RA	1,383,625	A→C	6.2%	L469R (CTG→CGG) ‡	proS ←	proline‑‑tRNA ligase
RA	1,383,626	G→T	6.6%	L469M (CTG→ATG) ‡	proS ←	proline‑‑tRNA ligase
RA	1,383,630	G→T	6.7%	D467E (GAC→GAA) ‡	proS ←	proline‑‑tRNA ligase
RA	1,383,631	T→C	8.0%	D467G (GAC→GGC) ‡	proS ←	proline‑‑tRNA ligase
RA	1,385,148	T→A	5.5%	intergenic (‑118/+43)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,149	G→T	5.6%	intergenic (‑119/+42)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,150	A→C	5.6%	intergenic (‑120/+41)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,152	T→C	5.6%	intergenic (‑122/+39)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,391,990	C→T	5.6%	intergenic (+21/‑94)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,391,991	A→G	5.6%	intergenic (+22/‑93)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,400,419	G→C	5.5%	G130A (GGT→GCT)	ybgF →	TolQRA transport system periplasmic protein
RA	1,400,872	C→A	9.0%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,874	A→T	8.6%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,876	T→G	7.6%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,590	G→A	42.8%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,591	T→C	42.9%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,412,586	G→A	6.9%	P90P (CCG→CCA)	PP_1234 →	permease
RA	1,417,328	Δ1 bp	8.1%	coding (576/759 nt)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,417,332:1	+A	8.2%	coding (580/759 nt)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,418,249	G→T	10.0%	L236L (CTG→CTT)	purC →	phosphoribosylaminoimidazole‑succinocarboxamide synthase
RA	1,418,250	T→A	9.3%	*237K (TAA→AAA) ‡	purC →	phosphoribosylaminoimidazole‑succinocarboxamide synthase
RA	1,418,251	A→C	9.8%	*237S (TAA→TCA) ‡	purC →	phosphoribosylaminoimidazole‑succinocarboxamide synthase
RA	1,419,548:1	+C	51.8%	intergenic (‑37/+99)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,428,975	A→G	7.8%	Y359C (TAC→TGC) ‡	mqo‑II →	malate:quinone oxidoreductase
RA	1,428,976	C→G	7.9%	Y359* (TAC→TAG) ‡	mqo‑II →	malate:quinone oxidoreductase
RA	1,428,977	C→G	7.9%	P360A (CCA→GCA) ‡	mqo‑II →	malate:quinone oxidoreductase
RA	1,428,978	C→T	7.9%	P360L (CCA→CTA) ‡	mqo‑II →	malate:quinone oxidoreductase
RA	1,431,880	T→C	8.4%	intergenic (‑9/‑41)	PP_1253 ← / → xenA	ArsR family transcriptional regulator/protein XenA
RA	1,431,883	G→A	8.3%	intergenic (‑12/‑38)	PP_1253 ← / → xenA	ArsR family transcriptional regulator/protein XenA
RA	1,445,385	G→C	6.2%	G337R (GGG→CGG) ‡	PP_1263 →	fusaric acid resistance protein
RA	1,445,386	G→C	5.8%	G337A (GGG→GCG) ‡	PP_1263 →	fusaric acid resistance protein
RA	1,445,387	G→C	6.2%	G337G (GGG→GGC) ‡	PP_1263 →	fusaric acid resistance protein
RA	1,450,049	G→A	11.3%	R7C (CGC→TGC)	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,050	A→C	10.0%	N6K (AAT→AAG) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,051	T→C	10.0%	N6S (AAT→AGT) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,059	C→A	10.0%	R3S (AGG→AGT) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,061	T→A	9.4%	R3W (AGG→TGG) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,062	T→A	9.4%	T2T (ACA→ACT) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,064	T→G	9.4%	T2P (ACA→CCA) ‡	PP_1268 ←	HtrA suppressor protein SohA
RA	1,450,072	G→A	9.0%	intergenic (‑5/+25)	PP_1268 ← / ← PP_1269	HtrA suppressor protein SohA/universal stress protein family protein
RA	1,450,073	G→T	10.4%	intergenic (‑6/+24)	PP_1268 ← / ← PP_1269	HtrA suppressor protein SohA/universal stress protein family protein
RA	1,450,074	T→C	9.1%	intergenic (‑7/+23)	PP_1268 ← / ← PP_1269	HtrA suppressor protein SohA/universal stress protein family protein
RA	1,451,010	T→A	6.6%	L65* (TTG→TAG)	PP_1270 →	LysR family transcriptional regulator
RA	1,457,146	G→A	6.0%	Y111Y (TAC→TAT)	PP_1275 ←	hypothetical protein
RA	1,457,343	G→C	5.9%	R46G (CGC→GGC)	PP_1275 ←	hypothetical protein
RA	1,464,196	G→A	9.5%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,198	T→A	8.6%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,200	T→C	8.8%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,495,653	C→A	5.8%	L28M (CTG→ATG)	mdeA →	methionine gamma‑lyase
RA	1,495,891	T→C	7.5%	L107P (CTG→CCG)	mdeA →	methionine gamma‑lyase
RA	1,499,480	2 bp→AC	100%	intergenic (+57/‑106)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,498	1 bp→CG	100%	intergenic (+75/‑89)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,506:1	+C	100%	intergenic (+83/‑81)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,636	T→C	5.9%	F17S (TTC→TCC)	zapE →	nucleoside triphosphate hydrolase domain‑containing protein
RA	1,503,465	G→T	10.7%	E90* (GAG→TAG) ‡	rplM →	50S ribosomal protein L13
RA	1,503,466	A→C	10.7%	E90A (GAG→GCG) ‡	rplM →	50S ribosomal protein L13
RA	1,506,927	G→A	29.1%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,930	T→C	26.9%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,079	G→T	6.3%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,080	A→C	5.5%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,520,991	T→A	5.7%	L83* (TTG→TAG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,526,571	G→T	6.0%	C253F (TGC→TTC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,580	T→A	8.1%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,727	T→A	5.2%	L305Q (CTG→CAG)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,528,705	T→C	5.5%	V349A (GTA→GCA)	ftsA →	cell division protein FtsA
RA	1,528,711	T→C	5.3%	L351P (CTG→CCG)	ftsA →	cell division protein FtsA
RA	1,528,718	G→A	5.3%	V353V (GTG→GTA)	ftsA →	cell division protein FtsA
RA	1,531,231	T→C	7.1%	intergenic (+33/+15)	lpxC → / ← PP_1344	UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein
RA	1,531,232	T→G	6.9%	intergenic (+34/+14)	lpxC → / ← PP_1344	UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein
RA	1,531,233	C→A	6.6%	intergenic (+35/+13)	lpxC → / ← PP_1344	UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein
RA	1,531,234	G→A	7.1%	intergenic (+36/+12)	lpxC → / ← PP_1344	UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein
RA	1,533,770	G→A	19.4%	R594H (CGT→CAT)	secA →	protein translocase subunit SecA
RA	1,534,889	T→C	5.6%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,893	C→T	5.6%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,898	A→G	5.4%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,902	G→A	5.3%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,489	C→A	27.4%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,492	G→C	27.3%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,494	C→G	28.6%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,499	C→G	28.6%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,501	G→C	28.4%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,504	T→G	31.6%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,553,210	A→C	5.6%	E84A (GAG→GCG)	PP_1363 →	hypothetical protein
RA	1,553,213	G→T	6.6%	R85L (CGC→CTC)	PP_1363 →	hypothetical protein
RA	1,562,169	T→G	6.9%	intergenic (‑79/‑90)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,562,170	C→G	6.0%	intergenic (‑80/‑89)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,562,171	C→A	6.0%	intergenic (‑81/‑88)	pctA ← / → PP_1372	methyl‑accepting chemotaxis protein PctA/hypothetical protein
RA	1,568,915	G→A	6.3%	intergenic (+52/‑275)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,581,266	G→T	100%	A44D (GCC→GAC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,582,780	T→A	7.4%	intergenic (‑226/‑32)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,787	T→G	6.6%	intergenic (‑233/‑25)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,591,982	C→A	10.1%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,987	T→G	9.6%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,594,249	T→C	6.0%	T392A (ACC→GCC)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,250	G→A	6.1%	G391G (GGC→GGT)	kgtP ←	alpha‑ketoglutarate permease
RA	1,598,813	C→A	7.7%	intergenic (‑52/+79)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,623,383	G→A	6.1%	intergenic (‑27/+23)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,623,386	A→C	6.3%	intergenic (‑30/+20)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,623,388	A→T	6.3%	intergenic (‑32/+18)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,623,390	G→T	6.5%	intergenic (‑34/+16)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,623,393	T→C	6.5%	intergenic (‑37/+13)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,637,315	T→C	6.6%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,325	A→T	8.2%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,326	A→T	7.7%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,575	C→T	12.5%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,576	G→T	12.5%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,580	G→A	12.4%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,581	T→C	12.3%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,585	A→C	13.0%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,586	A→G	13.4%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,596	C→T	8.9%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,641,625	G→A	8.8%	N22N (AAC→AAT) ‡	cmoA ←	tRNA 5‑methoxyuridine(34)/uridine‑5‑oxyacetic acid(34) metyltransferase CmoA
RA	1,641,626	T→A	10.2%	N22I (AAC→ATC) ‡	cmoA ←	tRNA 5‑methoxyuridine(34)/uridine‑5‑oxyacetic acid(34) metyltransferase CmoA
RA	1,641,627	T→C	9.0%	N22D (AAC→GAC) ‡	cmoA ←	tRNA 5‑methoxyuridine(34)/uridine‑5‑oxyacetic acid(34) metyltransferase CmoA
RA	1,642,264	G→A	6.1%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,271	G→C	8.3%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,277	G→C	8.4%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,278	C→G	8.4%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,279	G→C	8.3%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,285	G→C	7.6%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,653,161	A→G	6.3%	L1203P (CTG→CCG)	PP_1449 ←	hypothetical protein
RA	1,661,483	T→G	5.2%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,670,626	T→C	5.1%	intergenic (+49/‑46)	rplS → / → PP_1466	50S ribosomal protein L19/acyl‑CoA thioesterase
RA	1,670,627	T→G	5.1%	intergenic (+50/‑45)	rplS → / → PP_1466	50S ribosomal protein L19/acyl‑CoA thioesterase
RA	1,670,628	C→A	5.1%	intergenic (+51/‑44)	rplS → / → PP_1466	50S ribosomal protein L19/acyl‑CoA thioesterase
RA	1,670,629	G→A	5.4%	intergenic (+52/‑43)	rplS → / → PP_1466	50S ribosomal protein L19/acyl‑CoA thioesterase
RA	1,693,685	C→G	7.3%	P52A (CCT→GCT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,686	C→G	7.3%	P52R (CCT→CGT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,707,227	G→C	8.4%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,230	G→C	11.7%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,713,742	T→G	6.1%	intergenic (+11/‑91)	tsaB → / → PP_1508	endopeptidase/hypothetical protein
RA	1,713,747	T→A	5.8%	intergenic (+16/‑86)	tsaB → / → PP_1508	endopeptidase/hypothetical protein
RA	1,713,752	C→A	6.6%	intergenic (+21/‑81)	tsaB → / → PP_1508	endopeptidase/hypothetical protein
RA	1,759,133	A→T	6.7%	Q99L (CAA→CTA)	PP_1565 →	HK97 family portal protein
RA	1,772,788	C→G	7.3%	intergenic (+71/‑30)	PP_1580 → / → PP_1581	hypothetical protein/BNR domain‑containing protein
RA	1,777,524	C→G	6.6%	intergenic (+258/+34)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,777,525	C→G	5.8%	intergenic (+259/+33)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,786,022	T→A	6.2%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,024	T→A	6.4%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,808,088	A→C	6.0%	K47Q (AAG→CAG) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,089	A→T	6.8%	K47M (AAG→ATG) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,090	G→T	6.6%	K47N (AAG→AAT) ‡	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,098	T→A	6.2%	I50N (ATC→AAC)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,278	A→G	7.4%	D110G (GAC→GGC)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,819,789	Δ1 bp	5.1%	intergenic (+26/‑449)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,791	T→A	5.0%	intergenic (+28/‑447)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,831,780	T→C	5.9%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,835,637	A→G	7.3%	intergenic (‑79/+53)	PP_1639 ← / ← yohC	SprT family protein/inner membrane protein
RA	1,835,646	T→C	5.3%	intergenic (‑88/+44)	PP_1639 ← / ← yohC	SprT family protein/inner membrane protein
RA	1,835,648	C→A	5.6%	intergenic (‑90/+42)	PP_1639 ← / ← yohC	SprT family protein/inner membrane protein
RA	1,835,656	C→T	6.6%	intergenic (‑98/+34)	PP_1639 ← / ← yohC	SprT family protein/inner membrane protein
RA	1,859,398	G→C	7.9%	T4S (ACT→AGT) ‡	PP_1662 ←	hypothetical protein
RA	1,859,399	T→A	7.9%	T4S (ACT→TCT) ‡	PP_1662 ←	hypothetical protein
RA	1,859,400	G→C	7.8%	H3Q (CAC→CAG)	PP_1662 ←	hypothetical protein
RA	1,875,963	T→C	6.7%	G229G (GGT→GGC)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,965	A→G	6.8%	D230G (GAT→GGT)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,968	C→T	7.7%	T231I (ACC→ATC)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,875,970	G→A	7.7%	A232T (GCC→ACC)	cobS →	adenosylcobinamide‑GDP ribazoletransferase
RA	1,886,876	A→G	5.9%	S1133P (TCA→CCA)	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,886,878	G→A	5.6%	A1132V (GCA→GTA)	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,886,883	T→C	5.7%	V1130V (GTA→GTG) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,886,885	C→T	5.7%	V1130I (GTA→ATA) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,358	C→A	5.2%	L305L (CTG→CTT) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,359	A→T	5.2%	L305Q (CTG→CAG) ‡	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,889,362	A→T	5.2%	M304K (ATG→AAG)	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,892,526	C→G	6.3%	intergenic (+36/‑59)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,527	T→C	6.4%	intergenic (+37/‑58)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,528	G→A	6.4%	intergenic (+38/‑57)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,898,647	T→C	6.6%	intergenic (+53/‑118)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,650	G→A	6.6%	intergenic (+56/‑115)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,651	A→G	6.6%	intergenic (+57/‑114)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,660	T→C	7.1%	intergenic (+66/‑105)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,899,807	A→T	8.6%	K120* (AAG→TAG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,899,808	A→T	8.6%	K120M (AAG→ATG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,900,704:1	+T	7.8%	coding (1255/4026 nt)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,900,710	Δ1 bp	7.5%	coding (1261/4026 nt)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,905,399	C→T	5.8%	P552S (CCG→TCG)	nirB →	nitrite reductase large subunit
RA	1,905,401	Δ1 bp	5.8%	coding (1656/2553 nt)	nirB →	nitrite reductase large subunit
RA	1,905,407:1	+C	6.6%	coding (1662/2553 nt)	nirB →	nitrite reductase large subunit
RA	1,905,409	A→G	5.9%	D555G (GAC→GGC)	nirB →	nitrite reductase large subunit
RA	1,905,984	C→A	5.2%	R747S (CGC→AGC)	nirB →	nitrite reductase large subunit
RA	1,916,385	G→C	5.5%	intergenic (+87/‑28)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,921,549	T→A	10.9%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,550	T→A	17.3%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,932,638:1	+C	100%	intergenic (‑105/+45)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,948,117	T→A	6.0%	H513L (CAC→CTC)	PP_1749 ←	acetyltransferase
RA	1,962,576	G→C	5.0%	S280T (AGT→ACT)	PP_1760 →	ABC transporter ATP‑binding protein
RA	1,962,581	C→A	5.1%	R282S (CGT→AGT) ‡	PP_1760 →	ABC transporter ATP‑binding protein
RA	1,962,583	T→G	5.0%	R282R (CGT→CGG) ‡	PP_1760 →	ABC transporter ATP‑binding protein
RA	1,962,588	G→C	5.1%	S284T (AGT→ACT)	PP_1760 →	ABC transporter ATP‑binding protein
RA	1,973,871	A→T	6.8%	intergenic (+28/‑120)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,973,872	A→T	5.8%	intergenic (+29/‑119)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,987,992	C→A	6.3%	R152R (CGC→CGA)	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	1,987,993	G→C	6.5%	V153L (GTC→CTC) ‡	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	1,987,994	T→G	6.5%	V153G (GTC→GGC) ‡	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	2,015,255	A→T	5.3%	V78D (GTC→GAC)	PP_1794 ←	hypothetical protein
RA	2,015,258	A→T	5.3%	I77N (ATC→AAC)	PP_1794 ←	hypothetical protein
RA	2,025,713	A→C	5.5%	Q238P (CAG→CCG) ‡	wbpZ →	glycosyl transferase
RA	2,025,714	G→T	5.5%	Q238H (CAG→CAT) ‡	wbpZ →	glycosyl transferase
RA	2,031,374	C→A	6.1%	intergenic (+47/+28)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,038,564	G→A	5.8%	L306L (CTG→TTG)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,049,303	G→T	8.7%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,049,304	A→C	9.0%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,052,784	G→T	7.0%	intergenic (+16/+34)	prmB → / ← PP_1828	N5‑glutamine S‑adenosyl‑L‑methionine‑dependent methyltransferase/hypothetical protein
RA	2,052,785	A→T	6.1%	intergenic (+17/+33)	prmB → / ← PP_1828	N5‑glutamine S‑adenosyl‑L‑methionine‑dependent methyltransferase/hypothetical protein
RA	2,052,786	A→C	6.0%	intergenic (+18/+32)	prmB → / ← PP_1828	N5‑glutamine S‑adenosyl‑L‑methionine‑dependent methyltransferase/hypothetical protein
RA	2,053,627	T→C	6.3%	intergenic (‑27/+39)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,087,220	T→C	10.0%	intergenic (+33/+885)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,222	G→A	9.9%	intergenic (+35/+883)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,223	T→C	9.8%	intergenic (+36/+882)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,225	G→A	10.1%	intergenic (+38/+880)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,098,760	A→T	5.0%	I377N (ATT→AAT)	PP_1875 ←	two‑component system sensor histidine kinase/response regulator
RA	2,101,386	G→C	7.8%	T135T (ACG→ACC)	msrC →	free methionine‑(R)‑sulfoxide reductase
RA	2,139,622	T→G	8.2%	Q167H (CAA→CAC)	PP_5481 ←	hypothetical protein
RA	2,139,628	A→T	8.8%	R165R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,631	A→T	8.1%	R164R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,637	C→A	7.0%	Q162H (CAG→CAT)	PP_5481 ←	hypothetical protein
RA	2,163,435	T→A	6.3%	I99N (ATT→AAT)	PP_5482 →	hypothetical protein
RA	2,168,077	T→C	5.1%	F381L (TTT→CTT)	PP_1921 →	hypothetical protein
RA	2,173,009	T→A	8.2%	Q165H (CAA→CAT) ‡	PP_1925 ←	monooxygenase
RA	2,173,010	T→A	8.1%	Q165L (CAA→CTA) ‡	PP_1925 ←	monooxygenase
RA	2,189,641	A→C	7.8%	N170H (AAC→CAC)	PP_1937 →	helicase
RA	2,189,646	G→T	8.2%	V171V (GTG→GTT)	PP_1937 →	helicase
RA	2,193,088	G→A	6.2%	intergenic (+182/‑241)	PP_1938 → / → PP_1939	hypothetical protein/hypothetical protein
RA	2,193,090	A→T	6.3%	intergenic (+184/‑239)	PP_1938 → / → PP_1939	hypothetical protein/hypothetical protein
RA	2,193,092	T→C	6.4%	intergenic (+186/‑237)	PP_1938 → / → PP_1939	hypothetical protein/hypothetical protein
RA	2,207,599	G→A	5.4%	G344R (GGG→AGG)	PP_1950 →	hypothetical protein
RA	2,224,832	C→G	5.8%	E601Q (GAG→CAG)	PP_1963 ←	hypothetical protein
RA	2,224,834	A→G	6.0%	I600T (ATT→ACT)	PP_1963 ←	hypothetical protein
RA	2,246,241	C→T	7.9%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,246,242	A→G	7.9%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,273,080	C→T	13.4%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,281,632	G→C	7.1%	G152R (GGC→CGC) ‡	PP_2009 →	1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,281,633	G→C	7.1%	G152A (GGC→GCC) ‡	PP_2009 →	1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,282,770	T→G	34.5%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,774	G→C	40.0%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,775	G→C	40.0%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,779	C→A	40.0%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,290,396	C→T	8.1%	intergenic (+21/‑254)	pepN → / → PP_2018	aminopeptidase N/BNR domain‑containing protein
RA	2,295,860	C→A	9.3%	intergenic (+106/+27)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,307,274	A→T	5.6%	L119Q (CTG→CAG)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,307,279	G→A	5.7%	L117L (CTC→CTT)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,313,687	A→T	6.2%	I134N (ATT→AAT)	benE‑I ←	benzoate transport protein
RA	2,335,607	G→T	5.8%	L284M (CTG→ATG)	PP_2052 ←	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
RA	2,335,608	C→G	5.8%	M283I (ATG→ATC) ‡	PP_2052 ←	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
RA	2,335,609	A→C	6.7%	M283R (ATG→AGG) ‡	PP_2052 ←	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
RA	2,336,497	C→T	13.8%	intergenic (‑41/+39)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,498	A→T	14.3%	intergenic (‑42/+38)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,499	A→G	14.3%	intergenic (‑43/+37)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,344,688:1	+C	5.5%	intergenic (‑39/+36)	PP_2061 ← / ← PP_2062	hypothetical protein/hypothetical protein
RA	2,344,693	T→G	5.7%	intergenic (‑44/+31)	PP_2061 ← / ← PP_2062	hypothetical protein/hypothetical protein
RA	2,357,137	C→A	6.5%	G81W (GGG→TGG)	PP_2071 ←	hypothetical protein
RA	2,371,276	A→C	5.8%	N1365T (AAC→ACC) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,371,277	C→G	5.8%	N1365K (AAC→AAG) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,371,278	G→T	5.9%	V1366L (GTG→TTG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,378,650	G→C	5.2%	V69L (GTT→CTT) ‡	PP_2086 →	CrfX family protein
RA	2,378,651	T→A	5.2%	V69D (GTT→GAT) ‡	PP_2086 →	CrfX family protein
RA	2,393,915	T→G	6.0%	intergenic (+41/+65)	PP_2097 → / ← dacB	sensory box protein/D‑alanyl‑D‑alanine carboxypeptidase
RA	2,403,012	A→T	8.1%	F17Y (TTC→TAC)	PP_2105 ←	hypothetical protein
RA	2,415,307	C→T	9.1%	intergenic (+43/‑18)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,310	A→T	9.0%	intergenic (+46/‑15)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,312	A→T	8.6%	intergenic (+48/‑13)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,314	A→T	8.7%	intergenic (+50/‑11)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,415,317	A→G	8.9%	intergenic (+53/‑8)	tusA‑II → / → pdxB	sulfurtransferase/erythronate‑4‑phosphate dehydrogenase
RA	2,416,554	A→T	14.7%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,555	A→T	13.5%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,421,568	G→A	7.7%	G127R (GGG→AGG) ‡	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,421,570	G→C	7.7%	G127G (GGG→GGC) ‡	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,421,572	T→C	7.8%	L128P (CTG→CCG)	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,421,579	Δ1 bp	5.7%	coding (390/540 nt)	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,424,381	G→C	7.0%	intergenic (‑206/‑9)	PP_2124 ← / → yegS	glycosyl transferase/lipid kinase
RA	2,447,418	G→C	6.8%	L269L (CTG→CTC)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,456,055	C→G	5.8%	A257G (GCC→GGC)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,057	T→A	5.6%	C258S (TGC→AGC) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,059	C→G	5.6%	C258W (TGC→TGG) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,467,904	C→T	6.3%	P265L (CCG→CTG)	queF →	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase
RA	2,467,909	A→G	6.6%	S267G (AGC→GGC)	queF →	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase
RA	2,469,842	T→C	7.2%	intergenic (+11/+24)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,844	G→A	7.1%	intergenic (+13/+22)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,851	A→T	6.9%	intergenic (+20/+15)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,852	A→T	6.0%	intergenic (+21/+14)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,853	A→T	5.9%	intergenic (+22/+13)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,860	T→C	7.3%	intergenic (+29/+6)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,469,862	G→A	6.1%	intergenic (+31/+4)	vacJ → / ← PP_2164	lipoprotein VacJ/hypothetical protein
RA	2,486,181	C→G	5.7%	A258G (GCC→GGC)	spuC‑I →	polyamine:pyruvate transaminase
RA	2,486,810	A→G	7.8%	intergenic (+43/‑141)	spuC‑I → / → PP_2181	polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator
RA	2,486,819	C→G	7.0%	intergenic (+52/‑132)	spuC‑I → / → PP_2181	polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator
RA	2,486,820	T→C	7.0%	intergenic (+53/‑131)	spuC‑I → / → PP_2181	polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator
RA	2,486,822	C→G	7.1%	intergenic (+55/‑129)	spuC‑I → / → PP_2181	polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator
RA	2,489,129	C→T	7.8%	D42D (GAC→GAT)	PP_2184 →	formate dehydrogenase subunit beta
RA	2,489,130	A→G	7.8%	I43V (ATC→GTC)	PP_2184 →	formate dehydrogenase subunit beta
RA	2,499,711	G→T	5.6%	D538Y (GAC→TAC)	PP_2193 →	ferric siderophore receptor
RA	2,502,985	A→T	7.7%	S94C (AGC→TGC)	speB →	agmatinase
RA	2,502,991	A→G	7.1%	T96A (ACG→GCG) ‡	speB →	agmatinase
RA	2,502,992	C→T	9.7%	T96M (ACG→ATG) ‡	speB →	agmatinase
RA	2,502,998	A→T	9.5%	Q98L (CAG→CTG)	speB →	agmatinase
RA	2,559,448	G→A	9.2%	D570N (GAT→AAT) ‡	fepA →	ferric enterobactin transport system outer membrane subunit
RA	2,559,449	A→T	9.2%	D570V (GAT→GTT) ‡	fepA →	ferric enterobactin transport system outer membrane subunit
RA	2,559,450	T→C	8.9%	D570D (GAT→GAC) ‡	fepA →	ferric enterobactin transport system outer membrane subunit
RA	2,621,330	G→C	8.5%	D49H (GAT→CAT)	PP_2294 →	hypothetical protein
RA	2,633,457	T→G	6.3%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,458	C→A	6.3%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,649,769	C→T	7.8%	P229L (CCG→CTG)	PP_2320 →	hypothetical protein
RA	2,670,775	A→T	7.5%	S515T (TCC→ACC)	acnB ←	aconitate hydratase B
RA	2,670,776	A→T	8.7%	G514G (GGT→GGA)	acnB ←	aconitate hydratase B
RA	2,678,019	A→G	5.5%	Q120Q (CAA→CAG)	PP_2348 →	sensor histidine kinase
RA	2,678,020	C→T	5.6%	L121L (CTG→TTG)	PP_2348 →	sensor histidine kinase
RA	2,678,029	C→T	7.8%	L124L (CTG→TTG) ‡	PP_2348 →	sensor histidine kinase
RA	2,678,031	G→C	5.4%	L124L (CTG→CTC) ‡	PP_2348 →	sensor histidine kinase
RA	2,678,034	T→G	6.1%	R125R (CGT→CGG)	PP_2348 →	sensor histidine kinase
RA	2,690,884	A→C	6.4%	D75A (GAC→GCC)	PP_2357 →	type I pili subunit CsuB
RA	2,699,833	G→C	5.7%	P226P (CCC→CCG) ‡	fsr‑II ←	fosmidomycin efflux system
RA	2,699,834	G→C	5.7%	P226R (CCC→CGC) ‡	fsr‑II ←	fosmidomycin efflux system
RA	2,699,835	G→C	5.7%	P226A (CCC→GCC) ‡	fsr‑II ←	fosmidomycin efflux system
RA	2,703,428	T→G	7.0%	A195A (GCT→GCG)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,703,431	A→G	7.3%	A196A (GCA→GCG)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,703,434	C→T	8.1%	I197I (ATC→ATT)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,703,437	C→A	9.2%	A198A (GCC→GCA)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,744,519	C→T	6.2%	Q20* (CAG→TAG)	PP_2399 →	hypothetical protein
RA	2,755,706	A→G	6.2%	I678V (ATT→GTT)	czcA‑II →	cation efflux system protein
RA	2,770,228	G→A	5.9%	intergenic (‑94/+15)	PP_2422 ← / ← lpxOA	hypothetical protein/Fe(2+)/alpha‑ketoglutarate‑dependent dioxygenase
RA	2,774,810	T→C	8.2%	P234P (CCA→CCG) ‡	PP_5521 ←	hypothetical protein
RA	2,774,811	G→C	8.4%	P234R (CCA→CGA) ‡	PP_5521 ←	hypothetical protein
RA	2,774,812	G→A	8.9%	P234S (CCA→TCA) ‡	PP_5521 ←	hypothetical protein
RA	2,776,107	A→C	7.8%	K152Q (AAG→CAG)	sotB →	sugar efflux transporter
RA	2,776,840	T→C	5.0%	V396A (GTT→GCT) ‡	sotB →	sugar efflux transporter
RA	2,776,841	T→G	5.0%	V396V (GTT→GTG) ‡	sotB →	sugar efflux transporter
RA	2,796,619	G→C	6.7%	intergenic (+52/‑121)	PP_t42 → / → PP_t43	tRNA‑Val/tRNA‑Val
RA	2,796,624	G→T	7.3%	intergenic (+57/‑116)	PP_t42 → / → PP_t43	tRNA‑Val/tRNA‑Val
RA	2,796,627	A→C	7.2%	intergenic (+60/‑113)	PP_t42 → / → PP_t43	tRNA‑Val/tRNA‑Val
RA	2,804,385	G→C	8.5%	V66V (GTG→GTC)	rbsR →	DNA‑binding transcriptional repressor
RA	2,810,098	A→C	11.9%	M169L (ATG→CTG) ‡	thrS →	threonine‑‑tRNA ligase
RA	2,810,099	T→A	13.2%	M169K (ATG→AAG) ‡	thrS →	threonine‑‑tRNA ligase
RA	2,810,100	G→T	12.1%	M169I (ATG→ATT) ‡	thrS →	threonine‑‑tRNA ligase
RA	2,825,091	G→A	8.7%	G235D (GGC→GAC)	PP_2478 →	isoquinoline 1‑oxidoreductase subunit beta
RA	2,865,329	G→C	8.3%	S18R (AGC→AGG) ‡	gllP ←	porin‑like protein
RA	2,865,331	T→A	8.3%	S18C (AGC→TGC) ‡	gllP ←	porin‑like protein
RA	2,865,333	G→C	8.6%	A17G (GCC→GGC)	gllP ←	porin‑like protein
RA	2,866,221	C→T	8.7%	V186I (GTC→ATC)	glllA ←	gallate dioxygenase
RA	2,866,222	G→C	8.8%	I185M (ATC→ATG) ‡	glllA ←	gallate dioxygenase
RA	2,866,223	A→G	8.8%	I185T (ATC→ACC) ‡	glllA ←	gallate dioxygenase
RA	2,885,718	T→G	10.9%	E54A (GAG→GCG)	PP_2541 ←	transcriptional factor‑like protein
RA	2,885,724	A→T	10.4%	L52Q (CTG→CAG)	PP_2541 ←	transcriptional factor‑like protein
RA	2,885,730	C→A	10.9%	R50L (CGC→CTC)	PP_2541 ←	transcriptional factor‑like protein
RA	2,907,691	T→A	15.6%	Q335L (CAG→CTG)	hasE ←	secretion metalloprotease
RA	2,907,694	A→C	14.1%	L334R (CTG→CGG)	hasE ←	secretion metalloprotease
RA	2,907,697	G→T	14.0%	P333Q (CCG→CAG)	hasE ←	secretion metalloprotease
RA	2,907,700	T→A	14.9%	Q332L (CAG→CTG)	hasE ←	secretion metalloprotease
RA	2,921,460	G→A	100%	G3494R (GGG→AGG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,945,617	Δ1 bp	12.5%	coding (394/531 nt)	PP_2578 →	hypothetical protein
RA	2,945,621:1	+C	12.1%	coding (398/531 nt)	PP_2578 →	hypothetical protein
RA	2,946,587	G→C	8.8%	P312R (CCG→CGG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,946,588	G→C	9.0%	P312A (CCG→GCG) ‡	yijP ←	phosphoethanolamine transferase CptA
RA	2,962,486	Δ1 bp	8.2%	coding (508/777 nt)	PP_2592 ←	ferric siderophore ABC transporter ATP‑binding protein
RA	2,973,809	A→G	9.9%	L22P (CTG→CCG)	PP_2600 ←	hypothetical protein
RA	2,982,692	C→G	7.2%	G163R (GGT→CGT)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,982,697	C→G	6.2%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,989,215	G→T	7.3%	R43R (CGG→AGG)	PP_2613 ←	hypothetical protein
RA	2,989,218	A→C	7.1%	Y42D (TAT→GAT)	PP_2613 ←	hypothetical protein
RA	3,008,313	A→G	7.7%	M261T (ATG→ACG)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,008,318	C→T	7.7%	S259S (TCG→TCA)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,010,482	G→A	5.8%	intergenic (‑1388/‑280)	PP_2628 ← / → PP_2631	ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT
RA	3,013,216	G→A	6.5%	G151E (GGG→GAG)	PP_2634 →	cellulose synthase
RA	3,013,218:1	+G	6.5%	coding (454/708 nt)	PP_2634 →	cellulose synthase
RA	3,013,224	Δ1 bp	5.3%	coding (460/708 nt)	PP_2634 →	cellulose synthase
RA	3,021,444	G→A	6.5%	R661Q (CGG→CAG)	PP_2638 →	cellulose synthase operon protein C
RA	3,021,449	A→G	6.6%	M663V (ATG→GTG)	PP_2638 →	cellulose synthase operon protein C
RA	3,024,211	A→T	6.2%	intergenic (+26/+128)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,048,361	C→A	5.5%	S139Y (TCC→TAC)	PP_2661 →	hypothetical protein
RA	3,054,732	C→G	13.1%	intergenic (‑207/+101)	PP_2666 ← / ← PP_2667	hypothetical protein/ABC transporter permease
RA	3,054,733	A→C	13.2%	intergenic (‑208/+100)	PP_2666 ← / ← PP_2667	hypothetical protein/ABC transporter permease
RA	3,057,798	A→T	6.1%	Y258* (TAT→TAA)	PP_5538 ←	ABC transporter substrate‑binding protein
RA	3,118,002	T→C	10.2%	T194A (ACC→GCC)	cfa ←	cyclopropane‑fatty‑acyl‑phospholipid synthase
RA	3,126,848	G→T	5.8%	H193N (CAC→AAC)	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,126,856	G→C	8.4%	A190G (GCC→GGC)	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,126,864	A→C	6.0%	F187L (TTT→TTG) ‡	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,126,866	A→C	6.0%	F187V (TTT→GTT) ‡	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,173,790	G→C	7.9%	intergenic (+11/‑40)	PP_2785 → / → PP_2786	hypothetical protein/hypothetical protein
RA	3,183,689	G→A	7.3%	V59V (GTG→GTA)	PP_2794 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,190,727	C→T	7.3%	intergenic (‑78/+18)	PP_2799 ← / ← PP_2800	class III aminotransferase/diaminobutyrate‑2‑oxoglutarate transaminase
RA	3,201,679	T→A	6.8%	V336E (GTA→GAA) ‡	PP_2808 →	oxidoreductase
RA	3,201,680	A→C	5.8%	V336V (GTA→GTC) ‡	PP_2808 →	oxidoreductase
RA	3,203,420	C→T	9.1%	A57A (GCC→GCT)	PP_2810 →	hypothetical protein
RA	3,203,423	T→A	8.7%	S58R (AGT→AGA)	PP_2810 →	hypothetical protein
RA	3,203,424	T→A	9.1%	S59T (TCT→ACT)	PP_2810 →	hypothetical protein
RA	3,203,427	A→G	9.2%	S60G (AGC→GGC)	PP_2810 →	hypothetical protein
RA	3,211,888	T→G	7.4%	S309A (TCA→GCA) ‡	PP_2815 →	hypothetical protein
RA	3,211,889	C→A	7.4%	S309* (TCA→TAA) ‡	PP_2815 →	hypothetical protein
RA	3,220,272	T→A	7.1%	K247I (AAA→ATA)	PP_5539 ←	hypothetical protein
RA	3,229,981	C→A	5.7%	intergenic (+79/+49)	PP_2829 → / ← PP_2830	GntR family transcriptional regulator/MFS transporter
RA	3,266,111	G→C	10.5%	intergenic (+28/+31)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,113	A→T	10.5%	intergenic (+30/+29)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,114	A→T	10.5%	intergenic (+31/+28)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,116	G→C	10.0%	intergenic (+33/+26)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,278,095	A→C	6.3%	L9R (CTT→CGT) ‡	ampC ←	beta‑lactamase
RA	3,278,096	G→T	6.3%	L9I (CTT→ATT) ‡	ampC ←	beta‑lactamase
RA	3,292,859	G→C	5.1%	G715R (GGC→CGC)	PP_2893 →	hypothetical protein
RA	3,324,985	Δ1 bp	6.1%	coding (149/1251 nt)	PP_2924 ←	hypothetical protein
RA	3,327,193	A→C	7.3%	L338R (CTG→CGG)	udg ←	UDP‑glucose 6‑dehydrogenase
RA	3,327,200	G→T	7.7%	R336R (CGG→AGG)	udg ←	UDP‑glucose 6‑dehydrogenase
RA	3,331,048	G→C	6.3%	F318L (TTC→TTG) ‡	nspC ←	carboxynorspermidine/carboxyspermidine decarboxylase
RA	3,331,050	A→T	6.7%	F318I (TTC→ATC) ‡	nspC ←	carboxynorspermidine/carboxyspermidine decarboxylase
RA	3,346,435	T→C	8.8%	E22G (GAG→GGG)	PP_2942 ←	two‑component system response regulator
RA	3,350,908	T→A	6.4%	intergenic (+1/‑157)	PP_2945 → / → arfB	two‑component system sensor histidine kinase/response regulator/peptidyl‑tRNA hydrolase
RA	3,355,865	T→C	19.2%	intergenic (‑34/+92)	PP_2951 ← / ← PP_2952	TetR family transcriptional regulator/LysR family transcriptional regulator
RA	3,380,536	A→G	7.0%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,540	T→A	9.2%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,544	C→T	9.1%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,391,521	G→C	6.8%	W244S (TGG→TCG)	PP_2994 →	FMN‑binding oxidoreductase
RA	3,431,918	A→G	7.4%	A187A (GCA→GCG)	PP_3047 →	hypothetical protein
RA	3,466,055	G→C	6.4%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,056	A→T	6.6%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,057	A→T	6.6%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,058	G→C	6.6%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,210	A→C	6.0%	G13G (GGT→GGG)	PP_5559 ←	hypothetical protein
RA	3,489,766	G→C	5.3%	A542G (GCG→GGG)	clpV ←	protein ClpV1
RA	3,489,778	G→C	6.2%	P538R (CCA→CGA)	clpV ←	protein ClpV1
RA	3,498,264	C→G	9.8%	intergenic (‑668/+38)	PP_5562 ← / ← PP_5563	hypothetical protein/membrane protein
RA	3,528,905	A→G	9.7%	D241G (GAC→GGC)	dnaEB →	error‑prone DNA polymerase
RA	3,528,908	T→A	9.3%	L242Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,911	T→A	9.3%	L243Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,914	C→T	9.3%	A244V (GCC→GTC)	dnaEB →	error‑prone DNA polymerase
RA	3,540,955	T→C	5.9%	L23P (CTG→CCG)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,558,242	A→G	5.2%	K181E (AAG→GAG)	PP_3142 →	sugar transferase
RA	3,578,428	T→A	9.8%	intergenic (+105/‑219)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,578,429	T→A	7.1%	intergenic (+106/‑218)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,578,431	T→A	7.1%	intergenic (+108/‑216)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,584,898	G→T	7.0%	intergenic (+45/‑90)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,584,899	A→C	8.4%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,610,954	G→A	5.8%	G910G (GGC→GGT)	mcoA ←	Mn(II) copper oxidase A
RA	3,632,085	G→T	6.5%	E327* (GAG→TAG) ‡	PP_5590 →	hypothetical protein
RA	3,632,086	A→C	7.9%	E327A (GAG→GCG) ‡	PP_5590 →	hypothetical protein
RA	3,637,742	A→C	6.5%	I108L (ATC→CTC)	PP_3204 →	hypothetical protein
RA	3,650,718	T→A	6.1%	Q35H (CAA→CAT)	PP_3216 ←	cysteine dioxygenase
RA	3,653,195	C→A	5.9%	Q361K (CAG→AAG) ‡	PP_3218 →	NtaA/SnaA/SoxA family monooxygenase
RA	3,653,197	G→C	5.9%	Q361H (CAG→CAC) ‡	PP_3218 →	NtaA/SnaA/SoxA family monooxygenase
RA	3,653,199	T→G	6.0%	L362* (TTA→TGA)	PP_3218 →	NtaA/SnaA/SoxA family monooxygenase
RA	3,686,784	A→T	6.4%	I398L (ATA→TTA)	PP_3251 →	hypothetical protein
RA	3,697,444	G→A	7.3%	S15S (AGC→AGT) ‡	PP_5595 ←	hypothetical protein
RA	3,697,445	C→G	7.2%	S15T (AGC→ACC) ‡	PP_5595 ←	hypothetical protein
RA	3,697,446	T→C	7.2%	S15G (AGC→GGC) ‡	PP_5595 ←	hypothetical protein
RA	3,717,845	T→G	10.0%	N250H (AAC→CAC)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,717,846	C→A	8.7%	V249V (GTG→GTT)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,722,899	G→C	6.0%	V52V (GTG→GTC)	PP_3288 →	universal stress protein family protein
RA	3,722,901	A→T	6.1%	N53I (AAT→ATT)	PP_3288 →	universal stress protein family protein
RA	3,722,903	G→C	6.1%	D54H (GAC→CAC)	PP_3288 →	universal stress protein family protein
RA	3,733,263	T→A	10.2%	intergenic (‑23/‑49)	PP_3299 ← / → PP_3300	lipoprotein/Transcriptional regulator, tetR family
RA	3,733,265	T→A	9.7%	intergenic (‑25/‑47)	PP_3299 ← / → PP_3300	lipoprotein/Transcriptional regulator, tetR family
RA	3,733,270	T→A	9.8%	intergenic (‑30/‑42)	PP_3299 ← / → PP_3300	lipoprotein/Transcriptional regulator, tetR family
RA	3,733,272	T→A	9.9%	intergenic (‑32/‑40)	PP_3299 ← / → PP_3300	lipoprotein/Transcriptional regulator, tetR family
MC JC	3,733,549	Δ59,784 bp	100%		[PP_3300]–[PP_3355]	55 genes [PP_3300], PP_3301, PP_3302, PP_3303, PP_3304, PP_3305, PP_3306, PP_3307, paoA, paoB, paoC, kefB‑II, PP_3312, PP_3313, PP_3314, PP_3315, PP_3316, PP_3317, PP_3318, PP_3319, PP_3320, PP_3321, hemBB, PP_3323, folEB, PP_3325, PP_3326, PP_3328, PP_5599, PP_3329, PP_5600, PP_3330, PP_3331, PP_3332, PP_3333, PP_5743, PP_3335, PP_3336, PP_3337, PP_3338, PP_3339, PP_3340, nikR, nikA, nikB, nikC, nikD, nikE, PP_3348, mhpT, PP_3350, atsA, PP_3353, PP_3354, [PP_3355]
RA	3,797,501	A→T	6.2%	C165S (TGC→AGC)	vdh ←	vanillin dehydrogenase
RA	3,797,506	A→T	8.4%	L163Q (CTG→CAG)	vdh ←	vanillin dehydrogenase
RA	3,804,019	T→C	7.9%	intergenic (‑103/‑41)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,020	C→G	11.0%	intergenic (‑104/‑40)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,021	C→G	7.4%	intergenic (‑105/‑39)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,022	G→A	7.8%	intergenic (‑106/‑38)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,825,280	T→A	6.4%	T256S (ACC→TCC)	ptxS ←	2‑ketogluconate utilization repressor
RA	3,835,980	G→C	5.6%	W156C (TGG→TGC)	PP_3387 →	hypothetical protein
RA	3,843,401	T→G	5.7%	I26L (ATC→CTC)	PP_3392 ←	hypothetical protein
RA	3,845,703:1	+G	100%	intergenic (‑70/+28)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,882,813	A→G	10.5%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,893,482	G→A	6.9%	E282E (GAG→GAA)	rarD →	chloramphenicol‑sensitive protein
RA	3,893,484	G→C	6.9%	G283A (GGC→GCC)	rarD →	chloramphenicol‑sensitive protein
RA	3,893,486	T→C	7.0%	F284L (TTC→CTC)	rarD →	chloramphenicol‑sensitive protein
RA	3,915,472	G→C	5.7%	K147N (AAG→AAC)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,951,150	T→G	9.8%	intergenic (‑114/+81)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,159	T→C	100%	intergenic (‑123/+72)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,161	A→T	100%	intergenic (‑125/+70)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,976,400	G→C	6.9%	R156R (CGC→CGG)	PP_3506 ←	magnesium chelatase subunit ChII
RA	3,983,830	T→G	6.4%	C282G (TGC→GGC) ‡	ilvE →	branched‑chain‑amino acid aminotransferase
RA	3,983,831	G→C	6.1%	C282S (TGC→TCC) ‡	ilvE →	branched‑chain‑amino acid aminotransferase
RA	3,984,040	G→T	8.3%	intergenic (+34/+156)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,041	C→T	8.3%	intergenic (+35/+155)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,042	A→G	7.1%	intergenic (+36/+154)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,043	A→C	8.5%	intergenic (+37/+153)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,995,333	T→G	8.6%	intergenic (‑98/+52)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	3,995,334	A→T	8.2%	intergenic (‑99/+51)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	3,995,335	C→A	8.6%	intergenic (‑100/+50)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	4,022,306	G→C	6.9%	intergenic (‑1/+667)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,022,307	G→C	6.9%	intergenic (‑2/+666)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,049,742	A→C	8.1%	S765R (AGC→CGC)	quiA →	quinate dehydrogenase
RA	4,049,746	A→C	7.7%	Q766P (CAG→CCG) ‡	quiA →	quinate dehydrogenase
RA	4,049,747	G→T	8.0%	Q766H (CAG→CAT) ‡	quiA →	quinate dehydrogenase
RA	4,049,751	G→T	7.7%	G768C (GGC→TGC)	quiA →	quinate dehydrogenase
RA	4,051,047	C→G	5.1%	F360L (TTC→TTG)	oprB‑III →	carbohydrate‑selective porin
RA	4,054,193:1	+T	7.0%	coding (767/1320 nt)	PP_3573 →	monooxygenase
RA	4,054,198	Δ1 bp	7.2%	coding (772/1320 nt)	PP_3573 →	monooxygenase
RA	4,054,949	A→G	5.0%	Q60Q (CAA→CAG)	PP_3574 →	hypothetical protein
RA	4,066,004	G→T	5.2%	N1020K (AAC→AAA)	mdtC ←	multidrug transporter membrane protein
RA	4,081,173	C→G	7.3%	G255G (GGG→GGC)	dpkA ←	delta 1‑piperideine‑2‑carboxylate reductase
RA	4,082,621	G→C	5.4%	G189A (GGC→GCC)	PP_3592 →	RpiR family transcriptional regulator
RA	4,084,381	G→T	6.1%	D175Y (GAC→TAC)	PP_3594 →	amino acid ABC transporter permease
RA	4,090,056	C→G	9.5%	S36C (TCC→TGC) ‡	gudP →	glucarate transporter
RA	4,090,057	C→G	9.2%	S36S (TCC→TCG) ‡	gudP →	glucarate transporter
RA	4,096,065	A→G	8.3%	T133A (ACC→GCC)	PP_5607 →	membrane protein
RA	4,096,068	T→A	8.1%	L134M (TTG→ATG) ‡	PP_5607 →	membrane protein
RA	4,096,069	T→A	7.7%	L134* (TTG→TAG) ‡	PP_5607 →	membrane protein
RA	4,096,072	C→T	8.0%	A135V (GCC→GTC)	PP_5607 →	membrane protein
RA	4,106,356	G→C	5.6%	P206A (CCG→GCG)	PP_3613 ←	L‑sorbosone dehydrogenase
RA	4,106,357	G→C	6.2%	S205R (AGC→AGG)	PP_3613 ←	L‑sorbosone dehydrogenase
RA	4,119,486	C→A	7.6%	P726T (CCG→ACG)	PP_3622 →	isoquinoline 1‑oxidoreductase subunit beta
RA	4,132,430	T→A	6.7%	H244L (CAC→CTC)	PP_3636 ←	sulfonate ABC transporter substrate‑binding protein
RA	4,133,635	C→T	5.9%	A112T (GCG→ACG)	PP_3637 ←	sulfonate ABC transporter ATP‑binding protein
RA	4,133,977	T→A	8.1%	A351A (GCA→GCT) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,133,979	C→G	8.1%	A351P (GCA→CCA) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,133,981	T→A	8.1%	Q350L (CAG→CTG)	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,147,929	G→T	7.8%	G671V (GGC→GTC)	PP_3651 →	two‑component system sensor histidine kinase/response regulator
RA	4,160,661	G→C	5.7%	intergenic (+27/+94)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,160,662	G→C	5.7%	intergenic (+28/+93)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,162,108	G→A	11.1%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,218,755	G→T	11.6%	A181E (GCG→GAG)	PP_3698 ←	hypothetical protein
RA	4,221,187	G→T	6.4%	intergenic (+46/+216)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,189	A→T	5.5%	intergenic (+48/+214)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,191	A→C	5.3%	intergenic (+50/+212)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,240,144	T→A	5.2%	H49L (CAT→CTT)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,248,512	C→G	5.1%	L505L (CTG→CTC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,252,780	A→T	7.5%	L300H (CTC→CAC)	rocE ←	amino acid permease RocE
RA	4,260,591	A→G	5.8%	V724A (GTG→GCG)	PP_3734 ←	ABC transporter permease
RA	4,274,562	C→T	5.3%	G173G (GGC→GGT)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,564	T→A	5.0%	L174Q (CTG→CAG)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,566	A→G	5.5%	T175A (ACC→GCC)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,281,586	A→T	7.6%	intergenic (‑163/+555)	PP_3751 ← / ← PP_3753	cyanate transporter/AraC family transcriptional regulator
RA	4,283,412	A→G	5.5%	E5E (GAA→GAG)	bktB →	beta‑ketothiolase BktB
RA	4,289,020:1	+C	7.1%	coding (103/822 nt)	PP_3760 ←	methyltransferase
RA	4,289,025	Δ1 bp	7.1%	coding (98/822 nt)	PP_3760 ←	methyltransferase
RA	4,301,310	T→C	10.8%	S159P (TCT→CCT)	PP_3774 →	hypothetical protein
RA	4,301,313	G→T	10.5%	E160* (GAA→TAA) ‡	PP_3774 →	hypothetical protein
RA	4,301,314	A→C	10.5%	E160A (GAA→GCA) ‡	PP_3774 →	hypothetical protein
RA	4,301,317	G→A	10.1%	G161D (GGC→GAC)	PP_3774 →	hypothetical protein
RA	4,331,665	T→C	5.6%	L122P (CTT→CCT) ‡	PP_3803 →	cation ABC transporter permease
RA	4,331,666	T→A	5.6%	L122L (CTT→CTA) ‡	PP_3803 →	cation ABC transporter permease
RA	4,331,667	G→A	5.5%	G123S (GGC→AGC)	PP_3803 →	cation ABC transporter permease
RA	4,348,705	A→G	50.5%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,464	A→C	5.7%	V162G (GTC→GGC)	galU ←	UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,466	T→A	5.6%	E161D (GAA→GAT)	galU ←	UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,470	T→A	5.6%	Q160L (CAG→CTG)	galU ←	UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,474	T→A	5.5%	I159F (ATC→TTC)	galU ←	UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,476	G→T	5.6%	A158D (GCC→GAC)	galU ←	UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,351,736	A→G	7.8%	L5S (TTG→TCG)	PP_3823 ←	cytochrome c‑type protein
RA	4,360,762	G→A	12.5%	G120G (GGC→GGT) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,763	C→T	12.5%	G120D (GGC→GAC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,766	A→T	11.4%	I119N (ATT→AAT)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,769	A→G	11.6%	I118T (ATC→ACC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,770	T→C	11.6%	I118V (ATC→GTC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,363,969	T→G	7.1%	intergenic (+44/‑30)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,974	C→A	7.4%	intergenic (+49/‑25)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,375,669	G→A	6.0%	G100G (GGC→GGT)	PP_3851 ←	hypothetical protein
RA	4,403,826	T→C	9.8%	N71D (AAC→GAC)	PP_3883 ←	holin
RA	4,403,828	G→C	5.4%	T70S (ACC→AGC)	PP_3883 ←	holin
RA	4,403,831	C→T	5.5%	C69Y (TGC→TAC) ‡	PP_3883 ←	holin
RA	4,403,832	A→G	5.5%	C69R (TGC→CGC) ‡	PP_3883 ←	holin
RA	4,403,835	G→C	5.3%	L68V (CTG→GTG)	PP_3883 ←	holin
RA	4,403,837	G→A	5.2%	S67L (TCG→TTG)	PP_3883 ←	holin
RA	4,405,314	C→T	9.5%	G83R (GGG→AGG)	PP_3886 ←	hypothetical protein
RA	4,405,320	T→C	9.5%	M81V (ATG→GTG)	PP_3886 ←	hypothetical protein
RA	4,405,321	G→A	9.5%	H80H (CAC→CAT)	PP_3886 ←	hypothetical protein
RA	4,405,327	A→G	9.5%	P78P (CCT→CCC)	PP_3886 ←	hypothetical protein
RA	4,408,883	A→G	5.6%	Y12H (TAC→CAC)	PP_3892 ←	hypothetical protein
RA	4,423,090	G→C	9.2%	intergenic (‑143/‑23)	PP_5645 ← / → PP_3914	hypothetical protein/hypothetical protein
RA	4,423,807	A→T	6.0%	T14S (ACA→TCA) ‡	PP_3915 →	hypothetical protein
RA	4,423,809	A→T	7.0%	T14T (ACA→ACT) ‡	PP_3915 →	hypothetical protein
RA	4,442,207	C→A	9.3%	R108R (CGG→CGT) ‡	nicP‑II ←	porin‑like protein
RA	4,442,209	G→A	9.6%	R108W (CGG→TGG) ‡	nicP‑II ←	porin‑like protein
RA	4,442,210	G→T	11.0%	A107A (GCC→GCA)	nicP‑II ←	porin‑like protein
RA	4,442,213	A→C	8.6%	H106Q (CAT→CAG) ‡	nicP‑II ←	porin‑like protein
RA	4,442,214	T→C	9.6%	H106R (CAT→CGT) ‡	nicP‑II ←	porin‑like protein
RA	4,442,216	T→G	9.8%	E105D (GAA→GAC)	nicP‑II ←	porin‑like protein
RA	4,442,628	C→G	9.3%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,629	C→G	9.3%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,445,250	C→G	6.0%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,251	C→G	5.2%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,447,838:1	+T	6.8%	intergenic (‑274/‑48)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,843	C→G	8.1%	intergenic (‑279/‑43)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,848	Δ1 bp	7.9%	intergenic (‑284/‑38)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,468,367	G→T	5.3%	A204A (GCG→GCT)	PP_3959 →	voltage‑gated chloride channel family protein
RA	4,471,656	A→T	6.0%	intergenic (‑467/‑427)	PP_3961 ← / → PP_3962	transporter/hypothetical protein
RA	4,479,813	A→G	9.8%	P388P (CCA→CCG)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,819	T→A	9.3%	A390A (GCT→GCA)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,825	C→T	8.1%	P392P (CCC→CCT)	ybdR →	Zn‑dependent oxidoreductase
RA	4,488,991	A→G	7.6%	intergenic (+344/+227)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,488,992	C→G	7.6%	intergenic (+345/+226)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,488,993	C→T	7.5%	intergenic (+346/+225)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,501,297	A→T	8.2%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,501,300	A→T	8.2%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,502,238	C→A	5.1%	intergenic (+30/‑134)	yccA → / → xanP	FtsH‑mediated proteolysis substrate/modulator/xanthine permease
RA	4,503,789	C→T	26.1%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,790	A→G	26.1%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,507,371	A→T	9.3%	intergenic (+89/+18)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,507,372	A→T	9.3%	intergenic (+90/+17)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,507,373	A→T	9.3%	intergenic (+91/+16)	gqr → / ← cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,565	A→G	5.2%	G72G (GGT→GGC)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,516,189	C→G	5.8%	S18R (AGC→AGG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,516,192	C→G	6.1%	Y19* (TAC→TAG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,516,197	C→A	6.2%	P21Q (CCG→CAG)	ate →	arginyl‑tRNA‑‑protein transferase
RA	4,517,232	A→C	7.1%	intergenic (+69/+17)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,233	A→T	7.1%	intergenic (+70/+16)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,234	G→T	7.1%	intergenic (+71/+15)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,518,715	T→G	5.2%	K269Q (AAG→CAG)	clpA ←	ATP‑dependent serine protease
RA	4,520,454	A→T	7.4%	intergenic (+45/+27)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,520,464	A→G	11.1%	intergenic (+55/+17)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,522,239	T→G	7.4%	F30V (TTC→GTC) ‡	idh →	isocitrate dehydrogenase
RA	4,522,241	C→G	7.4%	F30L (TTC→TTG) ‡	idh →	isocitrate dehydrogenase
RA	4,522,243	C→A	7.2%	T31N (ACC→AAC)	idh →	isocitrate dehydrogenase
RA	4,530,025	T→A	14.9%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,026	T→A	13.1%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,574,227	G→C	8.1%	R300P (CGC→CCC) ‡	glgX →	glycogen debranching enzyme
RA	4,574,228	C→G	9.3%	R300R (CGC→CGG) ‡	glgX →	glycogen debranching enzyme
RA	4,574,229	G→C	9.0%	G301R (GGC→CGC)	glgX →	glycogen debranching enzyme
RA	4,576,047	T→C	8.5%	H148H (CAT→CAC)	ybhP‑II →	phosphohydrolase
RA	4,576,050	G→A	8.6%	A149A (GCG→GCA)	ybhP‑II →	phosphohydrolase
RA	4,576,052	T→A	8.7%	V150D (GTC→GAC)	ybhP‑II →	phosphohydrolase
RA	4,576,054	T→C	8.5%	C151R (TGC→CGC)	ybhP‑II →	phosphohydrolase
RA	4,576,057	G→A	8.6%	V152M (GTG→ATG)	ybhP‑II →	phosphohydrolase
RA	4,586,030	2 bp→TC	100%	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,033:1	+G	100%	intergenic (+116/+99)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,056:1	+C	100%	intergenic (+139/+76)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,599,285	T→C	10.6%	Y175C (TAC→TGC) ‡	PP_4071 ←	membrane protein
RA	4,599,286	A→C	10.6%	Y175D (TAC→GAC) ‡	PP_4071 ←	membrane protein
RA	4,599,290	G→C	11.6%	L173L (CTC→CTG)	PP_4071 ←	membrane protein
RA	4,599,296	C→A	12.2%	Q171H (CAG→CAT) ‡	PP_4071 ←	membrane protein
RA	4,599,297	T→G	11.8%	Q171P (CAG→CCG) ‡	PP_4071 ←	membrane protein
RA	4,599,303	G→C	9.2%	P169R (CCA→CGA)	PP_4071 ←	membrane protein
RA	4,599,307	G→T	9.5%	R168R (CGG→AGG)	PP_4071 ←	membrane protein
RA	4,599,308	G→A	9.5%	G167G (GGC→GGT)	PP_4071 ←	membrane protein
RA	4,603,666	A→T	6.1%	intergenic (+997/‑505)	PP_4074 → / → PP_4076	hypothetical protein/hypothetical protein
RA	4,614,791	T→G	6.2%	F388V (TTC→GTC)	PP_4085 →	rhs family protein
RA	4,614,794	T→C	6.8%	F389L (TTC→CTC)	PP_4085 →	rhs family protein
RA	4,614,805	G→A	8.4%	E392E (GAG→GAA)	PP_4085 →	rhs family protein
RA	4,614,808	C→A	7.8%	D393E (GAC→GAA)	PP_4085 →	rhs family protein
RA	4,635,709	C→T	100%	G16D (GGT→GAT)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,649,982	T→G	5.9%	H311P (CAC→CCC)	PP_4113 ←	hypothetical protein
RA	4,649,985	T→A	5.7%	K310M (AAG→ATG) ‡	PP_4113 ←	hypothetical protein
RA	4,649,986	T→A	5.7%	K310* (AAG→TAG) ‡	PP_4113 ←	hypothetical protein
RA	4,649,989	C→A	5.9%	G309C (GGC→TGC)	PP_4113 ←	hypothetical protein
RA	4,654,726	T→C	5.5%	F402L (TTC→CTC)	aceA →	isocitrate lyase
RA	4,669,731	G→C	8.7%	T21T (ACG→ACC)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,669,732	G→A	8.8%	V22M (GTG→ATG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,669,733	T→C	8.9%	V22A (GTG→GCG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,669,734	G→C	8.8%	V22V (GTG→GTC) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,669,744	C→G	7.0%	L26V (CTG→GTG)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,673,549	G→C	8.0%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,673,550	G→C	8.0%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,673,551	G→C	8.0%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,681,789:1	+C	7.2%	coding (79/1431 nt)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,795	T→A	8.1%	L29M (TTG→ATG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,796	T→A	7.8%	L29* (TTG→TAG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,694,904	C→T	6.9%	L927L (CTG→TTG)	PP_4154 →	class 3 aminotransferase
RA	4,705,413	T→A	21.0%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,414	T→A	21.0%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,318	C→G	5.4%	intergenic (‑20/+90)	PP_4163 ← / ← PP_4164	hypothetical protein/alpha/beta hydrolase
RA	4,711,817	C→G	6.3%	L17V (CTG→GTG) ‡	PP_4171 →	hypothetical protein
RA	4,711,818	T→A	6.3%	L17Q (CTG→CAG) ‡	PP_4171 →	hypothetical protein
RA	4,711,821	T→A	6.2%	L18H (CTC→CAC) ‡	PP_4171 →	hypothetical protein
RA	4,711,822	C→G	6.2%	L18L (CTC→CTG) ‡	PP_4171 →	hypothetical protein
RA	4,717,954	G→T	6.1%	E173D (GAG→GAT)	fabB →	3‑oxoacyl‑ACP synthase
RA	4,717,958	A→C	5.8%	I175L (ATC→CTC)	fabB →	3‑oxoacyl‑ACP synthase
RA	4,735,320	C→T	100%	M105I (ATG→ATA)	sucA ←	2‑oxoglutarate dehydrogenase subunit E1
RA	4,740,308	A→T	6.5%	I279F (ATC→TTC) ‡	gltA →	citrate synthase
RA	4,740,310	C→T	6.5%	I279I (ATC→ATT) ‡	gltA →	citrate synthase
RA	4,740,312	G→T	6.7%	G280V (GGC→GTC)	gltA →	citrate synthase
RA	4,740,319	Δ1 bp	7.5%	coding (846/1290 nt)	gltA →	citrate synthase
RA	4,740,323:1	+G	7.2%	coding (850/1290 nt)	gltA →	citrate synthase
RA	4,740,330	A→C	7.1%	D286A (GAC→GCC)	gltA →	citrate synthase
RA	4,740,332	A→G	7.3%	K287E (AAA→GAA) ‡	gltA →	citrate synthase
RA	4,740,334	A→T	7.3%	K287N (AAA→AAT) ‡	gltA →	citrate synthase
RA	4,740,805	Δ1 bp	100%	intergenic (+42/+711)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,816	T→G	100%	intergenic (+53/+700)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,819	2 bp→CT	100%	intergenic (+56/+696)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,839	C→G	27.1%	intergenic (+76/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,841	T→A	27.9%	intergenic (+78/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	T→A	28.2%	intergenic (+79/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,844	C→G	26.3%	intergenic (+81/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,229	A→C	100%	intergenic (+466/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,231	C→G	100%	intergenic (+468/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,234	C→T	100%	intergenic (+471/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,236	2 bp→TG	100%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,239	A→G	100%	intergenic (+476/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,243	3 bp→TGC	100%	intergenic (+480/+271)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,255	C→T	100%	intergenic (+492/+261)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,257	A→C	100%	intergenic (+494/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,260	2 bp→GC	100%	intergenic (+497/+255)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,263	A→C	100%	intergenic (+500/+253)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,272	A→G	100%	intergenic (+509/+244)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	100%	intergenic (+511/+242)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	G→C	100%	intergenic (+513/+240)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,278	C→T	100%	intergenic (+515/+238)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283:1	+T	100%	intergenic (+520/+233)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,289	C→G	100%	intergenic (+526/+227)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,292	C→T	100%	intergenic (+529/+224)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,294	C→G	100%	intergenic (+531/+222)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,296	A→C	100%	intergenic (+533/+220)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298	C→T	100%	intergenic (+535/+218)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,744,600	A→C	6.3%	S76A (TCC→GCC)	PP_4198 ←	OmpA family protein
RA	4,744,607	G→T	6.0%	G73G (GGC→GGA)	PP_4198 ←	OmpA family protein
RA	4,744,743	C→G	6.3%	S28T (AGT→ACT)	PP_4198 ←	OmpA family protein
RA	4,744,747	T→C	6.3%	S27G (AGC→GGC)	PP_4198 ←	OmpA family protein
RA	4,767,818	C→T	11.6%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,767,819	A→G	11.5%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,768,057	G→C	5.6%	P252R (CCT→CGT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,768,058	G→C	5.6%	P252A (CCT→GCT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,768,066	T→A	5.5%	N249I (AAC→ATC)	PP_4218 ←	lipase/esterase family protein
RA	4,783,688	A→G	8.4%	L1209P (CTG→CCG)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,783,691	C→T	8.4%	R1208Q (CGG→CAG)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,796,604	A→G	21.7%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,612	C→T	33.3%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,614	G→C	33.4%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,617	G→C	30.0%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,619	A→G	28.1%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,627	C→T	25.7%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,812,184	A→T	6.0%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,821,130	C→T	6.5%	E3354K (GAG→AAG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,821,134	G→C	6.7%	L3352L (CTC→CTG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,821,138	A→G	6.7%	L3351S (TTG→TCG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,054	C→A	8.2%	S1379I (AGT→ATT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,055	T→G	8.5%	S1379R (AGT→CGT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,043	C→A	9.2%	intergenic (+18/+134)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,046	C→G	9.4%	intergenic (+21/+131)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,054	A→T	10.9%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,057	T→A	10.6%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,060	A→T	10.8%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,833,370	C→G	6.8%	G229R (GGG→CGG)	PP_4246 ←	substrate‑binding protein
RA	4,833,371	C→G	6.1%	P228P (CCG→CCC)	PP_4246 ←	substrate‑binding protein
RA	4,842,904:1	+G	16.0%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,850,158	C→T	8.5%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,159	C→G	8.5%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,160	A→G	8.6%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,851,692	T→A	5.4%	intergenic (+84/+35)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,710	C→T	5.6%	intergenic (+102/+17)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,711	A→T	5.6%	intergenic (+103/+16)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,712	A→G	5.5%	intergenic (+104/+15)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,854,769	A→T	5.1%	V111E (GTG→GAG)	dnaX ←	DNA polymerase III subunit gamma
RA	4,854,772	T→A	5.2%	N110I (AAC→ATC)	dnaX ←	DNA polymerase III subunit gamma
RA	4,854,775	T→A	5.2%	D109V (GAT→GTT)	dnaX ←	DNA polymerase III subunit gamma
RA	4,860,813	G→C	5.3%	L79L (CTC→CTG)	ligA ←	DNA ligase
RA	4,880,867	A→T	6.2%	intergenic (+136/‑51)	PP_4289 → / → uacT	membrane protein/uric acid permease
RA	4,880,869	G→C	6.3%	intergenic (+138/‑49)	PP_4289 → / → uacT	membrane protein/uric acid permease
RA	4,880,871	A→T	6.2%	intergenic (+140/‑47)	PP_4289 → / → uacT	membrane protein/uric acid permease
RA	4,900,070	T→C	5.8%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,904,996	A→C	5.4%	intergenic (‑163/+72)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,998	G→T	5.2%	intergenic (‑165/+70)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,909,949	C→G	8.0%	intergenic (+342/+137)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,911,779	C→G	8.3%	Q134H (CAG→CAC)	ccmH ←	cytochrome c heme lyase subunit
RA	4,911,782:1	+T	7.8%	coding (399/477 nt)	ccmH ←	cytochrome c heme lyase subunit
RA	4,911,791	Δ1 bp	7.6%	coding (390/477 nt)	ccmH ←	cytochrome c heme lyase subunit
RA	4,911,795	C→G	7.4%	R129P (CGT→CCT)	ccmH ←	cytochrome c heme lyase subunit
RA	4,915,748	C→T	6.6%	G114S (GGC→AGC)	ccmC ←	protoheme IX reservoir complex subunit
RA	4,915,752	A→T	6.9%	V112V (GTT→GTA)	ccmC ←	protoheme IX reservoir complex subunit
RA	4,915,756	A→G	6.9%	L111P (CTG→CCG)	ccmC ←	protoheme IX reservoir complex subunit
RA	4,918,174	C→G	6.4%	L191L (CTC→CTG)	PP_4328 →	hypothetical protein
RA	4,936,918	C→G	5.1%	intergenic (‑329/‑89)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,919	A→T	5.1%	intergenic (‑330/‑88)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,945,329	G→T	11.8%	intergenic (+689/+109)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,332	C→T	11.7%	intergenic (+692/+106)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,333	A→G	11.8%	intergenic (+693/+105)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,358	T→C	25.0%	intergenic (+718/+80)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,368	A→G	24.5%	intergenic (+728/+70)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,370	C→T	24.5%	intergenic (+730/+68)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,949,941	C→G	9.5%	G135R (GGC→CGC)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,949,944	C→G	9.9%	D134H (GAT→CAT)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,950,972	T→G	20.3%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,950,973	C→A	13.9%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,963,035	G→A	5.4%	A207V (GCC→GTC)	fleS ←	two‑component system sensor histidine kinase FleS
RA	4,964,907	G→C	6.6%	R151G (CGT→GGT)	fleQ ←	transcriptional regulator FleQ
RA	4,964,909	C→G	6.8%	S150T (AGT→ACT)	fleQ ←	transcriptional regulator FleQ
RA	4,964,911	G→C	6.6%	T149T (ACC→ACG)	fleQ ←	transcriptional regulator FleQ
RA	4,968,140	A→G	5.9%	intergenic (‑36/+39)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,968,143	T→G	5.6%	intergenic (‑39/+36)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,968,144	T→C	5.9%	intergenic (‑40/+35)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,968,145	G→A	5.9%	intergenic (‑41/+34)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,968,146	C→A	6.0%	intergenic (‑42/+33)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,968,149	C→T	5.8%	intergenic (‑45/+30)	PP_4377 ← / ← fliC	flagellin FlaG/flagellin
RA	4,969,480	T→C	6.1%	I255V (ATC→GTC)	fliC ←	flagellin
JC	4,980,585	+GGC	100%	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,998,171	G→T	9.6%	intergenic (‑71/‑145)	PP_4405 ← / → PP_4406	sensory box protein/hypothetical protein
RA	4,998,172	A→C	9.6%	intergenic (‑72/‑144)	PP_4405 ← / → PP_4406	sensory box protein/hypothetical protein
RA	5,015,794	C→T	5.3%	intergenic (‑57/+177)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,028,905	G→A	5.2%	K391K (AAG→AAA)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,028,931	T→C	5.1%	intergenic (+8/‑431)	PP_4432 → / → PP_4433	Xaa‑Pro aminopeptidase/amino acid MFS transporter
RA	5,032,756	C→G	7.1%	P92R (CCT→CGT) ‡	PP_4435 →	hypothetical protein
RA	5,032,757	T→C	7.2%	P92P (CCT→CCC) ‡	PP_4435 →	hypothetical protein
RA	5,032,760	G→A	7.6%	A93A (GCG→GCA)	PP_4435 →	hypothetical protein
RA	5,032,761	C→G	7.6%	R94G (CGA→GGA)	PP_4435 →	hypothetical protein
RA	5,059,500	Δ1 bp	7.5%	coding (1334/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,505	A→T	8.6%	N443K (AAT→AAA)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,508:1	+G	8.6%	coding (1326/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,068,331	C→G	9.8%	G325A (GGT→GCT) ‡	PP_4465 ←	porin
RA	5,068,332	C→G	9.8%	G325R (GGT→CGT) ‡	PP_4465 ←	porin
RA	5,074,828	C→T	9.2%	A28A (GCC→GCT)	PP_4468 →	Cro/CI family transcriptional regulator
RA	5,074,829	A→G	9.1%	S29G (AGC→GGC)	PP_4468 →	Cro/CI family transcriptional regulator
RA	5,078,877	G→C	6.9%	intergenic (‑122/+275)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,126	T→A	9.8%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,129	T→A	9.7%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,092,669	A→G	6.2%	L318S (TTG→TCG)	PP_4482 ←	AraC family transcriptional regulator
RA	5,098,171	C→G	7.5%	M407I (ATG→ATC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,098,177	Δ1 bp	6.3%	coding (1215/2091 nt)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,098,182	T→G	5.9%	I404L (ATT→CTT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,103,088	A→T	5.1%	intergenic (+20/‑170)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,103,089	G→C	5.1%	intergenic (+21/‑169)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,103,090	A→T	5.1%	intergenic (+22/‑168)	phhB → / → PP_5694	pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein
RA	5,116,500	T→G	7.1%	L29R (CTG→CGG)	PP_4502 →	hypothetical protein
RA	5,118,195	T→G	7.0%	intergenic (+27/‑32)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,196	C→T	7.1%	intergenic (+28/‑31)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,197	A→G	6.9%	intergenic (+29/‑30)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,198	C→A	6.7%	intergenic (+30/‑29)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,123,458	T→A	6.6%	D225V (GAC→GTC)	PP_4510 ←	hypothetical protein
RA	5,129,326	A→C	6.3%	F693C (TTC→TGC)	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,129,328	C→G	6.1%	Q692H (CAG→CAC) ‡	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,129,330	G→T	6.2%	Q692K (CAG→AAG) ‡	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,137,665	A→G	8.9%	intergenic (‑64/‑149)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,137,670	C→T	9.4%	intergenic (‑69/‑144)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,149,180	G→C	8.4%	intergenic (‑166/+282)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,153,310	C→A	8.3%	intergenic (‑1387/+27)	PP_5696 ← / ← PP_4537	hypothetical protein/membrane protein
RA	5,153,311	C→G	8.3%	intergenic (‑1388/+26)	PP_5696 ← / ← PP_4537	hypothetical protein/membrane protein
RA	5,153,312	T→G	8.2%	intergenic (‑1389/+25)	PP_5696 ← / ← PP_4537	hypothetical protein/membrane protein
RA	5,162,202	T→A	7.3%	W324R (TGG→AGG) ‡	PP_4544 →	hypothetical protein
RA	5,162,204	G→C	7.4%	W324C (TGG→TGC) ‡	PP_4544 →	hypothetical protein
RA	5,162,206	T→A	7.0%	L325Q (CTG→CAG)	PP_4544 →	hypothetical protein
RA	5,162,208	G→C	7.4%	A326P (GCT→CCT) ‡	PP_4544 →	hypothetical protein
RA	5,162,210	T→A	7.4%	A326A (GCT→GCA) ‡	PP_4544 →	hypothetical protein
RA	5,173,248	G→C	15.5%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,174,514	G→T	6.0%	L156M (CTG→ATG)	fadD‑II ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,181,141:1	+T	5.8%	coding (802/957 nt)	PP_4560 ←	ribonuclease BN
RA	5,181,146	A→T	6.1%	L266H (CTC→CAC)	PP_4560 ←	ribonuclease BN
RA	5,181,149	A→T	6.0%	L265Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,152	A→T	6.1%	L264Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,155	A→T	6.1%	V263E (GTG→GAG)	PP_4560 ←	ribonuclease BN
RA	5,181,160	Δ1 bp	6.1%	coding (783/957 nt)	PP_4560 ←	ribonuclease BN
RA	5,182,059	G→T	13.3%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,065	T→G	13.2%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,066	C→A	12.8%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,072	A→C	10.8%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,110	A→C	5.4%	M83L (ATG→CTG)	PP_4564 →	lipoprotein
RA	5,184,117	C→T	5.9%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,120	A→G	5.9%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,184,127	G→T	6.0%	Q88H (CAG→CAT)	PP_4564 →	lipoprotein
RA	5,187,968	A→G	7.5%	E158G (GAG→GGG)	PP_4567 →	hypothetical protein
RA	5,187,972	A→T	7.4%	E159D (GAA→GAT)	PP_4567 →	hypothetical protein
RA	5,187,979	T→G	8.4%	L162V (TTG→GTG) ‡	PP_4567 →	hypothetical protein
RA	5,187,980	T→C	8.3%	L162S (TTG→TCG) ‡	PP_4567 →	hypothetical protein
RA	5,187,983	G→A	8.9%	R163H (CGC→CAC) ‡	PP_4567 →	hypothetical protein
RA	5,187,984	C→A	9.7%	R163R (CGC→CGA) ‡	PP_4567 →	hypothetical protein
RA	5,187,991	A→T	8.8%	I166F (ATC→TTC)	PP_4567 →	hypothetical protein
RA	5,187,995	C→T	7.4%	P167L (CCC→CTC)	PP_4567 →	hypothetical protein
RA	5,194,887	T→G	10.7%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,208,055	G→T	5.5%	A218A (GCC→GCA)	PP_4589 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	5,212,487	A→G	6.8%	intergenic (+51/+43)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,488	C→A	6.8%	intergenic (+52/+42)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,491	T→G	7.8%	intergenic (+55/+39)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,492	C→T	6.8%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,226,651	T→A	5.1%	intergenic (+13/+17)	PP_4605 → / ← PP_4606	AraC family transcriptional regulator/ferric siderophore receptor
RA	5,226,652	C→G	6.0%	intergenic (+14/+16)	PP_4605 → / ← PP_4606	AraC family transcriptional regulator/ferric siderophore receptor
RA	5,226,653	T→A	5.1%	intergenic (+15/+15)	PP_4605 → / ← PP_4606	AraC family transcriptional regulator/ferric siderophore receptor
RA	5,229,179	G→A	7.2%	intergenic (‑121/+55)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,191	Δ1 bp	8.0%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,195	C→G	8.0%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,198	C→G	7.7%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,201:1	+C	8.0%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,232,054	C→G	5.5%	A214A (GCG→GCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,237,936	T→A	6.0%	K156* (AAG→TAG)	PP_4615 ←	membrane protein
RA	5,254,520	T→A	7.1%	I38I (ATA→ATT) ‡	PP_4630 ←	MerR family transcriptional regulator
RA	5,254,521	A→T	7.2%	I38K (ATA→AAA) ‡	PP_4630 ←	MerR family transcriptional regulator
RA	5,254,522	T→A	7.2%	I38L (ATA→TTA) ‡	PP_4630 ←	MerR family transcriptional regulator
RA	5,257,871	T→C	6.0%	intergenic (‑70/+74)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,257,872	G→A	5.9%	intergenic (‑71/+73)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,257,874	A→G	6.1%	intergenic (‑73/+71)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,261,067	A→G	5.9%	D178D (GAT→GAC) ‡	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,261,068	T→C	5.9%	D178G (GAT→GGT) ‡	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,263,966	A→G	5.3%	V94A (GTG→GCG)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,263,969	A→T	5.2%	L93Q (CTG→CAG)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,263,972	C→T	5.4%	R92H (CGC→CAC)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,271,001	T→G	5.2%	intergenic (+67/+57)	mscL → / ← fpr‑II	large‑conductance mechanosensitive channel/ferredoxin‑‑NADP(+) reductase
RA	5,276,837	A→G	9.3%	intergenic (‑141/‑203)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,276,838	A→T	9.3%	intergenic (‑142/‑202)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,276,840	G→A	9.3%	intergenic (‑144/‑200)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,276,843	T→C	9.2%	intergenic (‑147/‑197)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,276,845	A→T	9.1%	intergenic (‑149/‑195)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,276,846	C→T	9.4%	intergenic (‑150/‑194)	cioA ← / → PP_4652	cyanide insensitive ubiquinol oxidase subunit I/membrane protein
RA	5,295,541	A→G	7.1%	intergenic (+72/+54)	PP_4668 → / ← PP_4669	LysR family transcriptional regulator/OmpA family protein
RA	5,300,132	A→T	9.1%	V1214E (GTA→GAA)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,136	G→T	9.4%	P1213T (CCG→ACG)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,137	C→G	9.4%	A1212A (GCG→GCC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,141	T→A	9.4%	H1211L (CAC→CTC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,144	T→A	9.2%	E1210V (GAG→GTG)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,148	C→G	9.1%	G1209R (GGC→CGC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,149	A→C	9.0%	R1208R (CGT→CGG)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,300,153	A→T	8.8%	F1207Y (TTC→TAC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,301,890	T→C	5.7%	D628G (GAC→GGC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,301,892	A→T	5.7%	P627P (CCT→CCA) ‡	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,301,894	G→A	5.6%	P627S (CCT→TCT) ‡	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,305,657	A→G	5.2%	L532S (TTG→TCG)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,662	C→T	5.5%	L530L (CTG→CTA) ‡	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,663	A→G	5.4%	L530P (CTG→CCG) ‡	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,668	C→T	5.2%	A528A (GCG→GCA)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,319,747	A→G	6.0%	intergenic (‑374/+35)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,319,750	A→G	5.8%	intergenic (‑377/+32)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,319,751	T→A	5.8%	intergenic (‑378/+31)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,319,752	C→T	5.9%	intergenic (‑379/+30)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,319,755	C→T	5.9%	intergenic (‑382/+27)	ilvI ← / ← PP_4681	acetohydroxybutanoate synthase/acetolactate synthase/hypothetical protein
RA	5,323,169	A→G	6.0%	L28P (CTC→CCC)	mrcB ←	transglycosylase/transpeptidase
RA	5,329,396	T→A	6.1%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,329,642	T→G	5.2%	L92R (CTG→CGG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,333,664	C→A	8.0%	L32M (CTG→ATG) ‡	PP_4695 →	two‑component system sensor histidine kinase
RA	5,333,666	G→C	8.0%	L32L (CTG→CTC) ‡	PP_4695 →	two‑component system sensor histidine kinase
RA	5,333,668	T→G	7.9%	I33S (ATC→AGC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,333,675	T→C	8.9%	R35R (CGT→CGC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,339,896	G→T	7.8%	R375L (CGC→CTC) ‡	pcnB →	poly(A) polymerase
RA	5,339,897	C→G	6.0%	R375R (CGC→CGG) ‡	pcnB →	poly(A) polymerase
RA	5,339,900	C→G	6.7%	R376R (CGC→CGG)	pcnB →	poly(A) polymerase
RA	5,339,901	A→C	5.8%	S377R (AGC→CGC)	pcnB →	poly(A) polymerase
RA	5,339,908	A→G	5.0%	K379R (AAG→AGG)	pcnB →	poly(A) polymerase
RA	5,344,461:1	+C	15.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,461:2	+T	15.2%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,467	C→G	16.7%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,471	C→T	21.2%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,480	A→G	22.6%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,484	C→G	24.6%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,489	Δ1 bp	21.4%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,490	Δ1 bp	20.7%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,350,084	C→T	5.6%	A853V (GCC→GTC) ‡	PP_4704 →	hypothetical protein
RA	5,350,085	C→G	5.6%	A853A (GCC→GCG) ‡	PP_4704 →	hypothetical protein
RA	5,350,086	A→G	5.5%	T854A (ACC→GCC)	PP_4704 →	hypothetical protein
RA	5,354,658	T→C	5.8%	G11G (GGA→GGG)  noncoding (17/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,360,368	G→C	5.3%	D157E (GAC→GAG)	rimP ←	ribosome maturation factor
RA	5,361,071	A→T	10.8%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,072	A→T	10.8%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,372,002	G→C	5.3%	intergenic (‑66/+31)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,372,003	G→C	5.3%	intergenic (‑67/+30)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,381,267	T→C	5.4%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,268	T→A	5.3%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,269	G→A	5.5%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,419,003	C→G	6.1%	S23T (AGT→ACT)	PP_4758 ←	MFS transporter
RA	5,422,392	A→T	8.4%	Y110N (TAC→AAC)	tesB ←	acyl‑CoA thioesterase II
RA	5,450,204	T→C	7.4%	L28L (TTG→CTG)	ybeY →	endoribonuclease YbeY
RA	5,450,210	C→T	11.6%	Q30* (CAG→TAG) ‡	ybeY →	endoribonuclease YbeY
RA	5,450,211	A→G	10.3%	Q30R (CAG→CGG) ‡	ybeY →	endoribonuclease YbeY
RA	5,450,217	G→A	10.3%	S32N (AGC→AAC)	ybeY →	endoribonuclease YbeY
RA	5,458,892:1	+A	8.5%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,898	Δ1 bp	7.1%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,479,939:1	+G	6.4%	coding (463/993 nt)	prmA →	ribosomal protein L11 methyltransferase
RA	5,485,150	A→G	28.6%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,153	A→G	25.5%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,154	T→C	30.8%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,159	G→A	30.7%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,162	T→C	31.7%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,167	G→A	26.7%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,168	C→T	26.6%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,171	C→T	26.6%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,486,712	T→A	5.1%	L14* (TTG→TAG)	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,489,780	A→C	8.6%	M88L (ATG→CTG) ‡	PP_4825 →	MarC family membrane protein
RA	5,489,781	T→A	8.5%	M88K (ATG→AAG) ‡	PP_4825 →	MarC family membrane protein
RA	5,489,782	G→T	9.0%	M88I (ATG→ATT) ‡	PP_4825 →	MarC family membrane protein
RA	5,503,135	C→A	5.5%	L29M (CTG→ATG) ‡	oprC →	copper receptor OprC
RA	5,503,136	T→G	6.0%	L29R (CTG→CGG) ‡	oprC →	copper receptor OprC
RA	5,503,142	C→G	5.7%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,148	C→A	5.5%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,149	T→G	5.4%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,518,539	A→T	5.9%	A14A (GCT→GCA)	PP_4850 ←	membrane protein
RA	5,518,544	G→C	5.9%	P13A (CCC→GCC)	PP_4850 ←	membrane protein
RA	5,518,546	A→T	6.0%	I12N (ATT→AAT)	PP_4850 ←	membrane protein
RA	5,518,548	G→C	5.8%	G11G (GGC→GGG)	PP_4850 ←	membrane protein
RA	5,518,553	A→T	5.7%	C10S (TGC→AGC)	PP_4850 ←	membrane protein
RA	5,518,736	T→A	6.5%	K59* (AAA→TAA)	PP_4851 ←	phosphate starvation‑inducible protein PsiF
RA	5,529,360	C→G	6.0%	intergenic (‑574/+20)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,531,696	G→T	6.0%	L193M (CTG→ATG)	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,535,425	G→C	5.5%	E148Q (GAG→CAG)	pncB →	nicotinate phosphoribosyltransferase
RA	5,535,979	C→A	7.5%	A332A (GCC→GCA)	pncB →	nicotinate phosphoribosyltransferase
RA	5,535,980	C→G	7.9%	L333V (CTG→GTG) ‡	pncB →	nicotinate phosphoribosyltransferase
RA	5,535,981	T→G	8.2%	L333R (CTG→CGG) ‡	pncB →	nicotinate phosphoribosyltransferase
RA	5,537,058	A→G	20.8%	intergenic (+35/+68)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,061	A→T	21.9%	intergenic (+38/+65)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,062	G→C	25.8%	intergenic (+39/+64)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,067	A→G	31.2%	intergenic (+44/+59)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,068	A→G	25.0%	intergenic (+45/+58)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,069	C→T	24.9%	intergenic (+46/+57)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,070	C→T	25.0%	intergenic (+47/+56)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,075	G→C	24.5%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,076	A→T	24.3%	intergenic (+53/+50)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,079	C→T	25.8%	intergenic (+56/+47)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,539,279	C→G	9.4%	K569N (AAG→AAC)	PP_4872 ←	hypothetical protein
RA	5,548,699	T→G	5.0%	M119L (ATG→CTG)	rnr ←	exoribonuclease R
RA	5,548,700	C→A	5.6%	Q118H (CAG→CAT)	rnr ←	exoribonuclease R
RA	5,549,605	T→A	7.2%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,606	T→A	7.5%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,552,913	T→G	10.2%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,915	C→A	14.8%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
JC	5,555,608	+GCC	94.6%	intergenic (‑84/+87)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,559,744	A→G	7.3%	A251A (GCT→GCC)	hisZ ←	ATP phosphoribosyltransferase regulatory subunit
RA	5,570,177	T→G	8.4%	A24A (GCA→GCC) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,178	G→C	8.4%	A24G (GCA→GGA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,179	C→A	8.4%	A24S (GCA→TCA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,586,523	T→C	6.9%	T255A (ACC→GCC)	PP_4914 ←	phytase‑like protein
RA	5,586,526	A→G	7.1%	F254L (TTT→CTT)	PP_4914 ←	phytase‑like protein
RA	5,586,528	A→T	6.8%	L253Q (CTG→CAG)	PP_4914 ←	phytase‑like protein
RA	5,586,530	C→T	6.9%	K252K (AAG→AAA)	PP_4914 ←	phytase‑like protein
RA	5,586,533	G→A	7.1%	G251G (GGC→GGT)	PP_4914 ←	phytase‑like protein
RA	5,587,764	T→C	5.5%	S462G (AGC→GGC)	parE ←	DNA topoisomerase IV subunit B
RA	5,587,765	G→A	5.5%	A461A (GCC→GCT)	parE ←	DNA topoisomerase IV subunit B
RA	5,590,072	A→C	6.6%	F218V (TTC→GTC)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,076	A→C	6.5%	I216M (ATT→ATG)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,079	G→T	6.3%	C215* (TGC→TGA)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,083	G→T	7.1%	T214N (ACC→AAC)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,601,811:1	+C	6.2%	coding (1671/5418 nt)	PP_4924 ←	subtilase family serine protease
RA	5,607,907	T→C	7.9%	K78E (AAG→GAG)	cyaB ←	cyclolysin secretion/processing ATP‑binding protein CyaB
RA	5,607,908	G→A	7.8%	L77L (CTC→CTT)	cyaB ←	cyclolysin secretion/processing ATP‑binding protein CyaB
RA	5,655,626:1	+A	16.0%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,631	T→G	23.1%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,636	C→A	20.7%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,641	Δ1 bp	21.4%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,894	T→G	5.1%	intergenic (‑200/‑52)	tktA ← / → sahR	transketolase A/methionine metabolism transcriptional regulator
RA	5,674,750:1	+G	100%	intergenic (+112/+28)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,674,753	G→C	100%	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,675,533	G→A	7.2%	D136D (GAC→GAT) ‡	yceJ ←	iron‑regulated cytochrome b561
RA	5,675,534	T→C	7.4%	D136G (GAC→GGC) ‡	yceJ ←	iron‑regulated cytochrome b561
RA	5,677,945	A→C	9.3%	A20A (GCT→GCG)	PP_4983 ←	amine oxidase
RA	5,680,919	A→G	5.0%	S122P (TCC→CCC)	PP_4986 ←	hemolysin III family channel protein
JC	5,681,415	+CGGG	90.6%	intergenic (‑133/+71)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,685,900	G→C	6.2%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,902	G→C	6.2%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,909	G→C	5.6%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,911	G→C	5.8%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,696,568	C→T	7.0%	intergenic (+20/‑192)	pyrC' → / → hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
RA	5,722,412	G→C	5.1%	A269A (GCC→GCG)	PP_5023 ←	amino acid ABC transporter permease
RA	5,722,415	G→C	5.1%	I268M (ATC→ATG)	PP_5023 ←	amino acid ABC transporter permease
RA	5,740,467	T→G	28.9%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,470	A→T	24.3%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,471	A→T	24.4%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,474	C→A	23.1%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,743,351	A→C	6.9%	intergenic (‑184/+63)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,360	C→T	9.1%	intergenic (‑193/+54)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,362	T→C	8.0%	intergenic (‑195/+52)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,363	G→A	8.9%	intergenic (‑196/+51)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,365	A→G	8.7%	intergenic (‑198/+49)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,373	A→C	6.7%	intergenic (‑206/+41)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,882	A→G	5.4%	G661G (GGT→GGC)	glgP ←	glycogen phosphorylase
RA	5,746,485	G→C	5.5%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,746,488	G→C	5.6%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,751,730	G→T	5.5%	intergenic (‑168/‑303)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,736	A→C	6.6%	intergenic (‑174/‑297)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,485	T→G	7.4%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,486	C→A	7.4%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,761,301	T→A	6.4%	L118Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,304	T→A	6.4%	L119Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,762,308	G→T	5.3%	G454C (GGC→TGC) ‡	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,762,310	C→G	5.3%	G454G (GGC→GGG) ‡	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,763,633	G→C	5.3%	A337P (GCC→CCC)	PP_5057 →	M23/M37 family peptidase
RA	5,763,637	A→C	5.5%	K338T (AAG→ACG) ‡	PP_5057 →	M23/M37 family peptidase
RA	5,763,638	G→T	5.5%	K338N (AAG→AAT) ‡	PP_5057 →	M23/M37 family peptidase
RA	5,763,642	G→C	6.6%	D340H (GAC→CAC)	PP_5057 →	M23/M37 family peptidase
RA	5,763,961:1	+A	6.9%	intergenic (+20/‑59)	PP_5057 → / → ctpA	M23/M37 family peptidase/carboxy‑terminal‑processing protease
RA	5,763,964	G→C	6.8%	intergenic (+23/‑56)	PP_5057 → / → ctpA	M23/M37 family peptidase/carboxy‑terminal‑processing protease
RA	5,763,967	Δ1 bp	7.1%	intergenic (+26/‑53)	PP_5057 → / → ctpA	M23/M37 family peptidase/carboxy‑terminal‑processing protease
RA	5,772,152	G→T	5.4%	L271M (CTG→ATG)	betT‑I ←	choline transporter
RA	5,772,157	A→C	5.6%	I269S (ATC→AGC)	betT‑I ←	choline transporter
RA	5,779,374	G→C	5.5%	R67R (CGC→CGG)	PP_5065 ←	hypothetical protein
RA	5,785,963	T→G	5.4%	F323V (TTC→GTC) ‡	PP_5068 →	hypothetical protein
RA	5,785,965	C→A	5.6%	F323L (TTC→TTA) ‡	PP_5068 →	hypothetical protein
RA	5,785,967	T→A	5.6%	L324Q (CTG→CAG)	PP_5068 →	hypothetical protein
RA	5,785,970	C→G	5.6%	P325R (CCG→CGG)	PP_5068 →	hypothetical protein
RA	5,785,973	T→A	5.5%	L326Q (CTG→CAG)	PP_5068 →	hypothetical protein
RA	5,785,975	T→G	5.6%	Y327D (TAC→GAC) ‡	PP_5068 →	hypothetical protein
RA	5,785,977	C→A	5.6%	Y327* (TAC→TAA) ‡	PP_5068 →	hypothetical protein
RA	5,786,763	T→G	6.3%	L59R (CTG→CGG)	trxC →	thioredoxin
RA	5,786,987	T→C	5.8%	S134P (TCG→CCG) ‡	trxC →	thioredoxin
RA	5,786,988	C→A	5.4%	S134* (TCG→TAG) ‡	trxC →	thioredoxin
RA	5,786,991	T→G	5.9%	L135R (CTG→CGG) ‡	trxC →	thioredoxin
RA	5,786,992	G→A	6.1%	L135L (CTG→CTA) ‡	trxC →	thioredoxin
RA	5,788,719	T→A	5.0%	H17L (CAC→CTC)	ynfL ←	DNA‑binding transcriptional regulator
RA	5,793,887	A→T	5.2%	L1338Q (CTG→CAG)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,798,198	T→C	6.7%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,201	G→A	5.9%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,206	A→G	5.1%	intergenic (‑307/+67)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,375	T→G	7.2%	A496A (GCA→GCC) ‡	PP_5077 ←	hypothetical protein
RA	5,798,376	G→A	7.5%	A496V (GCA→GTA) ‡	PP_5077 ←	hypothetical protein
RA	5,798,379	T→C	7.7%	D495G (GAC→GGC) ‡	PP_5077 ←	hypothetical protein
RA	5,798,380	C→A	7.9%	D495Y (GAC→TAC) ‡	PP_5077 ←	hypothetical protein
RA	5,807,984	A→G	21.2%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,985	T→C	21.7%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,986	G→A	21.2%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,987	C→T	21.1%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,821,897	T→A	7.0%	L173Q (CTG→CAG)	metW →	methionine biosynthesis protein MetW
RA	5,827,657	G→A	5.3%	A190A (GCG→GCA)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,827,659	T→C	5.5%	V191A (GTG→GCG)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,846,183	T→C	6.5%	T217A (ACC→GCC)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,846,190	G→A	6.1%	G214G (GGC→GGT)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,849,046	C→T	8.7%	intergenic (+21/‑250)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,047	C→G	8.3%	intergenic (+22/‑249)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,048	A→G	9.6%	intergenic (+23/‑248)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,866,696	G→T	8.5%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,697	A→C	9.7%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,869,113	T→G	5.2%	T84P (ACC→CCC)	PP_5143 ←	membrane protein
RA	5,871,628	A→G	6.0%	L342P (CTC→CCC)	ptsP ←	phosphoenolpyruvate‑dependent regulator
RA	5,874,819	G→T	7.8%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,820	A→C	7.5%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,882,090	C→T	6.2%	T217T (ACC→ACT)	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,091	C→G	6.2%	Q218E (CAG→GAG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,092	A→G	6.2%	Q218R (CAG→CGG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,346	A→G	5.0%	N303D (AAC→GAC) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,348	C→T	5.0%	N303N (AAC→AAT) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,349	A→G	5.0%	I304V (ATC→GTC) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,351	C→T	5.0%	I304I (ATC→ATT) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,886,764	C→G	5.8%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,769	C→G	6.4%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,897,742	T→C	15.3%	intergenic (‑142/+92)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,770	A→G	30.6%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,773	G→A	32.3%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,778	C→G	31.4%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,779	G→C	31.3%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,782	G→C	30.6%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,783	C→G	29.0%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,788	T→C	29.0%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,791	C→T	23.7%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,902,946	G→A	5.4%	P31S (CCT→TCT)	PP_5175 ←	HlyD family secretion protein
RA	5,902,949	G→C	5.4%	L30V (CTG→GTG)	PP_5175 ←	HlyD family secretion protein
RA	5,902,952	T→C	5.4%	T29A (ACA→GCA)	PP_5175 ←	HlyD family secretion protein
RA	5,903,164	G→T	12.8%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,165	A→C	19.9%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,938,660	C→A	6.8%	R407R (CGC→CGA)	rbbA →	ribosome‑associated ATPase
RA	5,938,662	T→A	6.5%	L408Q (CTG→CAG)	rbbA →	ribosome‑associated ATPase
RA	5,938,664	T→G	6.6%	S409A (TCG→GCG)	rbbA →	ribosome‑associated ATPase
RA	5,942,313	G→C	7.0%	R68G (CGG→GGG)	PP_5209 ←	hypothetical protein
RA	5,942,315	G→C	6.3%	P67R (CCG→CGG)	PP_5209 ←	hypothetical protein
RA	5,948,277	C→T	100%	R66H (CGT→CAT)	rho ←	transcription termination factor Rho
RA	5,948,682	T→A	7.1%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,683	T→A	7.1%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,951,589	T→C	9.5%	Q456Q (CAA→CAG)	ppk ←	polyphosphate kinase
RA	5,951,594	G→A	7.9%	L455L (CTG→TTG)	ppk ←	polyphosphate kinase
RA	5,954,932	A→G	5.0%	V24A (GTG→GCG)	PP_5219 ←	membrane protein
RA	5,959,995	A→T	7.8%	noncoding (74/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,959,996	A→T	8.9%	noncoding (73/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,961,628	T→A	5.1%	I175N (ATT→AAT)	lysA‑II →	diaminopimelate decarboxylase
RA	5,963,846	T→G	10.7%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,851	C→A	11.6%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,965,571	A→C	9.0%	intergenic (+69/+31)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,965,573	C→T	8.8%	intergenic (+71/+29)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,965,574	G→C	8.9%	intergenic (+72/+28)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,965,575	A→G	8.9%	intergenic (+73/+27)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,965,577	G→T	8.6%	intergenic (+75/+25)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,967,628	A→C	5.1%	L22R (CTG→CGG)	amtB ←	ammonium transporter AmtB
RA	5,967,634	A→T	5.1%	L20H (CTT→CAT)	amtB ←	ammonium transporter AmtB
RA	5,967,639	G→T	5.4%	P18P (CCC→CCA)	amtB ←	ammonium transporter AmtB
RA	5,971,289	C→G	5.3%	G2A (GGA→GCA) ‡	PP_5236 ←	hypothetical protein
RA	5,971,290	C→G	5.3%	G2R (GGA→CGA) ‡	PP_5236 ←	hypothetical protein
RA	5,971,291	C→G	5.3%	M1M (ATG→ATC) †	PP_5236 ←	hypothetical protein
RA	5,981,954	T→G	5.1%	S867A (TCA→GCA)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,994,761	G→C	12.3%	V496V (GTG→GTC)	PP_5251 →	transporter
RA	5,994,765:1	+G	12.7%	coding (1492/1599 nt)	PP_5251 →	transporter
RA	6,003,644	C→A	5.5%	G98V (GGC→GTC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,003,645	C→A	5.6%	G98C (GGC→TGC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,003,646	T→G	5.6%	E97D (GAA→GAC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,003,647	T→G	5.5%	E97A (GAA→GCA) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,012,087	C→T	5.1%	R313R (CGC→CGT)	rep →	single‑stranded DNA dependent ATPase
RA	6,013,836	G→A	14.7%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,838	A→G	14.7%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,845	G→C	14.3%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,846	T→G	14.3%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,847	C→T	14.3%	intergenic (+52/+58)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,852	A→G	13.1%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,853	C→A	13.5%	intergenic (+58/+52)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,854	G→C	13.5%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,861	C→T	15.6%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,863	T→C	14.7%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,885	T→C	100%	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,026,074	C→T	8.1%	Q316* (CAA→TAA) ‡	PP_5276 →	phospholipase D family protein
RA	6,026,075	A→T	7.0%	Q316L (CAA→CTA) ‡	PP_5276 →	phospholipase D family protein
RA	6,026,076	A→G	7.0%	Q316Q (CAA→CAG) ‡	PP_5276 →	phospholipase D family protein
RA	6,035,933	A→G	6.4%	I155V (ATC→GTC) ‡	algC →	phosphomannomutase/phosphoglucomutase
RA	6,035,934	T→A	6.0%	I155N (ATC→AAC) ‡	algC →	phosphomannomutase/phosphoglucomutase
RA	6,035,935	C→T	5.8%	I155I (ATC→ATT) ‡	algC →	phosphomannomutase/phosphoglucomutase
RA	6,042,337	G→C	5.1%	E92Q (GAA→CAA)	PP_5295 →	hypothetical protein
RA	6,045,721	A→C	6.0%	R130R (CGT→CGG) ‡	PP_5298 ←	glutamine amidotransferase
RA	6,045,722	C→A	6.0%	R130L (CGT→CTT) ‡	PP_5298 ←	glutamine amidotransferase
RA	6,045,725	T→G	6.0%	Q129P (CAG→CCG) ‡	PP_5298 ←	glutamine amidotransferase
RA	6,045,726	G→T	5.3%	Q129K (CAG→AAG) ‡	PP_5298 ←	glutamine amidotransferase
RA	6,048,295	C→G	5.4%	P257R (CCT→CGT)	PP_5300 →	LysR family transcriptional regulator
RA	6,048,298	C→G	5.4%	T258R (ACG→AGG)	PP_5300 →	LysR family transcriptional regulator
RA	6,049,442	A→T	5.5%	K102* (AAG→TAG)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,067,735	G→T	5.3%	S126S (TCG→TCT)	PP_5322 →	metal ion transporter
RA	6,073,122:1	+C	9.2%	coding (1134/1671 nt)	PP_5327 ←	phosphate ABC transporter permease
RA	6,077,376	T→C	6.2%	E108G (GAG→GGG)	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,078,930	C→T	6.1%	S99N (AGC→AAC)	PP_5330 ←	MFS transporter
RA	6,078,934	G→C	5.7%	L98V (CTG→GTG)	PP_5330 ←	MFS transporter
RA	6,078,935	G→C	5.7%	T97T (ACC→ACG) ‡	PP_5330 ←	MFS transporter
RA	6,078,936	G→C	5.7%	T97S (ACC→AGC) ‡	PP_5330 ←	MFS transporter
RA	6,078,940	A→G	5.5%	F96L (TTC→CTC)	PP_5330 ←	MFS transporter
RA	6,079,626	G→C	6.9%	D14H (GAC→CAC) ‡	PP_5331 →	acyl‑CoA thioesterase
RA	6,079,628	C→G	6.0%	D14E (GAC→GAG) ‡	PP_5331 →	acyl‑CoA thioesterase
RA	6,079,629	C→G	6.0%	L15V (CTG→GTG) ‡	PP_5331 →	acyl‑CoA thioesterase
RA	6,079,631	G→C	5.8%	L15L (CTG→CTC) ‡	PP_5331 →	acyl‑CoA thioesterase
RA	6,080,988	T→A	11.6%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,080,989	T→A	11.6%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,104,053	T→A	5.1%	intergenic (+31/‑83)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,104,054	T→A	5.1%	intergenic (+32/‑82)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,106,043	T→G	6.4%	D139A (GAC→GCC)	PP_5355 ←	sodium/proton antiporter
RA	6,108,335	G→C	5.6%	W23C (TGG→TGC)	PP_5358 →	hypothetical protein
RA	6,111,977	T→A	8.7%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,125,857	G→T	5.1%	G218W (GGG→TGG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,138,443	T→A	6.1%	F300I (TTC→ATC) ‡	czcC →	CzcC family metal RND transporter outer membrane protein
RA	6,138,444	T→A	6.6%	F300Y (TTC→TAC) ‡	czcC →	CzcC family metal RND transporter outer membrane protein
RA	6,158,981	C→T	5.1%	intergenic (+318/+550)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,983	C→G	5.8%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,987	A→G	5.0%	intergenic (+324/+544)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,166,470	G→T	5.4%	intergenic (‑229/‑451)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,166,471	T→G	6.6%	intergenic (‑230/‑450)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,166,474	C→A	5.2%	intergenic (‑233/‑447)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,166,475	A→C	5.8%	intergenic (‑234/‑446)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,167,902	C→G	6.1%	P328A (CCA→GCA) ‡	PP_5407 →	TnsD‑like transposition protein
RA	6,167,904	A→T	5.9%	P328P (CCA→CCT) ‡	PP_5407 →	TnsD‑like transposition protein
RA	6,167,906	C→G	5.8%	A329G (GCG→GGG)	PP_5407 →	TnsD‑like transposition protein

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	171361–172965	176296–172967	3–4936	25 [23]	[23] 24	PP_16SA–[PP_5SA]	PP_16SA,PP_23SA,[PP_5SA]
*	*	÷	NC_002947	176652–178395	181722–178397	3–5071	24 [21]	[22] 25	PP_16SB–[PP_r01]	PP_16SB,PP_23SB,[PP_r01]
*	*	÷	NC_002947	1367553	1367817	265	25 [22]	[23] 24	[PP_1193]	[PP_1193]

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 13986	88 (1.230)	5 (0.070)	5/250	NT	5.4%	coding (657/2421 nt)	gyrB	DNA gyrase subunit B
	?	NC_002947	= 14012	92 (1.380)					coding (683/2421 nt)	gyrB	DNA gyrase subunit B
*	?	NC_002947	= 44783	66 (0.920)	5 (0.070)	5/258	NT	7.4%	coding (742/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
	?	NC_002947	= 44808	61 (0.880)					coding (717/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
*	?	NC_002947	83467 =	80 (1.120)	7 (0.100)	4/250	NT	9.1%	coding (207/912 nt)	hemF	coproporphyrinogen‑III oxidase
	?	NC_002947	83515 =	65 (0.970)					coding (255/912 nt)	hemF	coproporphyrinogen‑III oxidase
*	?	NC_002947	85506 =	63 (0.880)	4 (0.060)	4/256	NT	6.3%	coding (1212/1566 nt)	PP_0075	choline sulfate transporter
	?	NC_002947	85558 =	59 (0.860)					coding (1160/1566 nt)	PP_0075	choline sulfate transporter
*	?	NC_002947	= 86765	75 (1.050)	4 (0.060)	4/242	NT	6.0%	intergenic (‑48/+97)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	= 2301567	58 (0.900)					intergenic (‑211/‑120)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	= 156459	71 (0.990)	6 (0.090)	5/254	NT	7.6%	coding (1267/1308 nt)	citN	citrate transporter
	?	NC_002947	= 156485	79 (1.160)					coding (1241/1308 nt)	citN	citrate transporter
*	?	NC_002947	164811 =	78 (1.090)	4 (0.060)	4/258	NT	5.3%	coding (646/1437 nt)	pntB	pyridine nucleotide transhydrogenase subunit beta
	?	NC_002947	164846 =	67 (0.970)					coding (611/1437 nt)	pntB	pyridine nucleotide transhydrogenase subunit beta
*	?	NC_002947	= 174906	NA (NA)	8 (0.120)	5/258	NT	NA	noncoding (1704/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174936	NA (NA)					noncoding (1734/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	182535 =	76 (1.060)	4 (0.060)	3/258	NT	5.6%	coding (2028/2487 nt)	PP_0160	ferrioxamine receptor
	?	NC_002947	182589 =	62 (0.900)					coding (1974/2487 nt)	PP_0160	ferrioxamine receptor
*	?	NC_002947	= 192532	83 (1.160)	4 (0.060)	4/250	NT	5.2%	coding (986/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192610	68 (1.020)					coding (908/2157 nt)	paxB	toxin secretion ATP‑binding protein
*	?	NC_002947	196893 =	NA (NA)	4 (0.060)	4/258	NT	13.3%	coding (2399/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	196920 =	27 (0.380)					coding (2426/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 200428	63 (0.880)	6 (0.090)	4/260	NT	8.8%	coding (5934/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 202424	64 (0.920)					coding (7930/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	203692 =	NA (NA)	22 (0.320)	8/260	NT	NA	coding (9198/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	203763 =	NA (NA)					coding (9269/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	204734 =	17 (0.240)	6 (0.090)	4/256	NT	10.2%	coding (10240/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	205438 =	89 (1.300)					coding (10944/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 209901	NA (NA)	5 (0.070)	5/254	NT	72.5%	coding (15407/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 209956	2 (0.030)					coding (15462/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	247753 =	59 (0.820)	4 (0.060)	4/250	NT	6.3%	coding (21/588 nt)	PP_0197	hypothetical protein
	?	NC_002947	247816 =	63 (0.940)					coding (84/588 nt)	PP_0197	hypothetical protein
*	?	NC_002947	302361 =	102 (1.420)	5 (0.070)	4/260	NT	5.2%	coding (526/1314 nt)	envZ	osmolarity sensor protein EnvZ
	?	NC_002947	302434 =	83 (1.190)					coding (599/1314 nt)	envZ	osmolarity sensor protein EnvZ
*	?	NC_002947	328961 =	96 (1.340)	5 (0.070)	4/252	NT	5.6%	coding (289/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	329005 =	77 (1.140)					coding (245/1368 nt)	PP_0270	sensor histidine kinase
*	?	NC_002947	= 449955	75 (1.050)	4 (0.060)	4/252	NT	5.2%	coding (1126/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein
	?	NC_002947	= 450000	74 (1.100)					coding (1171/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein
*	?	NC_002947	462711 =	63 (0.880)	4 (0.060)	4/258	NT	6.0%	coding (689/795 nt)	davA	5‑aminopentanamidase
	?	NC_002947	462757 =	64 (0.930)					coding (643/795 nt)	davA	5‑aminopentanamidase
*	?	NC_002947	522020 =	99 (1.380)	5 (0.070)	4/256	NT	5.1%	coding (707/1428 nt)	PP_0435	M23/M37 family peptidase
	?	NC_002947	522075 =	91 (1.330)					coding (652/1428 nt)	PP_0435	M23/M37 family peptidase
*	?	NC_002947	533510 =	NA (NA)	4 (0.060)	3/242	NT	7.9%	coding (775/1194 nt)	tufA	elongation factor Tu‑A
	?	NC_002947	= 533506	52 (0.730)					coding (771/1194 nt)	tufA	elongation factor Tu‑A
*	?	NC_002947	610922 =	NA (NA)	3 (0.050)	3/248	NT	NA	intergenic (‑77/‑182)	PP_0525/PP_0526	B12 family TonB‑dependent receptor/transposase
	?	NC_002947	610993 =	NA (NA)					intergenic (‑148/‑111)	PP_0525/PP_0526	B12 family TonB‑dependent receptor/transposase
*	?	NC_002947	611927 =	NA (NA)	10 (0.150)	8/250	NT	NA	coding (824/966 nt)	PP_0526	transposase
	?	NC_002947	611970 =	NA (NA)					coding (867/966 nt)	PP_0526	transposase
*	?	NC_002947	= 612221	NA (NA)	13 (0.250) +36 bp	6/196	NT	20.5%	intergenic (+152/+65)	PP_0526/dxs	transposase/1‑deoxyxylulose‑5‑phosphate synthase
	?	NC_002947	= 2436665	69 (0.960)					intergenic (+243/‑416)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
*	?	NC_002947	= 630402	67 (0.940)	4 (0.060)	4/254	NT	5.7%	coding (1291/1449 nt)	PP_0544	ethanolamine transporter
	?	NC_002947	= 630435	69 (1.020)					coding (1258/1449 nt)	PP_0544	ethanolamine transporter
*	?	NC_002947	= 641238	59 (0.820)	4 (0.060)	4/260	NT	5.6%	coding (614/1089 nt)	bdhA	2,3‑butanediol dehydrogenase
	?	NC_002947	= 641283	77 (1.110)					coding (569/1089 nt)	bdhA	2,3‑butanediol dehydrogenase
*	?	NC_002947	659912 =	87 (1.210)	6 (0.090)	5/250	NT	7.2%	coding (958/1914 nt)	speA	biosynthetic arginine decarboxylase
	?	NC_002947	660014 =	74 (1.110)					coding (1060/1914 nt)	speA	biosynthetic arginine decarboxylase
*	?	NC_002947	= 664568	85 (1.190)	5 (0.070)	5/256	NT	6.1%	coding (1434/4902 nt)	yfhM	lipoprotein
	?	NC_002947	= 664591	73 (1.070)					coding (1457/4902 nt)	yfhM	lipoprotein
*	?	NC_002947	= 709758	80 (1.120)	4 (0.060)	4/256	NT	5.2%	coding (503/951 nt)	ribF	bifunctional riboflavin kinase/FMN adenylyltransferase
	?	NC_002947	= 709781	69 (1.010)					coding (526/951 nt)	ribF	bifunctional riboflavin kinase/FMN adenylyltransferase
*	?	NC_002947	= 738610	39 (0.540)	5 (0.080)	5/244	NT	11.8%	coding (806/867 nt)	pilD	leader peptidase/N‑methyltransferase
	?	NC_002947	= 738640	39 (0.600)					coding (776/867 nt)	pilD	leader peptidase/N‑methyltransferase
*	?	NC_002947	= 741869	NA (NA)	3 (0.040)	3/256	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741902	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	741963 =	NA (NA)	5 (0.070)	3/254	NT	NA	coding (64/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	1426214 =	NA (NA)					coding (112/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 755229	62 (0.870)	5 (0.080)	5/246	NT	7.9%	intergenic (‑75/‑176)	PP_0645/PP_0646	hypothetical protein/hypothetical protein
	?	NC_002947	= 755247	60 (0.910)					intergenic (‑93/‑158)	PP_0645/PP_0646	hypothetical protein/hypothetical protein
*	?	NC_002947	755731 =	76 (1.060)	4 (0.060)	3/254	NT	5.4%	coding (327/1401 nt)	PP_0646	hypothetical protein
	?	NC_002947	755793 =	68 (1.000)					coding (389/1401 nt)	PP_0646	hypothetical protein
*	?	NC_002947	= 769351	64 (0.890)	5 (0.070)	4/252	NT	7.3%	coding (1429/1440 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_002947	= 769381	67 (1.000)					intergenic (+19/‑27)	mmuP/PP_0661	S‑methyl‑L‑methionine transporter/transcriptional regulator AmpR
*	?	NC_002947	= 785118	87 (1.210)	6 (0.090)	6/256	NT	6.5%	coding (808/3831 nt)	PP_0672	sensory box protein
	?	NC_002947	= 785221	89 (1.300)					coding (705/3831 nt)	PP_0672	sensory box protein
*	?	NC_002947	839233 =	63 (0.880)	3 (0.040)	3/260	NT	5.3%	coding (465/942 nt)	prs	ribose‑phosphate pyrophosphokinase
	?	NC_002947	839272 =	47 (0.680)					coding (426/942 nt)	prs	ribose‑phosphate pyrophosphokinase
*	?	NC_002947	839749 =	58 (0.810)	3 (0.040)	3/252	NT	5.1%	noncoding (72/75 nt)	PP_t69	tRNA‑Gln
	?	NC_002947	839822 =	57 (0.850)					intergenic (‑2/+19)	PP_t69/ispE	tRNA‑Gln/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
*	?	NC_002947	= 843982	82 (1.140)	5 (0.070)	5/256	NT	6.1%	coding (262/726 nt)	PP_0726	transferase
	?	NC_002947	= 844031	76 (1.110)					coding (213/726 nt)	PP_0726	transferase
*	?	NC_002947	851849 =	73 (1.020)	4 (0.060)	4/260	NT	5.3%	coding (628/1278 nt)	hemA	glutamyl‑tRNA reductase
	?	NC_002947	851917 =	73 (1.050)					coding (696/1278 nt)	hemA	glutamyl‑tRNA reductase
*	?	NC_002947	= 886391	99 (1.380)	5 (0.070)	5/262	NT	5.2%	coding (2302/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	= 886426	86 (1.230)					coding (2337/2718 nt)	PP_0767	LuxR family transcriptional regulator
*	?	NC_002947	893226 =	65 (0.910)	4 (0.060)	4/254	NT	5.7%	coding (489/2088 nt)	pta	phosphate acetyltransferase
	?	NC_002947	893271 =	71 (1.050)					coding (444/2088 nt)	pta	phosphate acetyltransferase
*	?	NC_002947	= 909536	81 (1.130)	5 (0.080)	5/248	NT	6.3%	coding (44/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
	?	NC_002947	= 909559	74 (1.120)					coding (67/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
*	?	NC_002947	= 916334	99 (1.380)	6 (0.090)	6/258	NT	5.8%	coding (1233/1491 nt)	PP_0798	GGDEF domain‑containing protein
	?	NC_002947	= 916420	99 (1.440)					coding (1147/1491 nt)	PP_0798	GGDEF domain‑containing protein
*	?	NC_002947	= 945385	62 (0.870)	8 (0.120)	5/250	NT	12.3%	coding (237/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 945422	56 (0.840)					coding (200/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	982773 =	65 (0.910)	5 (0.070)	5/262	NT	7.3%	coding (1650/1863 nt)	hscA	DnaK‑like molecular chaperone
	?	NC_002947	982817 =	64 (0.910)					coding (1694/1863 nt)	hscA	DnaK‑like molecular chaperone
*	?	NC_002947	1005210 =	95 (1.330)	5 (0.080)	4/248	NT	5.2%	coding (140/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005262 =	94 (1.420)					coding (192/2430 nt)	PP_0867	FecA‑like outer membrane receptor
*	?	NC_002947	= 1036001	74 (1.030)	5 (0.070)	5/254	NT	6.4%	coding (180/399 nt)	PP_0894	hypothetical protein
	?	NC_002947	= 1036045	76 (1.120)					coding (136/399 nt)	PP_0894	hypothetical protein
*	?	NC_002947	1037771 =	21 (0.290)	3 (0.050)	3/222	NT	18.0%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037849 =	10 (0.170)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1043472	66 (0.920)	4 (0.060)	4/256	NT	6.0%	coding (1282/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase
	?	NC_002947	= 1043490	63 (0.920)					coding (1300/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase
*	?	NC_002947	= 1052149	71 (0.990)	6 (0.090)	6/254	NT	7.9%	coding (1218/1428 nt)	PP_0910	hypothetical protein
	?	NC_002947	= 1052174	72 (1.060)					coding (1193/1428 nt)	PP_0910	hypothetical protein
*	?	NC_002947	= 1062756	74 (1.030)	8 (0.120)	5/248	NT	10.4%	intergenic (+26/+83)	PP_0919/xenB	hypothetical protein/xenobiotic reductase B
	?	NC_002947	= 1062818	70 (1.060)					intergenic (+88/+21)	PP_0919/xenB	hypothetical protein/xenobiotic reductase B
*	?	NC_002947	= 1084438	77 (1.070)	6 (0.090)	4/248	NT	7.1%	coding (263/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
	?	NC_002947	= 1084501	87 (1.310)					coding (326/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
*	?	NC_002947	1090249 =	67 (0.940)	4 (0.060)	4/256	NT	6.4%	coding (1110/1380 nt)	fumC‑I	class 2 fumarate hydratase
	?	NC_002947	1090289 =	53 (0.770)					coding (1150/1380 nt)	fumC‑I	class 2 fumarate hydratase
*	?	NC_002947	= 1098363	77 (1.070)	4 (0.060)	4/258	NT	5.3%	coding (216/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_002947	= 1098419	68 (0.990)					coding (160/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
*	?	NC_002947	= 1098607	56 (0.780)	8 (0.120)	5/254	NT	12.0%	coding (959/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase
	?	NC_002947	= 1098630	64 (0.940)					coding (936/975 nt)	kdsD	D‑arabinose 5‑phosphate isomerase
*	?	NC_002947	= 1118811	53 (0.740)	4 (0.060)	3/254	NT	6.5%	coding (1448/1494 nt)	pepA	cytosol aminopeptidase
	?	NC_002947	= 1118853	65 (0.960)					coding (1406/1494 nt)	pepA	cytosol aminopeptidase
*	?	NC_002947	1128396 =	102 (1.420)	10 (0.150)	8/246	NT	9.4%	coding (1155/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	NC_002947	1128436 =	99 (1.510)					coding (1115/2856 nt)	gcvP‑I	glycine dehydrogenase
*	?	NC_002947	1144390 =	74 (1.030)	8 (0.120)	8/250	NT	9.8%	coding (296/414 nt)	PP_1004	hypothetical protein
	?	NC_002947	1144443 =	79 (1.180)					coding (243/414 nt)	PP_1004	hypothetical protein
*	?	NC_002947	1164489 =	65 (0.910)	3 (0.040)	3/254	NT	5.3%	coding (796/855 nt)	yeaD	glucose‑6‑phosphate 1‑epimerase
	?	NC_002947	1164545 =	45 (0.660)					coding (852/855 nt) coding (860/864 nt)	yeaD hexR	glucose‑6‑phosphate 1‑epimerase DNA‑binding transcriptional regulator
*	?	NC_002947	1237854 =	81 (1.130)	6 (0.090)	6/260	NT	7.8%	coding (255/1110 nt)	PP_1078	ABC transporter ATP‑binding protein
	?	NC_002947	1237914 =	64 (0.920)					coding (195/1110 nt)	PP_1078	ABC transporter ATP‑binding protein
*	?	NC_002947	1265262 =	85 (1.190)	4 (0.060)	4/254	NT	5.0%	coding (158/1017 nt)	PP_1106	hypothetical protein
	?	NC_002947	1265302 =	70 (1.030)					coding (118/1017 nt)	PP_1106	hypothetical protein
*	?	NC_002947	1265490 =	53 (0.740)	3 (0.040)	3/258	NT	5.4%	intergenic (‑71/+56)	PP_1106/quiP	hypothetical protein/acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1265525 =	55 (0.800)					intergenic (‑106/+21)	PP_1106/quiP	hypothetical protein/acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	1267789 =	76 (1.060)	5 (0.070)	5/258	NT	6.2%	coding (199/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1267831 =	78 (1.130)					coding (157/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	1298266 =	NA (NA)	3 (0.040)	3/260	NT	NA	intergenic (+125/+304)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298312 =	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	= 1304060	86 (1.200)	5 (0.070)	5/262	NT	5.7%	coding (84/768 nt)	livG	ABC transporter ATP‑binding protein
	?	NC_002947	= 1304086	82 (1.170)					coding (58/768 nt)	livG	ABC transporter ATP‑binding protein
*	?	NC_002947	1319708 =	71 (0.990)	4 (0.060)	4/262	NT	5.5%	intergenic (+62/‑84)	PP_1152/PP_1153	membrane fusion efflux protein/putative lipoprotein
	?	NC_002947	1319753 =	69 (0.990)					intergenic (+107/‑39)	PP_1152/PP_1153	membrane fusion efflux protein/putative lipoprotein
*	?	NC_002947	= 1365283	70 (0.980)	5 (0.070)	3/250	NT	6.4%	coding (195/699 nt)	PP_1189	hypothetical protein
	?	NC_002947	= 1365320	80 (1.200)					coding (158/699 nt)	PP_1189	hypothetical protein
*	?	NC_002947	= 1375310	66 (0.920)	5 (0.070)	5/260	NT	6.9%	coding (930/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375342	71 (1.020)					coding (962/1911 nt)	kup	potassium transport system protein Kup
*	?	NC_002947	1393111 =	79 (1.100)	5 (0.070)	5/258	NT	6.2%	coding (96/525 nt)	ruvC	crossover junction endodeoxyribonuclease RuvC
	?	NC_002947	1393154 =	74 (1.070)					coding (139/525 nt)	ruvC	crossover junction endodeoxyribonuclease RuvC
*	?	NC_002947	= 1419549	29 (0.400)	21 (0.300)	16/262	NT	54.3%	intergenic (‑38/+98)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419636	7 (0.100)					intergenic (‑125/+11)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1419549 =	29 (0.400)	5 (0.090)	3/210	NT	26.5%	intergenic (‑38/+98)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419637 =	5 (0.090)					intergenic (‑126/+10)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1427107	NA (NA)	5 (0.070)	3/256	NT	NA	coding (1005/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1427157	NA (NA)					coding (1055/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1433054	57 (0.800)	4 (0.070)	4/228	NT	7.1%	intergenic (+42/+82)	xenA/PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
	?	NC_002947	= 1433106	57 (0.940)					intergenic (+94/+30)	xenA/PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
*	?	NC_002947	1489225 =	62 (0.870)	4 (0.060)	4/256	NT	6.2%	intergenic (+24/‑179)	ybgI/cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
	?	NC_002947	1489260 =	62 (0.910)					intergenic (+59/‑144)	ybgI/cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
*	?	NC_002947	= 1499458	23 (0.320)	10 (0.140)	8/264	NT	30.9%	intergenic (+35/‑129)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499495	22 (0.310)					intergenic (+72/‑92)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1507992 =	75 (1.050)	5 (0.070)	4/258	NT	6.9%	coding (393/462 nt)	sspB	ClpXP protease specificity‑enhancing factor
	?	NC_002947	1508041 =	62 (0.900)					coding (442/462 nt)	sspB	ClpXP protease specificity‑enhancing factor
*	?	NC_002947	1512954 =	80 (1.120)	6 (0.090)	6/256	NT	7.2%	noncoding (263/376 nt)	PP_mr18	RNaseP_bact_a ncRNA
	?	NC_002947	1512985 =	78 (1.140)					noncoding (294/376 nt)	PP_mr18	RNaseP_bact_a ncRNA
*	?	NC_002947	= 1567580	60 (0.840)	4 (0.060)	4/254	NT	6.4%	coding (64/1347 nt)	pcaK	4‑hydroxybenzoate transporter
	?	NC_002947	= 1567608	60 (0.880)					coding (92/1347 nt)	pcaK	4‑hydroxybenzoate transporter
*	?	NC_002947	= 1769850	61 (0.850)	5 (0.070)	5/256	NT	7.9%	coding (598/3000 nt)	PP_1579	hypothetical protein
	?	NC_002947	= 1769872	58 (0.850)					coding (620/3000 nt)	PP_1579	hypothetical protein
*	?	NC_002947	= 1799873	21 (0.290)	6 (0.100)	5/222	NT	28.3%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799915	13 (0.220)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1800382	90 (1.260)	5 (0.070)	4/254	NT	5.7%	coding (366/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	= 1800446	79 (1.160)					coding (430/3525 nt)	dnaEA	DNA polymerase III subunit alpha
*	?	NC_002947	= 1828572	96 (1.340)	6 (0.090)	6/262	NT	6.1%	coding (337/471 nt)	recX	regulatory protein RecX
	?	NC_002947	= 1828611	92 (1.310)					coding (376/471 nt)	recX	regulatory protein RecX
*	?	NC_002947	1908077 =	60 (0.840)	3 (0.040)	3/252	NT	5.2%	coding (445/759 nt)	PP_1708	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	1908164 =	53 (0.790)					coding (358/759 nt)	PP_1708	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	= 1942150	65 (0.910)	4 (0.060)	3/254	NT	5.9%	coding (692/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	= 1942176	67 (0.990)					coding (718/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
*	?	NC_002947	= 1968043	53 (0.740)	3 (0.050)	3/242	NT	5.2%	intergenic (‑54/+104)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	= 1968102	61 (0.940)					intergenic (‑113/+45)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	= 1975475	88 (1.230)	6 (0.090)	5/258	NT	7.3%	coding (407/1104 nt)	pheA	bifunctional chorismate mutase/prephenate dehydratase
	?	NC_002947	= 1975492	67 (0.970)					coding (424/1104 nt)	pheA	bifunctional chorismate mutase/prephenate dehydratase
*	?	NC_002947	2048794 =	55 (0.770)	7 (0.110)	4/234	NT	12.6%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048885 =	49 (0.780)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2073745 =	57 (0.800)	4 (0.060)	4/256	NT	6.2%	coding (244/381 nt)	PP_1849	hypothetical protein
	?	NC_002947	2073835 =	66 (0.960)					coding (154/381 nt)	PP_1849	hypothetical protein
*	?	NC_002947	= 2075067	65 (0.910)	5 (0.070)	3/252	NT	7.7%	coding (312/1188 nt)	ygaY	transporter YgaY
	?	NC_002947	= 2075102	59 (0.880)					coding (277/1188 nt)	ygaY	transporter YgaY
*	?	NC_002947	= 2082517	59 (0.820)	4 (0.060)	3/258	NT	6.1%	coding (717/954 nt)	PP_1861	LysR family transcriptional regulator
	?	NC_002947	= 2082554	67 (0.970)					coding (680/954 nt)	PP_1861	LysR family transcriptional regulator
*	?	NC_002947	= 2086250	NA (NA)	8 (0.120)	7/252	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086296	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087744	45 (0.630)	3 (0.040)	3/256	NT	5.9%	intergenic (+557/+361)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	4022795 =	52 (0.760)					intergenic (‑490/+178)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	= 2098975	59 (0.820)	7 (0.100)	7/252	NT	11.1%	coding (915/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2099067	57 (0.850)					coding (823/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	2099960 =	20 (0.280)	7 (0.120)	6/222	NT	25.7%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100055 =	24 (0.410)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2130654 =	60 (0.840)	4 (0.060)	4/258	NT	6.7%	coding (1545/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130733 =	54 (0.780)					coding (1466/2496 nt)	fimD	type I pili subunit FimD
*	?	NC_002947	= 2147917	59 (0.820)	5 (0.070)	3/252	NT	7.9%	coding (2603/3276 nt)	rne	ribonuclease E
	?	NC_002947	= 2147951	61 (0.910)					coding (2569/3276 nt)	rne	ribonuclease E
*	?	NC_002947	= 2149661	64 (0.890)	4 (0.060)	4/256	NT	6.2%	coding (859/3276 nt)	rne	ribonuclease E
	?	NC_002947	= 2149701	59 (0.860)					coding (819/3276 nt)	rne	ribonuclease E
*	?	NC_002947	2175086 =	61 (0.850)	3 (0.050)	3/248	NT	5.2%	coding (177/489 nt)	PP_1928	arsenate reductase
	?	NC_002947	2175143 =	52 (0.780)					coding (120/489 nt)	PP_1928	arsenate reductase
*	?	NC_002947	= 2243505	74 (1.030)	5 (0.070)	4/258	NT	6.1%	coding (523/882 nt)	PP_1979	hydrolase
	?	NC_002947	= 2243532	83 (1.200)					coding (550/882 nt)	PP_1979	hydrolase
*	?	NC_002947	= 2260214	72 (1.010)	5 (0.070)	5/256	NT	6.9%	coding (802/2736 nt)	fimV	motility protein FimV
	?	NC_002947	= 2260242	66 (0.960)					coding (830/2736 nt)	fimV	motility protein FimV
*	?	NC_002947	2269985 =	61 (0.850)	5 (0.070)	4/252	NT	7.4%	coding (788/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	2270043 =	68 (1.010)					coding (846/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
*	?	NC_002947	= 2270285	52 (0.730)	4 (0.060)	4/256	NT	6.5%	coding (1088/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	= 2270336	66 (0.960)					coding (1139/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
*	?	NC_002947	2285157 =	60 (0.840)	4 (0.060)	4/248	NT	7.2%	coding (410/972 nt)	PP_2013	hypothetical protein
	?	NC_002947	2285260 =	48 (0.720)					coding (513/972 nt)	PP_2013	hypothetical protein
*	?	NC_002947	2295775 =	51 (0.710)	10 (0.170)	9/220	NT	24.2%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295860 =	21 (0.360)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2301453 =	0 (0.000)	43 (0.610)	36/262	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301454	0 (0.000)	68 (0.960)	54/264	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	2317642 =	55 (0.770)	4 (0.060)	4/256	NT	7.3%	coding (1446/1548 nt)	PP_2038	long‑chain‑fatty‑acid‑‑CoA ligase
	?	NC_002947	2317686 =	49 (0.720)					coding (1490/1548 nt)	PP_2038	long‑chain‑fatty‑acid‑‑CoA ligase
*	?	NC_002947	= 2324480	56 (0.780)	4 (0.060)	4/254	NT	6.4%	coding (1168/1329 nt)	PP_2043	hypothetical protein
	?	NC_002947	= 2324524	63 (0.930)					coding (1212/1329 nt)	PP_2043	hypothetical protein
*	?	NC_002947	= 2361932	62 (0.870)	5 (0.070)	5/250	NT	9.2%	coding (1945/2724 nt)	PP_2076	hypothetical protein
	?	NC_002947	3838247 =	41 (0.610)					coding (1842/2673 nt)	PP_3388	hypothetical protein
*	?	NC_002947	= 2363512	47 (0.660)	4 (0.060)	4/256	NT	7.6%	coding (365/2724 nt)	PP_2076	hypothetical protein
	?	NC_002947	= 2363550	53 (0.770)					coding (327/2724 nt)	PP_2076	hypothetical protein
*	?	NC_002947	= 2387658	58 (0.810)	5 (0.070)	3/258	NT	8.0%	coding (418/1023 nt)	pyrD	dihydroorotate dehydrogenase
	?	NC_002947	= 2387692	59 (0.860)					coding (452/1023 nt)	pyrD	dihydroorotate dehydrogenase
*	?	NC_002947	= 2413147	NA (NA)	7 (0.100)	6/260	NT	NA	intergenic (+411/‑10)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	= 2413196	NA (NA)					coding (40/1302 nt)	PP_2114	transposase
*	?	NC_002947	= 2480389	86 (1.200)	7 (0.100)	7/256	NT	7.7%	coding (172/393 nt)	PP_2174	hypothetical protein
	?	NC_002947	= 2480422	86 (1.260)					coding (139/393 nt)	PP_2174	hypothetical protein
*	?	NC_002947	2486359 =	62 (0.870)	4 (0.060)	4/252	NT	6.7%	coding (951/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
	?	NC_002947	2486403 =	54 (0.800)					coding (995/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
*	?	NC_002947	2507110 =	69 (0.960)	5 (0.080)	5/248	NT	7.0%	intergenic (+8/+65)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase
	?	NC_002947	2507160 =	69 (1.040)					intergenic (+58/+15)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase
*	?	NC_002947	2522920 =	59 (0.820)	4 (0.060)	4/254	NT	6.5%	coding (4171/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	2522968 =	59 (0.870)					coding (4219/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
*	?	NC_002947	2537768 =	81 (1.130)	4 (0.060)	4/250	NT	5.4%	coding (1271/2916 nt)	mrpAB	K(+)/H(+) antiporter subunit A/B
	?	NC_002947	2537815 =	66 (0.990)					coding (1224/2916 nt)	mrpAB	K(+)/H(+) antiporter subunit A/B
*	?	NC_002947	2560684 =	83 (1.160)	4 (0.060)	4/250	NT	5.5%	coding (747/786 nt)	PP_2244	TauE‑like transmembrane protein
	?	NC_002947	2560755 =	61 (0.910)					coding (676/786 nt)	PP_2244	TauE‑like transmembrane protein
*	?	NC_002947	2567443 =	82 (1.140)	5 (0.070)	5/254	NT	6.5%	coding (485/879 nt)	PP_2250	LysR family transcriptional regulator
	?	NC_002947	2567519 =	66 (0.970)					coding (409/879 nt)	PP_2250	LysR family transcriptional regulator
*	?	NC_002947	= 2601777	54 (0.750)	4 (0.060)	4/252	NT	7.1%	coding (1254/1575 nt)	PP_2279	head‑to‑tail joining protein
	?	NC_002947	= 2601810	54 (0.800)					coding (1287/1575 nt)	PP_2279	head‑to‑tail joining protein
*	?	NC_002947	2616904 =	60 (0.840)	4 (0.060)	4/252	NT	6.9%	coding (1071/1641 nt)	PP_2288	tail fiber protein
	?	NC_002947	2616976 =	51 (0.760)					coding (1143/1641 nt)	PP_2288	tail fiber protein
*	?	NC_002947	= 2638199	70 (0.980)	4 (0.060)	4/254	NT	5.8%	coding (305/798 nt)	PP_2308	acyl‑CoA thioesterase II
	?	NC_002947	= 2638284	63 (0.930)					coding (390/798 nt)	PP_2308	acyl‑CoA thioesterase II
*	?	NC_002947	= 2653033	61 (0.850)	7 (0.100)	6/256	NT	10.3%	coding (420/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 2653064	64 (0.940)					coding (451/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase
*	?	NC_002947	2664008 =	25 (0.350)	5 (0.090)	5/220	NT	20.6%	intergenic (+33/‑130)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	2664089 =	18 (0.310)					intergenic (+114/‑49)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	= 2713658	72 (1.010)	6 (0.090)	5/254	NT	8.3%	coding (1446/3708 nt)	metH	cobalamin‑dependent methionine synthase
	?	NC_002947	= 2713686	65 (0.960)					coding (1418/3708 nt)	metH	cobalamin‑dependent methionine synthase
*	?	NC_002947	= 2716884	60 (0.840)	5 (0.070)	4/258	NT	7.6%	coding (1599/2301 nt)	cti	esterified fatty acid cis/trans isomerase
	?	NC_002947	= 2716904	64 (0.930)					coding (1619/2301 nt)	cti	esterified fatty acid cis/trans isomerase
*	?	NC_002947	= 2731823	58 (0.810)	4 (0.060)	4/256	NT	6.6%	coding (1160/2361 nt)	polB	DNA polymerase II
	?	NC_002947	= 2731855	58 (0.850)					coding (1192/2361 nt)	polB	DNA polymerase II
*	?	NC_002947	2764789 =	54 (0.750)	3 (0.040)	3/254	NT	5.9%	coding (213/1095 nt)	PP_2418	cobalamin ABC transporter substrate‑binding protein
	?	NC_002947	2764826 =	44 (0.650)					coding (176/1095 nt)	PP_2418	cobalamin ABC transporter substrate‑binding protein
*	?	NC_002947	= 2806825	45 (0.630)	3 (0.040)	3/250	NT	6.9%	coding (199/969 nt)	Nuh	ribonucleoside hydrolase
	?	NC_002947	= 2806859	39 (0.580)					coding (233/969 nt)	Nuh	ribonucleoside hydrolase
*	?	NC_002947	= 2813950	52 (0.730)	4 (0.060)	4/252	NT	6.9%	coding (87/2382 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta
	?	NC_002947	= 2813977	59 (0.880)					coding (114/2382 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta
*	?	NC_002947	= 2840194	50 (0.700)	4 (0.060)	4/256	NT	7.0%	coding (388/678 nt)	PP_2491	ThiJ/PfpI family protein
	?	NC_002947	= 2840207	58 (0.850)					coding (375/678 nt)	PP_2491	ThiJ/PfpI family protein
*	?	NC_002947	2891691 =	54 (0.750)	3 (0.040)	3/258	NT	6.0%	coding (150/372 nt)	PP_2546	membrane protein
	?	NC_002947	2891731 =	42 (0.610)					coding (110/372 nt)	PP_2546	membrane protein
*	?	NC_002947	2895376 =	59 (0.820)	5 (0.070)	5/256	NT	8.2%	coding (1035/1392 nt)	PP_2549	hypothetical protein
	?	NC_002947	2895416 =	55 (0.800)					coding (1075/1392 nt)	PP_2549	hypothetical protein
*	?	NC_002947	2964574 =	49 (0.680)	4 (0.060)	4/256	NT	8.1%	coding (296/942 nt)	fatD	ferric anguibactin transport system permease FatD
	?	NC_002947	2964621 =	44 (0.640)					coding (249/942 nt)	fatD	ferric anguibactin transport system permease FatD
*	?	NC_002947	= 2968028	63 (0.880)	4 (0.060)	4/262	NT	6.0%	coding (386/1794 nt)	PP_2596	ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 2968071	64 (0.910)					coding (343/1794 nt)	PP_2596	ABC transporter permease/ATP‑binding protein
*	?	NC_002947	2976750 =	53 (0.740)	4 (0.060)	4/250	NT	7.4%	coding (686/816 nt)	PP_2603	hypothetical protein
	?	NC_002947	2976817 =	50 (0.750)					coding (753/816 nt)	PP_2603	hypothetical protein
*	?	NC_002947	2995914 =	38 (0.530)	3 (0.040)	3/256	NT	8.1%	coding (930/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	2995963 =	32 (0.470)					coding (881/1017 nt)	PP_2620	hypothetical protein
*	?	NC_002947	3005248 =	50 (0.700)	5 (0.070)	5/258	NT	9.2%	coding (1829/3621 nt)	PP_2627	membrane protein
	?	NC_002947	3005329 =	50 (0.730)					coding (1910/3621 nt)	PP_2627	membrane protein
*	?	NC_002947	3029714 =	43 (0.600)	4 (0.060)	4/254	NT	9.3%	coding (1367/1653 nt)	pcaY	aromatic acid chemoreceptor
	?	NC_002947	3029774 =	37 (0.550)					coding (1427/1653 nt)	pcaY	aromatic acid chemoreceptor
*	?	NC_002947	= 3039329	41 (0.570)	4 (0.060)	4/254	NT	9.8%	coding (414/1344 nt)	PP_2651	MFS transporter
	?	NC_002947	= 3039372	35 (0.520)					coding (457/1344 nt)	PP_2651	MFS transporter
*	?	NC_002947	3041397 =	39 (0.540)	4 (0.060)	4/256	NT	10.6%	coding (595/819 nt)	PP_2653	Cro/CI family transcriptional regulator
	?	NC_002947	3041431 =	30 (0.440)					coding (561/819 nt)	PP_2653	Cro/CI family transcriptional regulator
*	?	NC_002947	3056149 =	61 (0.850)	3 (0.040)	3/252	NT	5.1%	coding (213/741 nt)	PP_2668	ABC transporter ATP‑binding protein
	?	NC_002947	3056199 =	55 (0.820)					coding (163/741 nt)	PP_2668	ABC transporter ATP‑binding protein
*	?	NC_002947	3066171 =	46 (0.640)	4 (0.060)	3/256	NT	8.2%	coding (305/924 nt)	PP_2678	hydrolase
	?	NC_002947	3066244 =	46 (0.670)					coding (378/924 nt)	PP_2678	hydrolase
*	?	NC_002947	= 3155823	47 (0.660)	3 (0.040)	3/254	NT	6.3%	coding (440/1104 nt)	PP_2771	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3155856	44 (0.650)					coding (407/1104 nt)	PP_2771	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 3170752	47 (0.660)	6 (0.090)	6/258	NT	11.3%	coding (2647/2880 nt)	PP_2782	class III pyridoxalphosphate dependent aminotransferase
	?	NC_002947	= 3170795	49 (0.710)					coding (2690/2880 nt)	PP_2782	class III pyridoxalphosphate dependent aminotransferase
*	?	NC_002947	3190461 =	38 (0.530)	3 (0.040)	3/256	NT	7.0%	coding (189/1380 nt)	PP_2799	class III aminotransferase
	?	NC_002947	3190500 =	43 (0.630)					coding (150/1380 nt)	PP_2799	class III aminotransferase
*	?	NC_002947	= 3211031	47 (0.660)	3 (0.040)	3/256	NT	5.8%	coding (68/1254 nt)	PP_2815	hypothetical protein
	?	NC_002947	= 3211067	53 (0.770)					coding (104/1254 nt)	PP_2815	hypothetical protein
*	?	NC_002947	= 3216667	53 (0.740)	3 (0.040)	3/254	NT	5.5%	coding (2582/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	= 3216711	52 (0.770)					coding (2626/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	3217292 =	50 (0.700)	3 (0.040)	3/256	NT	5.7%	coding (82/1407 nt)	oprJ	outer membrane protein OprJ
	?	NC_002947	3217326 =	51 (0.750)					coding (116/1407 nt)	oprJ	outer membrane protein OprJ
*	?	NC_002947	3233134 =	55 (0.770)	5 (0.070)	5/254	NT	9.7%	coding (322/948 nt)	GbpR	galactose‑binding protein regulator
	?	NC_002947	3233196 =	41 (0.600)					coding (384/948 nt)	GbpR	galactose‑binding protein regulator
*	?	NC_002947	3243072 =	52 (0.730)	3 (0.040)	3/254	NT	6.1%	coding (1149/2289 nt)	PP_2839	hypothetical protein
	?	NC_002947	3243119 =	43 (0.630)					coding (1196/2289 nt)	PP_2839	hypothetical protein
*	?	NC_002947	= 3293061	60 (0.840)	3 (0.040)	3/254	NT	5.2%	coding (2345/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	= 3293086	52 (0.770)					coding (2370/3675 nt)	PP_2893	hypothetical protein
*	?	NC_002947	= 3293731	48 (0.670)	3 (0.040)	3/260	NT	5.7%	coding (3015/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	= 3293766	53 (0.760)					coding (3050/3675 nt)	PP_2893	hypothetical protein
*	?	NC_002947	3328068 =	55 (0.770)	3 (0.040)	3/254	NT	6.1%	coding (138/1329 nt)	udg	UDP‑glucose 6‑dehydrogenase
	?	NC_002947	3328107 =	40 (0.590)					coding (99/1329 nt)	udg	UDP‑glucose 6‑dehydrogenase
*	?	NC_002947	= 3337434	46 (0.640)	4 (0.060)	4/256	NT	8.3%	coding (638/1047 nt)	PP_2934	hypothetical protein
	?	NC_002947	= 3337470	44 (0.640)					coding (674/1047 nt)	PP_2934	hypothetical protein
*	?	NC_002947	= 3387405	55 (0.770)	3 (0.040)	3/252	NT	5.1%	coding (186/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 3387439	61 (0.910)					coding (220/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	= 3390166	51 (0.710)	4 (0.060)	4/254	NT	8.0%	coding (326/804 nt)	PP_2992	hypothetical protein
	?	NC_002947	= 3390187	44 (0.650)					coding (305/804 nt)	PP_2992	hypothetical protein
*	?	NC_002947	3433953 =	73 (1.020)	5 (0.070)	5/254	NT	7.6%	coding (105/603 nt)	gpV	tail spike protein
	?	NC_002947	3434003 =	53 (0.780)					coding (155/603 nt)	gpV	tail spike protein
*	?	NC_002947	3513089 =	44 (0.610)	3 (0.040)	3/254	NT	7.1%	coding (1757/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	3513127 =	37 (0.550)					coding (1795/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	= 3525894	45 (0.630)	3 (0.040)	3/258	NT	6.3%	coding (340/609 nt)	lexA‑II	transcriptional repressor
	?	NC_002947	= 3525911	46 (0.670)					coding (357/609 nt)	lexA‑II	transcriptional repressor
*	?	NC_002947	= 3556464	59 (0.820)	4 (0.060)	4/256	NT	6.8%	coding (881/1188 nt)	PP_3140	group 2 family glycosyl transferase
	?	NC_002947	= 3556485	54 (0.790)					coding (902/1188 nt)	PP_3140	group 2 family glycosyl transferase
*	?	NC_002947	3606473 =	64 (0.890)	4 (0.060)	4/258	NT	6.2%	coding (289/951 nt)	PP_3181	site‑specific recombinase
	?	NC_002947	3606514 =	60 (0.870)					coding (248/951 nt)	PP_3181	site‑specific recombinase
*	?	NC_002947	3611282 =	65 (0.910)	4 (0.060)	4/256	NT	6.2%	coding (2402/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	3611340 =	59 (0.860)					coding (2344/3396 nt)	mcoA	Mn(II) copper oxidase A
*	?	NC_002947	= 3647622	72 (1.010)	4 (0.060)	3/252	NT	5.9%	intergenic (‑559/‑95)	PP_3213/PP_3214	ABC transporter substrate‑binding protein/hypothetical protein
	?	NC_002947	= 3647672	59 (0.880)					intergenic (‑609/‑45)	PP_3213/PP_3214	ABC transporter substrate‑binding protein/hypothetical protein
*	?	NC_002947	= 3670801	50 (0.700)	3 (0.040)	3/258	NT	5.4%	coding (332/726 nt)	PP_5591	hypothetical protein
	?	NC_002947	= 3670835	56 (0.810)					coding (298/726 nt)	PP_5591	hypothetical protein
*	?	NC_002947	= 3673395	70 (0.980)	4 (0.060)	4/258	NT	5.7%	coding (443/891 nt)	PP_3237	universal stress protein family protein
	?	NC_002947	= 3673431	64 (0.930)					coding (479/891 nt)	PP_3237	universal stress protein family protein
*	?	NC_002947	= 3690761	56 (0.780)	5 (0.080)	5/248	NT	8.7%	coding (462/660 nt)	PP_3256	group 2 family glycosyl transferase
	?	NC_002947	= 3690788	53 (0.800)					coding (435/660 nt)	PP_3256	group 2 family glycosyl transferase
*	?	NC_002947	= 3693091	70 (0.980)	4 (0.060)	4/254	NT	5.3%	coding (535/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
	?	NC_002947	= 3693114	78 (1.150)					coding (512/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
*	?	NC_002947	= 3700179	65 (0.910)	6 (0.090)	6/258	NT	8.5%	coding (264/774 nt)	ybhP‑I	phosphohydrolase
	?	NC_002947	= 3700226	66 (0.960)					coding (217/774 nt)	ybhP‑I	phosphohydrolase
*	?	NC_002947	3799827 =	70 (0.980)	4 (0.060)	4/252	NT	6.4%	coding (162/1125 nt)	PP_3360	membrane protein
	?	NC_002947	3799911 =	51 (0.760)					coding (246/1125 nt)	PP_3360	membrane protein
*	?	NC_002947	= 3823349	72 (1.010)	4 (0.060)	4/250	NT	5.2%	coding (841/951 nt)	kguK	2‑ketogluconokinase
	?	NC_002947	= 3823375	78 (1.170)					coding (815/951 nt)	kguK	2‑ketogluconokinase
*	?	NC_002947	= 3859573	45 (0.630)	4 (0.060)	4/252	NT	8.0%	coding (407/753 nt)	cobM	precorrin‑4 C(11)‑methyltransferase
	?	NC_002947	= 3859599	50 (0.740)					coding (433/753 nt)	cobM	precorrin‑4 C(11)‑methyltransferase
*	?	NC_002947	3864770 =	59 (0.820)	5 (0.070)	5/256	NT	8.0%	coding (875/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein
	?	NC_002947	3864808 =	59 (0.860)					coding (837/1320 nt)	PP_3414	methyl‑accepting chemotaxis transducer/sensory box protein
*	?	NC_002947	= 3870425	61 (0.850)	4 (0.060)	3/256	NT	6.2%	coding (494/1428 nt)	PP_3419	sigma‑54 dependent transcriptional regulator/response regulator
	?	NC_002947	= 3870443	63 (0.920)					coding (476/1428 nt)	PP_3419	sigma‑54 dependent transcriptional regulator/response regulator
*	?	NC_002947	= 3884242	49 (0.680)	3 (0.040)	3/254	NT	5.9%	coding (127/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	= 3884269	50 (0.740)					coding (154/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
*	?	NC_002947	= 3895238	56 (0.780)	3 (0.040)	3/254	NT	5.6%	intergenic (‑180/‑112)	yegH/PP_3438	putative transporter/membrane protein
	?	NC_002947	= 3895264	48 (0.710)					intergenic (‑206/‑86)	yegH/PP_3438	putative transporter/membrane protein
*	?	NC_002947	= 3911503	64 (0.890)	4 (0.060)	4/248	NT	6.1%	coding (813/840 nt)	PP_3451	hypothetical protein
	?	NC_002947	= 3911534	65 (0.980)					intergenic (+4/‑121)	PP_3451/PP_3452	hypothetical protein/GGDEF domain‑containing protein
*	?	NC_002947	3918203 =	53 (0.740)	4 (0.060)	4/254	NT	7.6%	coding (1985/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	3918272 =	47 (0.690)					coding (2054/3129 nt)	mexB	multidrug resistance protein MexB
*	?	NC_002947	3924753 =	50 (0.700)	3 (0.040)	3/258	NT	5.5%	coding (61/1431 nt)	peaB	quinohemoprotein amine dehydrogenase modification protein
	?	NC_002947	3924794 =	54 (0.780)					coding (20/1431 nt)	peaB	quinohemoprotein amine dehydrogenase modification protein
*	?	NC_002947	= 3947940	18 (0.250)	6 (0.110)	5/212	NT	26.5%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3947969	19 (0.340)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3975755	57 (0.800)	4 (0.060)	4/256	NT	6.1%	coding (22/591 nt)	PP_3505	hypothetical protein
	?	NC_002947	= 3975786	68 (0.990)					intergenic (‑10/+68)	PP_3505/PP_3506	hypothetical protein/magnesium chelatase subunit ChII
*	?	NC_002947	= 3989295	65 (0.910)	4 (0.060)	4/256	NT	6.1%	coding (1813/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	= 3989343	61 (0.890)					coding (1861/2085 nt)	oplA	5‑oxoprolinase A
*	?	NC_002947	= 4014614	65 (0.910)	5 (0.070)	5/252	NT	7.6%	intergenic (+91/‑31)	PP_3542/PP_3543	hypothetical protein/iron‑sulfur cluster‑binding protein
	?	NC_002947	= 4014630	60 (0.890)					intergenic (+107/‑15)	PP_3542/PP_3543	hypothetical protein/iron‑sulfur cluster‑binding protein
*	?	NC_002947	= 4022487	38 (0.530)	3 (0.040)	3/262	NT	6.4%	intergenic (‑182/+486)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
	?	NC_002947	= 4022523	50 (0.710)					intergenic (‑218/+450)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	4022743 =	57 (0.800)	4 (0.060)	3/252	NT	6.7%	intergenic (‑438/+230)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
	?	NC_002947	4022835 =	58 (0.860)					intergenic (‑530/+138)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	= 4036023	60 (0.840)	3 (0.040)	3/252	NT	5.2%	coding (1074/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 4036076	52 (0.770)					coding (1127/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
*	?	NC_002947	4059271 =	76 (1.060)	4 (0.060)	3/246	NT	5.0%	coding (1628/1638 nt)	pgm	phosphoglucomutase
	?	NC_002947	4059335 =	82 (1.250)					coding (1564/1638 nt)	pgm	phosphoglucomutase
*	?	NC_002947	= 4065591	62 (0.870)	4 (0.060)	4/260	NT	6.1%	coding (369/1491 nt)	PP_3582	RND transporter outer membrane protein
	?	NC_002947	= 4065640	62 (0.890)					coding (320/1491 nt)	PP_3582	RND transporter outer membrane protein
*	?	NC_002947	= 4066773	73 (1.020)	4 (0.060)	4/254	NT	5.5%	coding (2291/3108 nt)	mdtC	multidrug transporter membrane protein
	?	NC_002947	= 4066800	69 (1.020)					coding (2264/3108 nt)	mdtC	multidrug transporter membrane protein
*	?	NC_002947	= 4077627	42 (0.590)	4 (0.060)	4/256	NT	7.5%	coding (972/1188 nt)	PP_3588	Bcr/CflA family multidrug resistance transporter
	?	NC_002947	= 4077665	58 (0.850)					coding (1010/1188 nt)	PP_3588	Bcr/CflA family multidrug resistance transporter
*	?	NC_002947	4093560 =	53 (0.740)	4 (0.060)	4/262	NT	6.3%	coding (557/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
	?	NC_002947	4093624 =	67 (0.960)					coding (621/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
*	?	NC_002947	= 4121661	53 (0.740)	4 (0.060)	4/250	NT	7.8%	coding (126/789 nt)	PP_3624	hypothetical protein
	?	NC_002947	= 4121682	45 (0.670)					coding (105/789 nt)	PP_3624	hypothetical protein
*	?	NC_002947	4129990 =	66 (0.920)	7 (0.100)	6/258	NT	10.9%	coding (607/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase
	?	NC_002947	4130062 =	51 (0.740)					coding (679/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase
*	?	NC_002947	= 4173137	67 (0.940)	6 (0.090)	4/254	NT	8.4%	coding (771/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
	?	NC_002947	= 4173157	68 (1.000)					coding (791/825 nt)	PP_3671	aldo/keto reductase family oxidoreductase
*	?	NC_002947	4186181 =	55 (0.770)	3 (0.040)	3/254	NT	5.9%	intergenic (+97/‑473)	PP_3682/PP_3683	hypothetical protein/hypothetical protein
	?	NC_002947	4186230 =	44 (0.650)					intergenic (+146/‑424)	PP_3682/PP_3683	hypothetical protein/hypothetical protein
*	?	NC_002947	4235852 =	61 (0.850)	5 (0.070)	4/260	NT	7.6%	coding (921/936 nt)	catA‑I	catechol 1,2‑dioxygenase
	?	NC_002947	4235890 =	62 (0.890)					coding (883/936 nt)	catA‑I	catechol 1,2‑dioxygenase
*	?	NC_002947	= 4262151	67 (0.940)	5 (0.070)	5/252	NT	6.4%	coding (611/2460 nt)	PP_3734	ABC transporter permease
	?	NC_002947	= 4262198	83 (1.230)					coding (564/2460 nt)	PP_3734	ABC transporter permease
*	?	NC_002947	4294575 =	69 (0.960)	4 (0.060)	4/252	NT	5.5%	coding (798/1302 nt)	opdN	outer‑membrane porin D
	?	NC_002947	4294610 =	72 (1.070)					coding (763/1302 nt)	opdN	outer‑membrane porin D
*	?	NC_002947	4329440 =	55 (0.770)	3 (0.040)	3/258	NT	5.3%	coding (371/570 nt)	PP_3800	hypothetical protein
	?	NC_002947	4329476 =	54 (0.780)					coding (407/570 nt)	PP_3800	hypothetical protein
*	?	NC_002947	= 4337054	45 (0.630)	3 (0.040)	3/256	NT	6.3%	coding (161/885 nt)	PP_3811	LysR family transcriptional regulator
	?	NC_002947	= 4337105	46 (0.670)					coding (110/885 nt)	PP_3811	LysR family transcriptional regulator
*	?	NC_002947	4355573 =	61 (0.850)	4 (0.060)	4/256	NT	6.9%	coding (91/1092 nt)	modC	molybdate ABC transporter ATP‑binding protein ModC
	?	NC_002947	4355650 =	49 (0.720)					coding (168/1092 nt)	modC	molybdate ABC transporter ATP‑binding protein ModC
*	?	NC_002947	4443473 =	56 (0.780)	4 (0.060)	4/258	NT	6.4%	coding (509/1314 nt)	nicT	metabolite transport protein NicT
	?	NC_002947	4443511 =	64 (0.930)					coding (471/1314 nt)	nicT	metabolite transport protein NicT
*	?	NC_002947	4475019 =	84 (1.170)	6 (0.090)	6/254	NT	7.1%	coding (517/1536 nt)	PP_3964	transposase
	?	NC_002947	4475055 =	77 (1.130)					coding (481/1536 nt)	PP_3964	transposase
*	?	NC_002947	= 4520708	52 (0.730)	4 (0.060)	4/256	NT	6.9%	coding (1030/1257 nt)	icd	NADP(+)‑specific isocitrate dehydrogenase
	?	NC_002947	= 4520754	58 (0.850)					coding (984/1257 nt)	icd	NADP(+)‑specific isocitrate dehydrogenase
*	?	NC_002947	= 4526692	85 (1.190)	5 (0.070)	3/258	NT	5.8%	coding (502/627 nt)	PP_4015	HflD‑like high frequency lysogenization protein
	?	NC_002947	= 4526735	81 (1.170)					coding (545/627 nt)	PP_4015	HflD‑like high frequency lysogenization protein
*	?	NC_002947	= 4551973	15 (0.210)	9 (0.170)	8/202	NT	37.3%	intergenic (+67/+114)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
	?	NC_002947	= 4552024	19 (0.350)					intergenic (+118/+63)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
*	?	NC_002947	4552519 =	72 (1.010)	5 (0.070)	5/254	NT	7.1%	coding (90/522 nt)	rutR	transcriptional regulator, TetR family
	?	NC_002947	4552553 =	63 (0.930)					coding (56/522 nt)	rutR	transcriptional regulator, TetR family
*	?	NC_002947	= 4609857	57 (0.800)	4 (0.060)	4/248	NT	7.2%	coding (344/876 nt)	PP_4081	type IV/VI secretion system protein
	?	NC_002947	= 4609877	51 (0.770)					coding (364/876 nt)	PP_4081	type IV/VI secretion system protein
*	?	NC_002947	4626524 =	NA (NA)	10 (0.140)	4/268	NT	NA	coding (980/1533 nt)	PP_4091	transposase
	?	NC_002947	4626581 =	NA (NA)					coding (923/1533 nt)	PP_4091	transposase
*	?	NC_002947	4642108 =	52 (0.730)	6 (0.090)	6/256	NT	10.4%	coding (51/897 nt)	PP_4107	LysR family transcriptional regulator
	?	NC_002947	4642142 =	54 (0.790)					coding (85/897 nt)	PP_4107	LysR family transcriptional regulator
*	?	NC_002947	4647557 =	27 (0.380)	5 (0.100)	5/190	NT	27.0%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647665 =	8 (0.160)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4695719 =	102 (1.420)	5 (0.070)	5/254	NT	5.1%	coding (565/1224 nt)	PP_4155	amine oxidase
	?	NC_002947	4695775 =	90 (1.330)					coding (509/1224 nt)	PP_4155	amine oxidase
*	?	NC_002947	4700127 =	76 (1.060)	4 (0.060)	4/248	NT	5.3%	coding (561/2655 nt)	kdpD	sensor protein
	?	NC_002947	4700178 =	74 (1.120)					coding (510/2655 nt)	kdpD	sensor protein
*	?	NC_002947	4721153 =	60 (0.840)	6 (0.090)	4/258	NT	9.8%	coding (443/726 nt)	PP_4178	dienelactone hydrolase family protein
	?	NC_002947	4721214 =	53 (0.770)					coding (382/726 nt)	PP_4178	dienelactone hydrolase family protein
*	?	NC_002947	4738166 =	73 (1.020)	5 (0.070)	5/256	NT	6.7%	coding (204/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
	?	NC_002947	4738204 =	70 (1.020)					coding (166/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
*	?	NC_002947	= 4758391	77 (1.070)	4 (0.060)	4/258	NT	5.3%	coding (1393/1623 nt)	pvdP	pyoverdine biosynthesis‑like protein
	?	NC_002947	= 4758496	68 (0.990)					coding (1288/1623 nt)	pvdP	pyoverdine biosynthesis‑like protein
*	?	NC_002947	4763819 =	70 (0.980)	4 (0.060)	4/252	NT	5.5%	coding (217/1659 nt)	pvdE	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4763926 =	72 (1.070)					coding (324/1659 nt)	pvdE	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 4765593	69 (0.960)	9 (0.130)	8/256	NT	11.5%	coding (246/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	= 4765635	73 (1.070)					coding (288/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
*	?	NC_002947	4766011 =	53 (0.740)	3 (0.040)	3/256	NT	5.4%	coding (664/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	4766109 =	55 (0.800)					coding (762/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
*	?	NC_002947	4773304 =	75 (1.050)	5 (0.070)	4/258	NT	7.0%	coding (5963/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773349 =	60 (0.870)					coding (5918/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4785919	61 (0.850)	5 (0.070)	5/256	NT	7.8%	coding (1395/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	= 4785973	60 (0.880)					coding (1341/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4800284	65 (0.910)	4 (0.060)	4/252	NT	6.3%	coding (154/471 nt)	PP_4227	hypothetical protein
	?	NC_002947	= 4800324	57 (0.850)					coding (114/471 nt)	PP_4227	hypothetical protein
*	?	NC_002947	= 4802485	87 (1.210)	9 (0.130)	8/252	NT	9.4%	coding (829/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
	?	NC_002947	= 4802518	91 (1.350)					coding (796/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
*	?	NC_002947	4808173 =	7 (0.100)	13 (0.180)	8/264	NT	34.7%	intergenic (‑282/‑273)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 4945372	42 (0.600)					intergenic (+732/+66)	PP_5673/flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
*	?	NC_002947	= 4820219	63 (0.880)	4 (0.060)	4/260	NT	5.9%	coding (10971/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4820262	66 (0.950)					coding (10928/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4860126 =	97 (1.350)	5 (0.080)	3/246	NT	5.4%	coding (924/2331 nt)	ligA	DNA ligase
	?	NC_002947	4860172 =	87 (1.320)					coding (878/2331 nt)	ligA	DNA ligase
*	?	NC_002947	4893553 =	33 (0.460)	4 (0.070)	4/214	NT	17.7%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893632 =	11 (0.190)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	5000481 =	62 (0.870)	3 (0.040)	3/254	NT	5.5%	coding (1334/1383 nt)	PP_4407	gamma‑aminobutyrate transporter
	?	NC_002947	5000541 =	44 (0.650)					intergenic (+11/‑1675)	PP_4407/PP_4409	gamma‑aminobutyrate transporter/site‑specific recombinase
*	?	NC_002947	5104994 =	69 (0.960)	5 (0.080)	5/248	NT	7.1%	intergenic (+17/+97)	yhhS/ydiJ	carbohydrate efflux transporter/putative oxidoreductase
	?	NC_002947	5105059 =	68 (1.030)					intergenic (+82/+32)	yhhS/ydiJ	carbohydrate efflux transporter/putative oxidoreductase
*	?	NC_002947	= 5137375	74 (1.030)	5 (0.070)	5/256	NT	6.6%	coding (227/894 nt)	PP_4522	LysR family transcriptional regulator
	?	NC_002947	= 5137408	70 (1.020)					coding (194/894 nt)	PP_4522	LysR family transcriptional regulator
*	?	NC_002947	5210219 =	60 (0.840)	4 (0.060)	3/236	NT	7.2%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5210310 =	51 (0.810)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5315015	78 (1.090)	6 (0.090)	6/244	NT	7.4%	intergenic (‑2/+66)	msrP/PP_4677	methionine sulfoxide reductase catalytic subunit/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
	?	NC_002947	= 5315042	79 (1.210)					intergenic (‑29/+39)	msrP/PP_4677	methionine sulfoxide reductase catalytic subunit/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
*	?	NC_002947	5345668 =	72 (1.010)	4 (0.060)	4/260	NT	5.1%	coding (1066/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	5345743 =	80 (1.150)					coding (1141/1935 nt)	acsA‑II	acetyl‑CoA synthetase
*	?	NC_002947	= 5380510	76 (1.060)	5 (0.070)	5/258	NT	5.6%	coding (92/405 nt)	fur	ferric iron uptake global transcriptional repressor Fur
	?	NC_002947	= 5380557	97 (1.410)					coding (45/405 nt)	fur	ferric iron uptake global transcriptional repressor Fur
*	?	NC_002947	5404329 =	90 (1.260)	4 (0.060)	3/236	NT	5.4%	intergenic (‑627/+90)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5404391 =	62 (0.980)					intergenic (‑689/+28)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	5409285 =	63 (0.880)	4 (0.060)	3/254	NT	6.2%	coding (1591/2037 nt)	stcD	N‑methylproline demethylase
	?	NC_002947	5409332 =	61 (0.900)					coding (1544/2037 nt)	stcD	N‑methylproline demethylase
*	?	NC_002947	= 5449583	94 (1.310)	6 (0.090)	6/260	NT	6.4%	coding (452/999 nt)	ybeZ	nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 5449610	85 (1.220)					coding (479/999 nt)	ybeZ	nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 5476790	74 (1.030)	4 (0.060)	4/260	NT	5.0%	coding (1020/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
	?	NC_002947	= 5476814	79 (1.140)					coding (1044/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
*	?	NC_002947	= 5492556	69 (0.960)	4 (0.060)	4/260	NT	5.5%	coding (1460/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	= 5492606	71 (1.020)					coding (1410/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
*	?	NC_002947	5501416 =	52 (0.730)	8 (0.130)	6/236	NT	13.9%	intergenic (+27/‑192)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
	?	NC_002947	5501494 =	53 (0.840)					intergenic (+105/‑114)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
*	?	NC_002947	= 5510220	76 (1.060)	4 (0.060)	4/258	NT	5.1%	coding (419/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	= 5510250	77 (1.120)					coding (449/1488 nt)	urtB	urea ABC transporter permease
*	?	NC_002947	= 5528599	85 (1.190)	5 (0.070)	5/252	NT	5.6%	coding (188/765 nt)	ydfG	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase
	?	NC_002947	= 5528622	89 (1.320)					coding (165/765 nt)	ydfG	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase
*	?	NC_002947	5545321 =	NA (NA)	90 (1.280)	63/264	NT	100%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	0 (0.000)					coding (19/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	= 5545666	NA (NA)	93 (1.330)	72/262	NT	100%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	0 (0.000)					coding (20/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	5594092 =	9 (0.130)	12 (0.210)	8/212	NT	49.9%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594185 =	17 (0.300)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5594119	9 (0.130)	5 (0.090)	3/212	NT	29.3%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594156	17 (0.300)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5609685	68 (0.950)	4 (0.060)	3/258	NT	5.4%	coding (830/906 nt)	PP_4929	LysR family transcriptional regulator
	?	NC_002947	= 5609715	76 (1.100)					coding (800/906 nt)	PP_4929	LysR family transcriptional regulator
*	?	NC_002947	5648818 =	87 (1.210)	4 (0.060)	4/248	NT	5.1%	coding (248/540 nt)	ygjP	metal‑dependent hydrolase
	?	NC_002947	5648861 =	67 (1.010)					coding (205/540 nt)	ygjP	metal‑dependent hydrolase
*	?	NC_002947	= 5692546	81 (1.130)	5 (0.070)	5/260	NT	5.9%	intergenic (+15/‑155)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	= 5692640	82 (1.180)					intergenic (+109/‑61)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
*	?	NC_002947	5710269 =	58 (0.810)	3 (0.040)	3/260	NT	5.2%	coding (4287/4761 nt)	PP_5009	hypothetical protein
	?	NC_002947	5710306 =	54 (0.780)					coding (4324/4761 nt)	PP_5009	hypothetical protein
*	?	NC_002947	= 5717240	70 (0.980)	4 (0.060)	4/258	NT	6.2%	intergenic (+40/‑62)	PP_5019/PP_5020	16S rRNA (uracil(1498)‑N(3))‑methyltransferase/methyl‑accepting chemotaxis protein
	?	NC_002947	= 5717290	54 (0.780)					intergenic (+90/‑12)	PP_5019/PP_5020	16S rRNA (uracil(1498)‑N(3))‑methyltransferase/methyl‑accepting chemotaxis protein
*	?	NC_002947	5734096 =	22 (0.310)	4 (0.060)	4/258	NT	14.0%	intergenic (‑122/+35)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	5734131 =	28 (0.410)					coding (1533/1533 nt)	hutH	histidine ammonia‑lyase
*	?	NC_002947	5773382 =	67 (0.940)	4 (0.060)	4/258	NT	6.0%	intergenic (‑420/‑56)	betT‑I/betI	choline transporter/choline‑responsive transcriptional repressor BetI
	?	NC_002947	5773423 =	61 (0.880)					intergenic (‑461/‑15)	betT‑I/betI	choline transporter/choline‑responsive transcriptional repressor BetI
*	?	NC_002947	= 5789214	55 (0.770)	4 (0.060)	4/254	NT	7.8%	coding (371/1278 nt)	ynfM	efflux transporter
	?	NC_002947	= 5789242	42 (0.620)					coding (399/1278 nt)	ynfM	efflux transporter
*	?	NC_002947	= 5816767	74 (1.030)	4 (0.060)	4/256	NT	5.6%	coding (577/624 nt)	PP_5092	NLP/P60 protein
	?	NC_002947	= 5816800	65 (0.950)					coding (610/624 nt)	PP_5092	NLP/P60 protein
*	?	NC_002947	= 5834927	72 (1.010)	4 (0.060)	4/252	NT	5.1%	coding (1205/1491 nt)	PP_5113	Zn‑dependent peptidase
	?	NC_002947	= 5834977	80 (1.190)					coding (1255/1491 nt)	PP_5113	Zn‑dependent peptidase
*	?	NC_002947	5855296 =	66 (0.920)	4 (0.060)	4/258	NT	6.6%	coding (1316/1392 nt)	tcyP	sodium/cystine symporter
	?	NC_002947	5855345 =	50 (0.730)					coding (1365/1392 nt)	tcyP	sodium/cystine symporter
*	?	NC_002947	= 5865354	76 (1.060)	4 (0.060)	4/246	NT	5.2%	coding (797/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
	?	NC_002947	= 5865380	75 (1.140)					coding (771/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
*	?	NC_002947	= 5868146	66 (0.920)	4 (0.060)	4/254	NT	6.1%	coding (418/807 nt)	lgt	prolipoprotein diacylglyceryl transferase
	?	NC_002947	= 5868165	61 (0.900)					coding (399/807 nt)	lgt	prolipoprotein diacylglyceryl transferase
*	?	NC_002947	5870261 =	33 (0.460)	3 (0.050)	3/210	NT	12.3%	intergenic (+22/+112)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	5870354 =	17 (0.300)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5896614 =	78 (1.090)	6 (0.090)	4/256	NT	7.6%	coding (775/1029 nt)	sbp‑II	sulfate ABC transporter substrate‑binding protein
	?	NC_002947	5896653 =	71 (1.040)					coding (736/1029 nt)	sbp‑II	sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	5897734 =	33 (0.460)	4 (0.060)	4/250	NT	10.4%	intergenic (‑134/+100)	PP_5172/PP_5173	hypothetical protein/RND family transporter
	?	NC_002947	5897845 =	38 (0.570)					coding (3043/3054 nt)	PP_5173	RND family transporter
*	?	NC_002947	5914157 =	11 (0.150)	6 (0.110)	4/212	NT	31.0%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914253 =	18 (0.320)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914184	8 (0.110)	11 (0.190)	11/212	NT	47.5%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914224	18 (0.320)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5927278 =	78 (1.090)	4 (0.060)	4/256	NT	5.3%	coding (617/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	5927332 =	69 (1.010)					coding (563/1623 nt)	PP_5195	iron ABC transporter permease
*	?	NC_002947	5929521 =	86 (1.200)	4 (0.060)	4/256	NT	5.3%	coding (867/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
	?	NC_002947	5929590 =	61 (0.890)					coding (798/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
*	?	NC_002947	= 5934487	91 (1.270)	6 (0.090)	5/258	NT	7.0%	coding (151/321 nt)	PP_5202	cell division protein
	?	NC_002947	= 5934569	73 (1.060)					coding (233/321 nt)	PP_5202	cell division protein
*	?	NC_002947	= 5976554	93 (1.300)	5 (0.070)	5/252	NT	5.4%	coding (355/1491 nt)	yifB	ATP‑dependent chelatase
	?	NC_002947	= 5976597	88 (1.310)					coding (398/1491 nt)	yifB	ATP‑dependent chelatase
*	?	NC_002947	5999313 =	75 (1.050)	4 (0.060)	4/238	NT	6.4%	intergenic (‑168/‑153)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	5999373 =	50 (0.790)					intergenic (‑228/‑93)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	= 6000932	19 (0.270)	3 (0.050)	3/208	NT	16.3%	intergenic (+39/+70)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	= 6000966	16 (0.290)					intergenic (+73/+36)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6010687	80 (1.120)	7 (0.100)	5/260	NT	7.7%	coding (166/1668 nt)	PP_5263	GGDEF domain‑containing protein
	?	NC_002947	= 6010714	91 (1.310)					coding (139/1668 nt)	PP_5263	GGDEF domain‑containing protein
*	?	NC_002947	= 6047967	57 (0.800)	4 (0.060)	4/256	NT	6.0%	coding (442/1050 nt)	PP_5300	LysR family transcriptional regulator
	?	NC_002947	= 6048039	72 (1.050)					coding (514/1050 nt)	PP_5300	LysR family transcriptional regulator
*	?	NC_002947	6055813 =	71 (0.990)	4 (0.060)	4/244	NT	6.1%	intergenic (+34/‑61)	tonB/oxyR	TonB energy transducing system subunit TonB/oxidative and nitrosative stress transcriptional dual regulator
	?	NC_002947	6055876 =	59 (0.910)					coding (3/927 nt)	oxyR	oxidative and nitrosative stress transcriptional dual regulator
*	?	NC_002947	6070727 =	73 (1.020)	4 (0.060)	4/258	NT	5.4%	intergenic (‑83/+80)	PP_5324/phoU	two‑component system response regulator/phosphate transport‑associated protein
	?	NC_002947	6070765 =	71 (1.030)					intergenic (‑121/+42)	PP_5324/phoU	two‑component system response regulator/phosphate transport‑associated protein
*	?	NC_002947	= 6079905	85 (1.190)	5 (0.070)	3/258	NT	5.4%	coding (319/399 nt)	PP_5331	acyl‑CoA thioesterase
	?	NC_002947	= 6079927	93 (1.350)					coding (341/399 nt)	PP_5331	acyl‑CoA thioesterase
*	?	NC_002947	= 6086740	99 (1.380)	6 (0.090)	5/256	NT	5.7%	coding (262/1071 nt)	oruR	ornithine utilization transcriptional regulator
	?	NC_002947	= 6086765	103 (1.510)					coding (287/1071 nt)	oruR	ornithine utilization transcriptional regulator
*	?	NC_002947	= 6096455	101 (1.410)	6 (0.090)	5/252	NT	6.0%	coding (243/1416 nt)	pycA	pyruvate carboxylase subunit A
	?	NC_002947	= 6096480	93 (1.380)					coding (218/1416 nt)	pycA	pyruvate carboxylase subunit A
*	?	NC_002947	= 6117733	66 (0.920)	4 (0.060)	4/258	NT	6.0%	coding (42/471 nt)	PP_5367	transketolase domain‑containing protein
	?	NC_002947	= 6117802	62 (0.900)					intergenic (‑28/+68)	PP_5367/PP_5368	transketolase domain‑containing protein/MFS transporter