breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	4,977	C→T	9.5%	intergenic (‑596/+35)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	4,980	A→G	8.0%	intergenic (‑599/+32)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	6,429	Δ1 bp	5.3%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	58,747	T→A	7.6%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	7.5%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,591	T→C	6.5%	I228V (ATT→GTT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,598	T→G	8.3%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	8.5%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,610	G→A	6.8%	N221N (AAC→AAT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	76,886	A→G	7.1%	F220L (TTC→CTC)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	85,066	T→C	15.1%	intergenic (+44/+86)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,074	A→G	13.2%	intergenic (+52/+78)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,077	T→G	12.9%	intergenic (+55/+75)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,078:1	+T	13.7%	intergenic (+56/+74)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,081	T→G	16.8%	intergenic (+59/+71)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,088	C→A	13.3%	intergenic (+66/+64)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,091	Δ1 bp	13.7%	intergenic (+69/+61)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,093	C→A	14.0%	intergenic (+71/+59)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,096	C→T	14.3%	intergenic (+74/+56)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,104	G→A	12.7%	intergenic (+82/+48)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	86,240	G→T	7.5%	L160M (CTG→ATG)	PP_0075 ←	choline sulfate transporter
RA	88,991	C→T	8.2%	L109L (TTG→TTA)	betC ←	choline‑sulfatase
RA	97,592	G→T	10.5%	intergenic (+21/+15)	PP_0090 → / ← PP_0091	hypothetical protein/putative lipoprotein
RA	97,594	A→C	13.9%	intergenic (+23/+13)	PP_0090 → / ← PP_0091	hypothetical protein/putative lipoprotein
RA	101,802	A→C	10.4%	K208Q (AAG→CAG) ‡	prlC →	oligopeptidase A
RA	101,803	A→T	11.6%	K208M (AAG→ATG) ‡	prlC →	oligopeptidase A
RA	101,804	G→T	10.7%	K208N (AAG→AAT) ‡	prlC →	oligopeptidase A
RA	123,699	C→T	5.7%	A57T (GCA→ACA)	znuB ←	zinc ABC transporter permease
RA	124,971	T→A	10.7%	S49C (AGC→TGC)	PP_0119 ←	zinc uptake regulation protein Zur
RA	124,972	C→G	10.7%	Q48H (CAG→CAC) ‡	PP_0119 ←	zinc uptake regulation protein Zur
RA	124,973	T→A	10.3%	Q48L (CAG→CTG) ‡	PP_0119 ←	zinc uptake regulation protein Zur
RA	134,397	A→C	7.9%	D98A (GAT→GCT) ‡	PP_0129 →	GGDEF domain‑containing protein
RA	134,398	T→A	8.1%	D98E (GAT→GAA) ‡	PP_0129 →	GGDEF domain‑containing protein
RA	134,399	G→T	7.7%	A99S (GCG→TCG)	PP_0129 →	GGDEF domain‑containing protein
RA	147,023	T→C	7.4%	Y261H (TAT→CAT)	PP_0138 →	membrane protein
RA	155,543	G→T	6.0%	intergenic (‑248/+35)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	158,824	T→C	6.6%	Q522R (CAG→CGG)	PP_0149 ←	hypothetical protein
RA	162,281	A→T	13.3%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	12.2%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,292	G→T	5.5%	intergenic (‑326/+48)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	163,968:1	+T	6.7%	intergenic (‑135/+52)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	163,973	T→A	6.5%	intergenic (‑140/+47)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	163,978	Δ1 bp	6.7%	intergenic (‑145/+42)	scpC ← / ← pntB	propionyl‑CoA:succinate CoA transferase/pyridine nucleotide transhydrogenase subunit beta
RA	182,035	A→T	7.0%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	29.0%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	6.8%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	6.8%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	41.5%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	13.6%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	15.3%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	17.2%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	15.8%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	6.5%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	14.4%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	7.7%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	5.9%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	9.3%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	18.9%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	20.4%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	14.6%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	14.0%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	225,366	C→T	7.5%	A99T (GCC→ACC)	PP_0173 ←	transcriptional factor‑like protein
RA	242,088	A→C	5.5%	intergenic (+20/‑203)	PP_0189 → / → PP_0190	heme biosynthesis protein/disulfide bond formation protein B
RA	242,100	T→C	6.6%	intergenic (+32/‑191)	PP_0189 → / → PP_0190	heme biosynthesis protein/disulfide bond formation protein B
RA	263,186	G→A	8.1%	intergenic (+421/‑64)	PP_0211 → / → gabD‑I	hypothetical protein/succinate‑semialdehyde dehydrogenase
RA	263,189	T→C	7.8%	intergenic (+424/‑61)	PP_0211 → / → gabD‑I	hypothetical protein/succinate‑semialdehyde dehydrogenase
RA	268,744	T→A	6.5%	intergenic (‑75/+25)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	268,746	G→C	6.8%	intergenic (‑77/+23)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	272,007	A→T	13.2%	intergenic (+12/+17)	PP_0218 → / ← metP	sensory box protein/L,D‑methionine D‑methionine ABC transporter permease
RA	272,008	A→T	13.2%	intergenic (+13/+16)	PP_0218 → / ← metP	sensory box protein/L,D‑methionine D‑methionine ABC transporter permease
RA	272,009	A→T	13.7%	intergenic (+14/+15)	PP_0218 → / ← metP	sensory box protein/L,D‑methionine D‑methionine ABC transporter permease
RA	274,139	T→G	6.9%	K144T (AAG→ACG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,145	A→T	9.4%	L142Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,148	A→T	9.5%	L141Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,151	A→T	9.5%	L140Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	274,154	A→T	9.5%	L139Q (CTG→CAG)	PP_0221 ←	methionine ABC transporter substrate‑binding protein
RA	278,742:1	+A	100%	intergenic (‑237/+77)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	284,586	T→A	13.8%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	14.1%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	292,606	C→G	7.6%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	297,350	T→G	7.2%	E218D (GAA→GAC) ‡	gshA ←	glutamate‑‑cysteine ligase
RA	297,351	T→A	7.1%	E218V (GAA→GTA) ‡	gshA ←	glutamate‑‑cysteine ligase
RA	297,352	C→A	7.2%	E218* (GAA→TAA) ‡	gshA ←	glutamate‑‑cysteine ligase
RA	298,992	G→A	8.7%	R712C (CGC→TGC)	yhgF ←	transcriptional accessory protein
RA	307,865:1	+C	100%	intergenic (+880/‑989)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	310,280	A→T	5.7%	I699N (ATC→AAC)	PP_0256 ←	putative oxidoreductase
RA	322,133	G→A	15.5%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,140	T→C	13.7%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	326,068	T→G	8.2%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	334,737	T→A	5.1%	intergenic (‑52/+236)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	336,124:1	+T	100%	coding (209/237 nt)	PP_0278 →	hypothetical protein
RA	337,809	A→G	19.6%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,816:1	+A	15.9%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819	A→C	17.9%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	C→G	19.1%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	G→T	15.0%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,827	Δ1 bp	14.9%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,836	C→T	16.1%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	338,044	Δ1 bp	6.2%	coding (525/690 nt)	PP_0280 ←	amino acid ABC transporter permease
RA	344,887	G→T	6.4%	A239D (GCC→GAC)	mutY ←	A/G‑specific adenine glycosylase
RA	345,705	G→C	8.7%	A714G (GCC→GGC)	PP_0287 ←	hypothetical protein
RA	345,707	C→A	9.1%	L713L (CTG→CTT)	PP_0287 ←	hypothetical protein
RA	353,067	A→G	100%	intergenic (+34/+84)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	362,777	T→C	8.7%	T236A (ACC→GCC)	lcdH ←	L‑carnitine dehydrogenase
RA	374,739	G→T	8.3%	R10L (CGC→CTC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,742	C→G	8.6%	A11G (GCC→GGC)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	374,745	A→C	9.1%	E12A (GAG→GCG)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	375,297	T→G	6.3%	L196R (CTG→CGG)	PP_0312 →	electron transfer flavoprotein subunit alpha
RA	378,809	C→T	8.9%	K202K (AAG→AAA)	gbcA ←	glycine‑betaine dioxygenase subunit
RA	381,856	T→A	10.9%	D230V (GAC→GTC)	PP_0317 ←	methyl‑accepting chemotaxis transducer
RA	388,722	T→A	8.2%	L198Q (CTG→CAG)	soxB →	sarcosine oxidase subunit beta
RA	394,897	G→A	6.8%	P93P (CCG→CCA)	fdhA →	formaldehyde dehydrogenase
RA	395,848	T→G	9.5%	intergenic (+30/+174)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	401,802	T→G	5.9%	intergenic (+329/+100)	PP_0334 → / ← PP_0335	transposase/glutathione S‑transferase family protein
RA	401,804	C→A	5.7%	intergenic (+331/+98)	PP_0334 → / ← PP_0335	transposase/glutathione S‑transferase family protein
RA	402,065	A→C	10.0%	I154S (ATC→AGC)	PP_0335 ←	glutathione S‑transferase family protein
RA	402,067	C→G	9.8%	L153L (CTG→CTC) ‡	PP_0335 ←	glutathione S‑transferase family protein
RA	402,069	G→T	10.2%	L153M (CTG→ATG) ‡	PP_0335 ←	glutathione S‑transferase family protein
RA	406,026	C→G	6.7%	V11L (GTG→CTG)	PP_0337 ←	sensory box protein
RA	406,027	A→C	6.7%	R10R (CGT→CGG)	PP_0337 ←	sensory box protein
RA	406,031	C→G	6.3%	S9T (AGC→ACC)	PP_0337 ←	sensory box protein
RA	422,059	T→C	6.3%	Q630R (CAG→CGG)	PP_0348 ←	hypothetical protein
RA	422,067	C→G	6.5%	L627L (CTG→CTC) ‡	PP_0348 ←	hypothetical protein
RA	422,069	G→T	6.7%	L627M (CTG→ATG) ‡	PP_0348 ←	hypothetical protein
RA	422,119	T→A	5.9%	E610V (GAG→GTG)	PP_0348 ←	hypothetical protein
RA	422,123	G→C	7.0%	P609A (CCC→GCC)	PP_0348 ←	hypothetical protein
RA	432,012	A→G	8.7%	F101S (TTC→TCC)	PP_0354 ←	CBS domain‑containing protein
RA	432,016	A→G	8.0%	C100R (TGC→CGC)	PP_0354 ←	CBS domain‑containing protein
RA	432,019	C→T	8.3%	E99K (GAG→AAG)	PP_0354 ←	CBS domain‑containing protein
RA	441,599	G→T	14.5%	L160L (CTG→CTT)	bioF →	8‑amino‑7‑oxononanoate synthase
RA	441,601	A→T	12.2%	D161V (GAC→GTC)	bioF →	8‑amino‑7‑oxononanoate synthase
RA	441,603	A→C	11.9%	K162Q (AAG→CAG)	bioF →	8‑amino‑7‑oxononanoate synthase
RA	441,610	T→C	12.0%	V164A (GTC→GCC) ‡	bioF →	8‑amino‑7‑oxononanoate synthase
RA	441,611	C→T	12.0%	V164V (GTC→GTT) ‡	bioF →	8‑amino‑7‑oxononanoate synthase
RA	445,088	C→G	13.8%	intergenic (+61/‑227)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	459,899	C→T	10.8%	intergenic (‑45/+34)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	459,904	A→C	7.8%	intergenic (‑50/+29)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	459,905	G→T	8.0%	intergenic (‑51/+28)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	459,910	A→G	8.1%	intergenic (‑56/+23)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	460,892	T→C	7.1%	S525G (AGC→GGC)	pqqF ←	coenzyme PQQ synthesis protein F
RA	471,066	T→C	6.4%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,067	G→A	6.5%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	478,795	G→A	7.5%	A225V (GCG→GTG)	cca ←	multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
RA	484,688	C→T	9.6%	intergenic (‑250/+33)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,692	G→C	9.6%	intergenic (‑254/+29)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,696	A→G	9.5%	intergenic (‑258/+25)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	496,096	T→A	8.2%	intergenic (‑63/‑33)	PP_0408 ← / → PP_0409	hypothetical protein/two‑component system sensor histidine kinase
RA	499,203	A→G	100%	intergenic (+47/‑249)	uhpA → / → PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
RA	516,279	A→T	8.7%	L238Q (CTG→CAG)	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	516,282	A→T	6.3%	L237Q (CTG→CAG)	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	517,031	A→C	6.6%	intergenic (‑40/+28)	PP_0429 ← / ← PP_0430	short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein
RA	519,619	C→A	11.7%	G336G (GGC→GGA)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	519,621	T→A	11.6%	L337Q (CTG→CAG)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	519,623	T→G	11.7%	S338A (TCC→GCC)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	524,336	A→G	9.1%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,349	G→C	13.6%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	12.4%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,365	C→T	9.8%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,606	G→A	9.3%	intergenic (+473/‑343)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	529,676	T→G	13.8%	intergenic (+12/‑108)	PP_23SC → / → PP_5SC	23S ribosomal RNA/5S ribosomal RNA
RA	529,677	A→T	14.7%	intergenic (+13/‑107)	PP_23SC → / → PP_5SC	23S ribosomal RNA/5S ribosomal RNA
RA	529,678	C→A	13.1%	intergenic (+14/‑106)	PP_23SC → / → PP_5SC	23S ribosomal RNA/5S ribosomal RNA
RA	536,279	C→T	10.7%	noncoding (179/190 nt)	PP_mr06 ←	P27 ncRNA
RA	536,280	A→G	10.5%	noncoding (178/190 nt)	PP_mr06 ←	P27 ncRNA
RA	537,451	T→C	7.0%	noncoding (47/66 nt)	PP_mr07 →	P26 ncRNA
RA	537,458	T→A	7.6%	noncoding (54/66 nt)	PP_mr07 →	P26 ncRNA
RA	537,461	T→A	8.0%	noncoding (57/66 nt)	PP_mr07 →	P26 ncRNA
RA	546,008	A→T	7.7%	intergenic (+48/‑25)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	550,549	C→G	6.9%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	554,152:1	+C	6.2%	coding (92/714 nt)	rpsC →	30S ribosomal protein S3
RA	554,157	Δ1 bp	6.2%	coding (97/714 nt)	rpsC →	30S ribosomal protein S3
RA	554,939	T→A	7.0%	R51R (CGT→CGA)	rplP →	50S ribosomal protein L16
RA	555,765	T→G	10.5%	S28A (TCG→GCG)	rplN →	50S ribosomal protein L14
RA	555,768	C→A	10.7%	H29N (CAC→AAC)	rplN →	50S ribosomal protein L14
RA	558,477	A→C	6.3%	E21D (GAA→GAC)	rplR →	50S ribosomal protein L18
RA	558,483	A→G	6.2%	E23E (GAA→GAG)	rplR →	50S ribosomal protein L18
RA	563,005	C→A	7.1%	P30T (CCT→ACT) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	563,006	C→G	6.6%	P30R (CCT→CGT) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	563,007	T→G	6.7%	P30P (CCT→CCG) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	566,888	G→A	13.5%	L870L (CTG→TTG)	uvrA ←	uvrABC excinuclease protein A
RA	566,889	T→C	13.3%	Q869Q (CAA→CAG)	uvrA ←	uvrABC excinuclease protein A
RA	571,215	G→C	5.3%	V63L (GTT→CTT)	ssb →	single‑stranded DNA‑binding protein
RA	583,396	T→C	8.6%	V421A (GTG→GCG) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,397	G→C	8.5%	V421V (GTG→GTC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,398	G→A	8.3%	A422T (GCC→ACC)	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,719	C→G	10.2%	P529A (CCC→GCC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,720	C→G	9.0%	P529R (CCC→CGC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,721	C→G	9.0%	P529P (CCC→CCG) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	587,076	C→G	7.3%	P43R (CCG→CGG)	PP_0497 →	Cro/CI family transcriptional regulator
RA	590,361	G→A	6.3%	G162D (GGC→GAC)	PP_0500 →	dTDP‑4‑rhamnose reductase‑like protein
RA	600,031	A→C	6.3%	C5G (TGC→GGC)	PP_0512 ←	hypothetical protein
RA	605,121	G→A	6.9%	R145H (CGC→CAC)	thiL →	thiamin monophosphate kinase
RA	605,126	A→T	7.2%	S147C (AGC→TGC)	thiL →	thiamin monophosphate kinase
RA	605,131	T→C	6.6%	G148G (GGT→GGC)	thiL →	thiamin monophosphate kinase
RA	612,844	G→C	8.4%	Y446* (TAC→TAG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	612,859	G→C	8.4%	S441R (AGC→AGG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	614,489	A→T	5.9%	L253Q (CTG→CAG)	ispA ←	farnesyl diphosphate synthase
RA	614,492	A→T	5.9%	L252Q (CTG→CAG)	ispA ←	farnesyl diphosphate synthase
RA	616,450	A→C	6.7%	noncoding (72/142 nt)	PP_mr11 ←	FMN regulatory region
RA	616,451	T→A	6.9%	noncoding (71/142 nt)	PP_mr11 ←	FMN regulatory region
RA	616,452	G→T	6.9%	noncoding (70/142 nt)	PP_mr11 ←	FMN regulatory region
RA	618,346	C→T	9.4%	V75M (GTG→ATG)	PP_0532 ←	hypothetical protein
RA	618,358	A→G	13.1%	S71P (TCG→CCG)	PP_0532 ←	hypothetical protein
RA	621,600	G→A	7.0%	A244T (GCC→ACC)	PP_0535 →	ferric siderophore receptor
RA	626,569	C→A	6.4%	L208L (CTG→CTT)	dedA ←	inner membrane protein
RA	635,840	G→T	7.1%	E22* (GAA→TAA) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	635,841	A→T	7.1%	E22V (GAA→GTA) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	635,842	A→C	6.9%	E22D (GAA→GAC) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	640,261	T→C	6.4%	I162V (ATC→GTC)	PP_0551 ←	MORN domain‑containing protein
RA	640,263	A→T	6.3%	L161Q (CTG→CAG)	PP_0551 ←	MORN domain‑containing protein
RA	640,265	G→A	6.4%	D160D (GAC→GAT)	PP_0551 ←	MORN domain‑containing protein
RA	653,098	C→T	8.1%	A549T (GCC→ACC)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	660,940	G→T	7.8%	intergenic (+72/‑95)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	660,941	A→T	7.8%	intergenic (+73/‑94)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	684,841	Δ1 bp	6.9%	coding (1406/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	684,846:1	+A	7.1%	coding (1401/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,326	G→T	6.8%	R307R (CGC→CGA) ‡	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,327	C→T	6.8%	R307H (CGC→CAC) ‡	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,330	A→G	6.6%	L306S (TTG→TCG) ‡	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,331	A→C	6.7%	L306V (TTG→GTG) ‡	cadA‑II ←	cadmium translocating P‑type ATPase
RA	699,722	A→G	43.8%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	704,278	G→T	6.9%	R124L (CGG→CTG)	PP_5745 →	paraquat‑inducible protein A
RA	704,281	A→C	6.4%	Q125P (CAG→CCG)	PP_5745 →	paraquat‑inducible protein A
RA	718,457	C→G	9.8%	intergenic (+27/+50)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	718,459	A→G	8.5%	intergenic (+29/+48)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	718,461	G→A	16.1%	intergenic (+31/+46)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	718,462	C→G	8.9%	intergenic (+32/+45)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	733,645	A→T	9.5%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,646	A→T	9.5%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,647	A→T	10.7%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	747,418	C→T	7.5%	intergenic (‑545/‑249)	PP_0638 ← / → PP_5448	transposase/hypothetical protein
RA	747,423	T→G	6.9%	intergenic (‑550/‑244)	PP_0638 ← / → PP_5448	transposase/hypothetical protein
RA	747,424	C→G	6.9%	intergenic (‑551/‑243)	PP_0638 ← / → PP_5448	transposase/hypothetical protein
RA	747,425	C→A	6.9%	intergenic (‑552/‑242)	PP_0638 ← / → PP_5448	transposase/hypothetical protein
RA	753,230	T→C	7.4%	intergenic (‑469/‑514)	PP_0641 ← / → PP_5452	hypothetical protein/hypothetical protein
RA	754,762	T→G	8.9%	intergenic (‑18/+150)	PP_0643 ← / ← PP_0645	hypothetical protein/hypothetical protein
RA	766,609	A→T	9.8%	Q34L (CAG→CTG)	metB →	cystathionine gamma‑synthase
RA	766,614	C→A	9.8%	P36T (CCG→ACG)	metB →	cystathionine gamma‑synthase
RA	766,621	T→G	9.4%	V38G (GTG→GGG)	metB →	cystathionine gamma‑synthase
RA	766,626	A→T	9.6%	S40C (AGC→TGC)	metB →	cystathionine gamma‑synthase
RA	769,700	A→G	5.9%	K98R (AAG→AGG)	PP_0661 →	transcriptional regulator AmpR
RA	772,178	T→C	10.2%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,179	T→G	10.8%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	C→A	9.3%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,183	G→A	9.9%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	788,581	C→A	12.6%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,583	A→T	10.4%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,584	A→T	10.4%	intergenic (+34/‑179)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	T→G	10.5%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	793,656	T→C	8.6%	intergenic (‑21/‑203)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	793,657	C→G	8.2%	intergenic (‑22/‑202)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	793,658	G→A	8.6%	intergenic (‑23/‑201)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	797,013	T→G	8.7%	M9R (ATG→AGG)	PP_0682 →	inner membrane protein
RA	797,015	T→C	8.9%	Y10H (TAT→CAT)	PP_0682 →	inner membrane protein
RA	797,018	G→A	8.7%	A11T (GCC→ACC) ‡	PP_0682 →	inner membrane protein
RA	797,020	C→A	8.3%	A11A (GCC→GCA) ‡	PP_0682 →	inner membrane protein
RA	797,509	G→A	9.3%	intergenic (+33/‑44)	PP_0682 → / → PP_0683	inner membrane protein/hypothetical protein
RA	797,982	T→G	8.5%	intergenic (+40/‑46)	PP_0683 → / → fklB‑I	hypothetical protein/FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	797,983	T→A	7.9%	intergenic (+41/‑45)	PP_0683 → / → fklB‑I	hypothetical protein/FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	797,986	T→A	8.3%	intergenic (+44/‑42)	PP_0683 → / → fklB‑I	hypothetical protein/FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	797,987	C→A	7.9%	intergenic (+45/‑41)	PP_0683 → / → fklB‑I	hypothetical protein/FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	821,621	A→G	9.1%	E331G (GAA→GGA)	PP_0707 →	hypothetical protein
RA	821,679	G→C	6.5%	M350I (ATG→ATC)	PP_0707 →	hypothetical protein
RA	828,160	T→A	7.4%	A208A (GCT→GCA)	ppkB →	polyphosphate kinase
RA	828,921	C→G	7.7%	T178S (ACT→AGT)	kefB‑I →	CPA2 family Kef‑type potassium/proton antiporter
RA	844,722	G→A	7.5%	L41F (CTT→TTT)	PP_0727 ←	hypothetical protein
RA	848,503	G→A	7.8%	L23F (CTT→TTT)	PP_0730 ←	hypothetical protein
RA	848,507	T→C	8.1%	K21K (AAA→AAG)	PP_0730 ←	hypothetical protein
RA	849,322	C→G	8.3%	G366R (GGC→CGC)	pcs ←	phosphatidylcholine synthase
RA	853,762	G→A	8.7%	R62H (CGT→CAT) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	853,763	T→C	8.7%	R62R (CGT→CGC) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	854,035	A→G	6.3%	Q153R (CAG→CGG)	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	856,078	G→A	8.0%	A9A (GCG→GCA)	pagL‑I →	lipid A 3‑O‑deacylase
RA	856,081	T→C	7.9%	A10A (GCT→GCC)	pagL‑I →	lipid A 3‑O‑deacylase
RA	863,898	T→A	9.4%	intergenic (+15/+21)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,899	T→A	9.3%	intergenic (+16/+20)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,900	T→A	9.3%	intergenic (+17/+19)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	865,403	G→T	9.2%	A141A (GCC→GCA)	upp ←	uracil phosphoribosyltransferase
RA	865,406	A→C	8.9%	V140V (GTT→GTG)	upp ←	uracil phosphoribosyltransferase
RA	874,698	A→G	7.0%	I93V (ATC→GTC) ‡	PP_0759 →	hypothetical protein
RA	874,699	T→G	7.0%	I93S (ATC→AGC) ‡	PP_0759 →	hypothetical protein
RA	874,702	C→A	7.2%	A94D (GCC→GAC) ‡	PP_0759 →	hypothetical protein
RA	874,703	C→T	7.2%	A94A (GCC→GCT) ‡	PP_0759 →	hypothetical protein
RA	875,283	A→C	6.5%	intergenic (+22/+24)	PP_0759 → / ← PP_0760	hypothetical protein/membrane protein
RA	875,285	G→T	6.7%	intergenic (+24/+22)	PP_0759 → / ← PP_0760	hypothetical protein/membrane protein
RA	895,207	G→C	9.8%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	9.6%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,216	G→A	9.6%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→C	10.0%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	908,340	G→T	5.1%	A290D (GCC→GAC)	cra ←	catabolite DNA‑binding transcriptional regulator
RA	908,350	T→G	5.0%	N287H (AAT→CAT)	cra ←	catabolite DNA‑binding transcriptional regulator
RA	908,352	A→C	5.1%	V286G (GTC→GGC)	cra ←	catabolite DNA‑binding transcriptional regulator
RA	913,036	T→C	6.6%	F231L (TTC→CTC)	fruK →	1‑phosphofructokinase monomer
RA	913,888	G→A	9.7%	G200D (GGC→GAC)	fruA →	PTS fructose transporter subunit IIBC
RA	914,163	A→T	8.5%	K292* (AAA→TAA)	fruA →	PTS fructose transporter subunit IIBC
RA	926,250	T→G	7.0%	N126H (AAT→CAT)	PP_0805 ←	outer membrane efflux protein
RA	931,497	G→T	6.1%	L4709I (CTC→ATC)	PP_0806 ←	surface adhesion protein
RA	931,502	A→T	6.0%	V4707D (GTC→GAC)	PP_0806 ←	surface adhesion protein
RA	931,507	A→C	6.0%	D4705E (GAT→GAG)	PP_0806 ←	surface adhesion protein
RA	938,626	C→T	8.5%	V2332V (GTG→GTA)	PP_0806 ←	surface adhesion protein
RA	943,609	C→G	9.7%	G671G (GGG→GGC) ‡	PP_0806 ←	surface adhesion protein
RA	943,610	C→G	11.0%	G671A (GGG→GCG) ‡	PP_0806 ←	surface adhesion protein
RA	943,611	C→G	9.7%	G671R (GGG→CGG) ‡	PP_0806 ←	surface adhesion protein
RA	961,699	A→T	8.3%	L239Q (CTG→CAG)	selD ←	selenide, water dikinase
RA	961,705	A→G	10.7%	V237A (GTC→GCC)	selD ←	selenide, water dikinase
RA	1,001,193	A→T	6.5%	Q57L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,001,196	A→T	6.4%	Q58L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,004,526	A→T	9.0%	Q184L (CAG→CTG)	PP_0866 →	transmembrane sensor
RA	1,019,419	T→C	5.1%	M204V (ATG→GTG)	dppD ←	dipeptide ABC transporter ATP‑binding protein
RA	1,020,927	G→C	6.7%	S13R (AGC→AGG)	dppC ←	dipeptide ABC transporter permease
RA	1,020,931	G→C	6.8%	A12G (GCC→GGC)	dppC ←	dipeptide ABC transporter permease
RA	1,025,784	T→G	16.4%	D395A (GAC→GCC)	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,025,786	C→G	14.8%	A394A (GCG→GCC) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,025,788	C→A	15.0%	A394S (GCG→TCG) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,026,484	G→C	13.9%	L162V (CTG→GTG)	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,026,485	G→C	14.0%	T161T (ACC→ACG) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,026,486	G→C	13.8%	T161S (ACC→AGC) ‡	dppA‑II ←	dipeptide ABC transporter substrate‑binding protein
RA	1,041,939	A→C	10.8%	E141A (GAG→GCG)	colR →	two‑component system response regulator
RA	1,041,942	T→G	10.8%	V142G (GTT→GGT)	colR →	two‑component system response regulator
RA	1,041,945	C→A	9.5%	T143N (ACC→AAC)	colR →	two‑component system response regulator
RA	1,041,948	G→T	9.5%	R144L (CGC→CTC)	colR →	two‑component system response regulator
RA	1,046,227	C→G	8.7%	M717I (ATG→ATC)	PP_0906 ←	RND family multidrug transporter
RA	1,070,246:1	+G	88.3%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,246:2	+A	88.3%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,260	G→C	15.7%	intergenic (+60/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,263	G→C	14.5%	intergenic (+63/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,071,037	G→C	6.8%	L117V (CTG→GTG)	PP_0928 ←	K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,071,038	G→C	6.8%	H116Q (CAC→CAG)	PP_0928 ←	K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,075,795	C→A	14.3%	A171A (GCC→GCA)	mreB →	cell wall structural actin‑like protein MreB
RA	1,075,798	T→G	13.8%	A172A (GCT→GCG)	mreB →	cell wall structural actin‑like protein MreB
RA	1,088,803	T→C	6.7%	W16R (TGG→CGG)	PP_0943 →	hypothetical protein
RA	1,104,396	T→C	6.8%	V385V (GTT→GTC)	murA →	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
RA	1,107,556	G→C	12.1%	K236N (AAG→AAC)	hisC →	histidinol‑phosphate aminotransferase
RA	1,109,140	T→A	6.6%	D38V (GAC→GTC)	PP_0968 ←	hypothetical protein
RA	1,114,349	T→A	6.9%	N153I (AAT→ATT)	rlmF ←	ribosomal RNA large subunit methyltransferase F
RA	1,120,469	T→A	10.6%	intergenic (‑211/‑91)	pepA ← / → PP_0982	cytosol aminopeptidase/YjgP/YjgQ family permease
RA	1,120,470	T→A	10.6%	intergenic (‑212/‑90)	pepA ← / → PP_0982	cytosol aminopeptidase/YjgP/YjgQ family permease
RA	1,120,471	T→A	10.6%	intergenic (‑213/‑89)	pepA ← / → PP_0982	cytosol aminopeptidase/YjgP/YjgQ family permease
RA	1,120,934	T→C	5.4%	V125V (GTT→GTC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,123,837	T→C	6.0%	intergenic (‑37/+184)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,126,645:1	+C	100%	intergenic (‑99/+50)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,145,433	C→T	8.6%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,148,793	G→T	5.6%	T151K (ACG→AAG)	PP_1007 ←	transmembrane sensor
RA	1,148,796	A→C	6.0%	L150R (CTT→CGT)	PP_1007 ←	transmembrane sensor
RA	1,175,196	C→T	10.1%	L91F (CTC→TTC)	PP_1030 →	hypothetical protein
RA	1,178,710	C→T	10.3%	intergenic (+15/+79)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,711	A→G	10.3%	intergenic (+16/+78)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,718:1	+T	6.8%	intergenic (+23/+71)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,879	C→A	6.6%	V633V (GTG→GTT)	PP_1033 ←	sulfatase domain‑containing protein
RA	1,178,886	T→G	7.3%	Q631P (CAA→CCA)	PP_1033 ←	sulfatase domain‑containing protein
RA	1,178,888	G→A	8.0%	P630P (CCC→CCT)	PP_1033 ←	sulfatase domain‑containing protein
RA	1,184,813	C→T	7.5%	G6G (GGC→GGT)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,189,035	A→G	14.7%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,189,036	C→T	14.5%	intergenic (+26/+16)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,193,928	T→A	7.0%	L23M (TTG→ATG) ‡	uxpA →	lipoprotein UxpA
RA	1,193,929	T→A	7.0%	L23* (TTG→TAG) ‡	uxpA →	lipoprotein UxpA
RA	1,206,693	G→C	6.5%	L770V (CTG→GTG)	PP_1058 ←	hypothetical protein
RA	1,206,695	G→C	7.5%	P769R (CCG→CGG)	PP_1058 ←	hypothetical protein
RA	1,206,697	G→C	6.3%	H768Q (CAC→CAG)	PP_1058 ←	hypothetical protein
RA	1,212,521	C→T	100%	intergenic (‑55/+133)	PP_1060 ← / ← PP_1061	glutamate synthase large subunit/ATP‑dependent DNA helicase
RA	1,222,249	C→A	9.8%	G321C (GGC→TGC)	PP_1067 ←	sensor histidine kinase
RA	1,231,835	Δ1 bp	6.9%	coding (878/1545 nt)	glpD ←	aerobic glycerol‑3‑phosphate dehydrogenase
RA	1,231,841:1	+C	7.4%	coding (872/1545 nt)	glpD ←	aerobic glycerol‑3‑phosphate dehydrogenase
RA	1,239,103	A→C	9.4%	intergenic (‑78/‑297)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,962:1	+T	8.2%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,967	Δ1 bp	7.9%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,243,725	G→A	7.3%	intergenic (+14/+85)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,738	T→A	9.7%	intergenic (+27/+72)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,739	T→C	10.0%	intergenic (+28/+71)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,740	C→G	10.1%	intergenic (+29/+70)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,741	G→A	10.0%	intergenic (+30/+69)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,742	T→A	11.7%	intergenic (+31/+68)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,243,755	T→C	6.6%	intergenic (+44/+55)	tsaA → / ← rnt	peroxiredoxin/ribonuclease T
RA	1,256,881	A→T	10.3%	noncoding (434/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,882	G→T	10.3%	noncoding (433/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,883	A→C	10.3%	noncoding (432/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,884	A→T	10.3%	noncoding (431/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,265,163	G→T	8.2%	P86Q (CCG→CAG)	PP_1106 ←	hypothetical protein
RA	1,271,579	G→A	9.1%	G161S (GGC→AGC)	PP_1112 →	membrane protein
RA	1,275,087	G→C	16.0%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,294,114	C→T	8.2%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,327,121	C→T	48.9%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,342,251	C→T	17.9%	intergenic (‑35/+20)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,342,252	A→T	16.7%	intergenic (‑36/+19)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,342,253	A→G	16.7%	intergenic (‑37/+18)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,342,262	C→T	14.6%	intergenic (‑46/+9)	PP_1166 ← / ← PP_1167	DMT superfamily permease/TRAP dicarboxylate transporter subunit DctM
RA	1,354,153	A→T	7.5%	P408P (CCT→CCA)	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,356,405	G→C	8.5%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,363,005	G→A	6.8%	intergenic (+48/‑303)	phoQ → / → dctA‑I	sensor protein/C4‑dicarboxylate transport protein
RA	1,364,058	G→T	6.7%	V251L (GTG→TTG)	dctA‑I →	C4‑dicarboxylate transport protein
RA	1,364,065	A→C	6.5%	K253T (AAG→ACG)	dctA‑I →	C4‑dicarboxylate transport protein
RA	1,364,488	C→G	6.0%	A394G (GCC→GGC)	dctA‑I →	C4‑dicarboxylate transport protein
RA	1,364,658	A→T	11.3%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,659	A→T	11.3%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,660	A→T	11.3%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,736	T→A	5.9%	intergenic (+106/+43)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,366,548	T→G	6.0%	E51A (GAG→GCG)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,554	C→A	5.9%	R49L (CGC→CTC)	PP_1191 ←	S4 domain‑containing protein
RA	1,376,321	A→T	11.9%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,322	G→C	11.9%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,323	A→T	11.8%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,381,715	G→C	8.4%	D156H (GAC→CAC)	dinB →	DNA polymerase IV
RA	1,384,954	A→G	7.8%	M26T (ATG→ACG)	proS ←	proline‑‑tRNA ligase
RA	1,403,590	G→A	16.0%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,591	T→C	16.5%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,415,842	A→G	5.7%	D71G (GAT→GGT)	PP_1238 →	lipoprotein
RA	1,419,548:1	+C	100%	intergenic (‑37/+99)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,433,029	T→A	6.4%	intergenic (+17/+107)	xenA → / ← PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
RA	1,433,030	T→A	6.3%	intergenic (+18/+106)	xenA → / ← PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
RA	1,433,031	T→A	6.4%	intergenic (+19/+105)	xenA → / ← PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
RA	1,449,507	A→T	10.5%	L59M (TTG→ATG)	yhaV ←	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease
RA	1,449,511	C→G	8.6%	R57R (CGG→CGC)	yhaV ←	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease
RA	1,449,515	A→T	7.8%	I56N (ATC→AAC)	yhaV ←	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease
JC	1,450,884	Δ5 bp	5.2%	coding (68‑72/906 nt)	PP_1270 →	LysR family transcriptional regulator
RA	1,453,971	G→T	9.1%	S202I (AGC→ATC)	PP_1272 →	multidrug MFS transporter membrane fusion protein
RA	1,453,974	C→G	9.1%	A203G (GCC→GGC)	PP_1272 →	multidrug MFS transporter membrane fusion protein
RA	1,453,977	A→C	8.9%	D204A (GAT→GCT)	PP_1272 →	multidrug MFS transporter membrane fusion protein
RA	1,458,117	T→G	8.5%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,469,808	A→G	9.8%	V112A (GTG→GCG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,811	A→T	11.6%	L111Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,814	A→T	11.4%	L110Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,817	C→T	11.1%	R109H (CGC→CAC)	algK ←	alginate biosynthesis protein AlgK
RA	1,488,049	T→A	12.8%	N92Y (AAC→TAC)	degS ←	serine endoprotease DegS
RA	1,488,057	T→A	14.0%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,058	T→A	16.3%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,066	T→A	17.6%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,491,331	A→G	6.8%	T332A (ACC→GCC)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,499,480	2 bp→AC	100%	intergenic (+57/‑106)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,498	1 bp→CG	100%	intergenic (+75/‑89)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,506:1	+C	100%	intergenic (+83/‑81)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,501,576	G→A	7.1%	Q45* (CAG→TAG)	PP_1313 ←	AraC family transcriptional regulator
RA	1,506,923	A→G	7.7%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,927	G→A	7.9%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,930	T→C	7.9%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,934	C→T	7.3%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,518,231	A→C	7.8%	E474A (GAG→GCG) ‡	murE →	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase
RA	1,518,232	G→T	8.3%	E474D (GAG→GAT) ‡	murE →	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase
RA	1,522,609	A→T	5.7%	M173L (ATG→TTG)	ftsW →	lipid II flippase
RA	1,527,806	C→T	7.5%	G49G (GGC→GGT)	ftsA →	cell division protein FtsA
RA	1,555,388	A→C	9.5%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,389	T→A	13.9%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,390	G→T	12.4%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,575,198	G→A	7.3%	intergenic (‑184/+26)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,576,756	G→C	8.4%	intergenic (‑276/+37)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,757	A→T	8.5%	intergenic (‑277/+36)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,760	A→T	8.5%	intergenic (‑280/+33)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,761	G→C	8.4%	intergenic (‑281/+32)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,580,995	C→A	100%	K134N (AAG→AAT)	ttgB ←	efflux pump membrane protein TtgB
RA	1,582,773	C→A	7.8%	intergenic (‑219/‑39)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,591,965	G→C	5.8%	intergenic (‑72/‑131)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,982	C→A	13.9%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,987	T→G	12.5%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,607,941	A→G	10.8%	L210P (CTG→CCG)	rsuA ←	16S rRNA pseudouridine(516) synthase
RA	1,607,944	C→T	11.3%	R209Q (CGG→CAG)	rsuA ←	16S rRNA pseudouridine(516) synthase
RA	1,611,155	T→C	6.8%	Y308C (TAC→TGC)	PP_1412 ←	3‑hydroxyisobutyryl‑CoA hydrolase
RA	1,622,188	G→A	6.8%	E368K (GAG→AAG)	PP_1421 →	sensor histidine kinase TctE
RA	1,622,284	G→A	7.0%	E400K (GAA→AAA)	PP_1421 →	sensor histidine kinase TctE
RA	1,628,174	T→C	8.1%	V96A (GTC→GCC)	mucA →	sigma factor AlgU negative regulator
RA	1,628,993	T→G	8.0%	M168R (ATG→AGG) ‡	mucB →	sigma factor AlgU regulator MucB
RA	1,628,994	G→C	8.4%	M168I (ATG→ATC) ‡	mucB →	sigma factor AlgU regulator MucB
RA	1,628,995	C→A	8.5%	L169I (CTC→ATC)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,213	C→T	6.9%	N241N (AAC→AAT)	mucB →	sigma factor AlgU regulator MucB
RA	1,630,233	C→T	7.2%	P216S (CCC→TCC)	PP_1430 →	DegP‑like serine endoprotease
RA	1,637,325	A→T	10.9%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,326	A→T	10.9%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,336	G→A	9.1%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,342	A→G	8.9%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,344	C→T	8.9%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,021	A→G	6.1%	A130A (GCT→GCC)	czcR‑III ←	response regulator
RA	1,640,008	G→C	6.4%	L315V (CTG→GTG)	cmoB ←	tRNA 5‑methoxyuridine(34) synthase CmoB
RA	1,640,010	A→C	6.5%	L314R (CTG→CGG) ‡	cmoB ←	tRNA 5‑methoxyuridine(34) synthase CmoB
RA	1,640,011	G→T	6.9%	L314M (CTG→ATG) ‡	cmoB ←	tRNA 5‑methoxyuridine(34) synthase CmoB
RA	1,640,013	G→C	6.7%	T313S (ACC→AGC)	cmoB ←	tRNA 5‑methoxyuridine(34) synthase CmoB
RA	1,642,271	G→C	9.1%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,277	G→C	6.8%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,278	C→G	6.8%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,279	G→C	6.6%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,285	G→C	7.7%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,669,284	C→T	5.8%	T131T (ACC→ACT)	rimM →	ribosome maturation factor RimM
RA	1,675,431	G→A	8.7%	A200T (GCT→ACT)	hom →	homoserine dehydrogenase
RA	1,676,160	C→G	8.5%	intergenic (+22/‑38)	hom → / → thrC	homoserine dehydrogenase/threonine synthase
RA	1,676,163	C→G	8.9%	intergenic (+25/‑35)	hom → / → thrC	homoserine dehydrogenase/threonine synthase
RA	1,691,773	C→G	5.8%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,783	C→A	9.7%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,786	T→G	11.6%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,796	C→G	8.7%	intergenic (+63/‑108)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,797	G→A	8.7%	intergenic (+64/‑107)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,703,248	A→G	12.9%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,250	G→C	16.5%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,252	C→T	15.0%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,707,227	G→C	18.2%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,230	G→C	17.9%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,080	A→T	19.8%	intergenic (+71/‑187)	ppc → / → adk	phosphoenolpyruvate carboxylase/adenylate kinase
RA	1,728,860	A→T	8.8%	F83I (TTT→ATT)	PP_1523 ←	hypothetical protein
RA	1,741,935	C→G	14.0%	intergenic (‑23/+61)	PP_1538 ← / ← PP_1539	hypothetical protein/hypothetical protein
RA	1,750,409	A→C	6.0%	Q29P (CAA→CCA)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,750,412	G→T	6.0%	W30L (TGG→TTG)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,751,425	C→G	8.5%	H262D (CAT→GAT)	PP_1551 →	replication protein O
RA	1,751,428	C→G	8.5%	H263D (CAC→GAC)	PP_1551 →	replication protein O
RA	1,753,353	G→A	6.6%	R108H (CGC→CAC)	PP_1555 →	putative Phage integrase
JC	1,780,067	Δ62 bp	30.8%	intergenic (+26/+19)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,944	A→G	8.0%	T259A (ACC→GCC)	tsf →	elongation factor Ts
RA	1,786,952	C→T	6.1%	F261F (TTC→TTT)	tsf →	elongation factor Ts
RA	1,786,953	A→G	6.4%	K262E (AAA→GAA)	tsf →	elongation factor Ts
RA	1,804,450	C→T	100%	P268L (CCG→CTG)	accA →	acetyl‑CoA carboxylase carboxyltransferase subunit alpha
RA	1,808,075	G→A	9.2%	V42V (GTG→GTA)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,808,080	T→A	8.3%	V44D (GTT→GAT)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,810,336	C→A	9.1%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,812,302	G→C	6.9%	A39G (GCC→GGC) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,812,303	C→A	6.9%	A39S (GCC→TCC) ‡	PP_1615 ←	LysR family transcriptional regulator
RA	1,812,308	T→G	7.0%	Q37P (CAG→CCG)	PP_1615 ←	LysR family transcriptional regulator
RA	1,813,853	C→A	5.7%	R70S (CGT→AGT) ‡	frmC →	S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase
RA	1,813,854	G→C	5.7%	R70P (CGT→CCT) ‡	frmC →	S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase
RA	1,813,855	T→G	5.7%	R70R (CGT→CGG) ‡	frmC →	S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase
RA	1,819,789	Δ1 bp	8.8%	intergenic (+26/‑449)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,795:1	+A	9.6%	intergenic (+32/‑443)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,796	T→C	9.6%	intergenic (+33/‑442)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,825,091	G→C	10.9%	R55G (CGC→GGC)	mutS ←	DNA mismatch repair protein MutS
RA	1,825,092	G→C	10.5%	A54A (GCC→GCG)	mutS ←	DNA mismatch repair protein MutS
RA	1,854,733	T→A	8.2%	intergenic (+55/‑256)	PP_1658 → / → PP_1659	hypothetical protein/hypothetical protein
RA	1,854,734	C→G	7.9%	intergenic (+56/‑255)	PP_1658 → / → PP_1659	hypothetical protein/hypothetical protein
RA	1,886,588	A→G	7.1%	I419V (ATC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,595	A→T	7.0%	D421V (GAC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,602	C→T	7.0%	D423D (GAC→GAT)	rmuC →	DNA recombination limiting inversions protein
RA	1,892,526	C→G	13.6%	intergenic (+36/‑59)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,527	T→C	14.0%	intergenic (+37/‑58)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,528	G→A	13.7%	intergenic (+38/‑57)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,529	C→G	14.0%	intergenic (+39/‑56)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,895,977	A→C	6.4%	D404A (GAC→GCC)	PP_1700 →	acyltransferase
RA	1,897,203	G→T	8.9%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,207	T→A	9.0%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,211	A→C	7.8%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,898,646	C→T	9.1%	intergenic (+52/‑119)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,647	T→C	9.3%	intergenic (+53/‑118)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,650	G→A	9.8%	intergenic (+56/‑115)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,651	A→G	9.8%	intergenic (+57/‑114)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,898,660	T→C	10.0%	intergenic (+66/‑105)	PP_t16 → / → PP_t17	tRNA‑Asp/tRNA‑Val
RA	1,905,092	C→G	6.9%	D449E (GAC→GAG)	nirB →	nitrite reductase large subunit
RA	1,905,093	C→G	6.9%	L450V (CTC→GTC)	nirB →	nitrite reductase large subunit
RA	1,915,598:1	+A	5.8%	intergenic (+26/‑263)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,602	T→A	5.8%	intergenic (+30/‑259)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,605	Δ1 bp	5.8%	intergenic (+33/‑256)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,916,384	T→G	6.2%	intergenic (+86/‑29)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,916,385	G→C	6.1%	intergenic (+87/‑28)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,921,549	T→A	20.5%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,550	T→A	18.0%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,932,573	T→A	7.7%	intergenic (‑40/+110)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,932,574	T→A	7.7%	intergenic (‑41/+109)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,932,638:1	+C	100%	intergenic (‑105/+45)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,974,790	G→A	7.7%	R267H (CGC→CAC)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,975,879	A→G	9.1%	M271V (ATG→GTG) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,881	G→T	11.0%	M271I (ATG→ATT) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,883	T→C	9.1%	I272T (ATC→ACC)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,886	G→A	9.4%	G273D (GGT→GAT)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,888	A→C	9.1%	N274H (AAC→CAC) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,890	C→T	9.4%	N274N (AAC→AAT) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,997,963	A→C	6.8%	I140M (ATT→ATG)	rfbD ←	dTDP‑4‑dehydrorhamnose reductase
RA	1,997,967	G→C	7.1%	A139G (GCC→GGC)	rfbD ←	dTDP‑4‑dehydrorhamnose reductase
RA	1,997,971	G→T	6.9%	H138N (CAT→AAT)	rfbD ←	dTDP‑4‑dehydrorhamnose reductase
RA	2,006,164	G→T	10.0%	A169E (GCG→GAG)	PP_1789 ←	haloacid dehalogenase‑like family hydrolase
RA	2,085,456	G→C	9.2%	intergenic (+165/‑430)	PP_1864 → / → PP_1865	hypothetical protein/transposase
RA	2,087,361	C→G	7.7%	intergenic (+174/+744)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,092,427	T→A	7.5%	intergenic (+73/+18)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,102,711	C→T	6.5%	noncoding (72/76 nt)	PP_t20 →	tRNA‑Glu
RA	2,104,742	T→C	8.1%	N48D (AAC→GAC)	PP_1879 ←	hypothetical protein
RA	2,122,129	C→T	7.4%	R319R (CGC→CGT)	PP_1886 →	hypothetical protein
RA	2,122,130	A→G	7.7%	T320A (ACG→GCG)	PP_1886 →	hypothetical protein
RA	2,140,775	G→A	6.8%	V171I (GTC→ATC) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,140,776	T→C	6.5%	V171A (GTC→GCC) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,163,145	G→A	7.3%	Q2Q (CAG→CAA)	PP_5482 →	hypothetical protein
RA	2,173,832	C→A	9.6%	A65A (GCG→GCT) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,173,833	G→T	9.6%	A65E (GCG→GAG) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,173,836	A→C	9.5%	I64S (ATC→AGC) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,173,837	T→G	9.6%	I64L (ATC→CTC) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,178,239	C→T	6.2%	Q159* (CAG→TAG) ‡	PP_1931 →	hypothetical protein
RA	2,178,240	A→T	5.9%	Q159L (CAG→CTG) ‡	PP_1931 →	hypothetical protein
RA	2,178,245	A→T	5.6%	K161* (AAG→TAG) ‡	PP_1931 →	hypothetical protein
RA	2,178,246	A→G	5.9%	K161R (AAG→AGG) ‡	PP_1931 →	hypothetical protein
RA	2,191,853	A→G	11.8%	Q907R (CAG→CGG)	PP_1937 →	helicase
RA	2,191,856	C→T	11.8%	P908L (CCG→CTG)	PP_1937 →	helicase
RA	2,199,963:1	+C	11.0%	coding (829/1278 nt)	PP_1944 →	aminomethyltransferase
RA	2,237,467	G→A	9.7%	Q373* (CAG→TAG)	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,246,241	C→T	7.8%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,246,242	A→G	8.3%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,258,258	C→T	7.8%	intergenic (+313/‑79)	PP_1990 → / → asd	transposase/aspartate‑semialdehyde dehydrogenase
RA	2,259,589	G→A	12.3%	P59P (CCG→CCA)	fimV →	motility protein FimV
RA	2,259,590	A→G	12.3%	S60G (AGC→GGC)	fimV →	motility protein FimV
RA	2,259,593	C→T	12.1%	L61L (CTG→TTG) ‡	fimV →	motility protein FimV
RA	2,259,594	T→C	12.3%	L61P (CTG→CCG) ‡	fimV →	motility protein FimV
RA	2,263,994	G→T	6.8%	intergenic (+166/‑57)	trpF → / → accD	N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta
RA	2,271,666	C→T	20.4%	intergenic (+50/‑50)	PP_t32 → / → PP_t33	tRNA‑Asp/tRNA‑Asp
RA	2,271,667	A→G	20.4%	intergenic (+51/‑49)	PP_t32 → / → PP_t33	tRNA‑Asp/tRNA‑Asp
RA	2,273,062	C→G	10.6%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,066	A→T	10.7%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,070	C→G	10.1%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,080	C→T	12.8%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,277,495	G→T	8.2%	A362D (GCT→GAT)	PP_2007 ←	P‑47‑like protein
RA	2,277,498	G→T	8.2%	A361D (GCC→GAC)	PP_2007 ←	P‑47‑like protein
RA	2,277,501	A→C	8.3%	V360G (GTC→GGC)	PP_2007 ←	P‑47‑like protein
RA	2,277,504	A→C	8.3%	I359S (ATC→AGC)	PP_2007 ←	P‑47‑like protein
JC	2,282,749	Δ66 bp	8.1%	intergenic (‑141/+23)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,297,843	G→A	11.7%	A760V (GCC→GTC)	sbcC ←	exonuclease subunit SbcC
RA	2,299,400	T→A	8.2%	E241V (GAG→GTG) ‡	sbcC ←	exonuclease subunit SbcC
RA	2,299,401	C→G	8.3%	E241Q (GAG→CAG) ‡	sbcC ←	exonuclease subunit SbcC
RA	2,302,857	C→T	8.9%	noncoding (59/93 nt)	PP_mr30 ←	C4 ncRNA
RA	2,312,842	C→G	10.0%	R5T (AGG→ACG) ‡	PP_2034 ←	membrane protein
RA	2,312,843	T→G	12.1%	R5R (AGG→CGG) ‡	PP_2034 ←	membrane protein
RA	2,338,785	A→G	13.1%	D193G (GAC→GGC)	PP_2055 →	isomerase
RA	2,338,796	C→T	13.1%	P197S (CCG→TCG)	PP_2055 →	isomerase
RA	2,339,540	G→A	15.4%	G61D (GGC→GAC)	dctA‑II →	C4‑dicarboxylate transport protein
RA	2,367,411	G→T	9.0%	V77L (GTG→TTG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,284	A→C	7.1%	K368Q (AAG→CAG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,287	G→T	7.4%	E369* (GAA→TAA) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,288	A→T	7.4%	E369V (GAA→GTA) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,289	A→C	7.4%	E369D (GAA→GAC) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,292	G→T	7.6%	L370L (CTG→CTT)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,372,753	G→T	8.0%	R76S (CGC→AGC)	PP_2081 ←	phosphoenolpyruvate synthase regulatory protein
RA	2,392,617	C→G	5.8%	I382M (ATC→ATG)	PP_2097 →	sensory box protein
RA	2,433,150	A→C	5.6%	Q341P (CAG→CCG)	uup →	ABC transporter ATP‑binding protein
RA	2,433,153	G→T	5.7%	R342L (CGG→CTG)	uup →	ABC transporter ATP‑binding protein
RA	2,438,880	G→A	6.8%	P600P (CCG→CCA)	fadB →	enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
RA	2,445,358	G→C	8.5%	R52G (CGC→GGC)	lexA‑I ←	transcriptional repressor
RA	2,445,359	G→C	8.5%	A51A (GCC→GCG)	lexA‑I ←	transcriptional repressor
RA	2,456,052	T→C	9.1%	L256P (CTG→CCG)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,055	C→G	8.5%	A257G (GCC→GGC)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,057	T→A	8.1%	C258S (TGC→AGC) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,059	C→G	10.0%	C258W (TGC→TGG) ‡	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,456,062	G→A	8.5%	P259P (CCG→CCA)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,458,065	G→C	12.3%	intergenic (+137/‑68)	PP_2150 → / → sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
RA	2,458,070	C→G	11.8%	intergenic (+142/‑63)	PP_2150 → / → sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
RA	2,468,261	G→C	12.1%	intergenic (‑25/+98)	PP_2161 ← / ← PP_2162	hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,474,722	A→C	7.8%	C160W (TGT→TGG)	tal ←	transaldolase
RA	2,474,725	A→G	7.7%	A159A (GCT→GCC)	tal ←	transaldolase
RA	2,478,840	G→A	9.8%	intergenic (+93/+352)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,841	C→A	9.8%	intergenic (+94/+351)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,845	G→C	9.8%	intergenic (+98/+347)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,487,011	A→G	6.5%	K21E (AAG→GAG)	PP_2181 →	Cro/CI family transcriptional regulator
RA	2,488,043	C→T	8.9%	R139W (CGG→TGG) ‡	PP_2182 →	hypothetical protein
RA	2,488,044	G→T	8.9%	R139L (CGG→CTG) ‡	PP_2182 →	hypothetical protein
RA	2,488,047	A→C	10.2%	Q140P (CAA→CCA) ‡	PP_2182 →	hypothetical protein
RA	2,488,048	A→G	8.9%	Q140Q (CAA→CAG) ‡	PP_2182 →	hypothetical protein
RA	2,500,570	G→A	12.5%	intergenic (+17/+8)	PP_2193 → / ← PP_2194	ferric siderophore receptor/LysR family transcriptional regulator
RA	2,508,789	A→T	14.1%	M109K (ATG→AAG) ‡	PP_2203 ←	hypothetical protein
RA	2,508,790	T→C	12.2%	M109V (ATG→GTG) ‡	PP_2203 ←	hypothetical protein
RA	2,548,181	G→A	14.3%	S7S (AGC→AGT)	rhtA ←	threonine/homoserine exporter
RA	2,556,805	A→G	8.5%	L169S (TTG→TCG)	PP_2241 ←	MFS transporter
RA	2,566,154	A→T	6.9%	P266P (CCT→CCA)	pctB ←	methyl‑accepting chemotaxis protein PctB
RA	2,567,944	T→A	9.5%	intergenic (‑17/‑86)	PP_2250 ← / → PP_2251	LysR family transcriptional regulator/membrane protein
RA	2,567,946	G→C	9.9%	intergenic (‑19/‑84)	PP_2250 ← / → PP_2251	LysR family transcriptional regulator/membrane protein
RA	2,567,948	T→A	9.9%	intergenic (‑21/‑82)	PP_2250 ← / → PP_2251	LysR family transcriptional regulator/membrane protein
RA	2,573,556	A→G	7.4%	E104E (GAA→GAG)	PP_2257 →	aerotaxis receptor
RA	2,573,558	G→A	7.2%	G105D (GGT→GAT)	PP_2257 →	aerotaxis receptor
RA	2,592,156	A→T	7.9%	A117A (GCA→GCT)	PP_2270 →	DNA primase/helicase
RA	2,601,075	G→A	11.9%	A184A (GCG→GCA)	PP_2279 →	head‑to‑tail joining protein
RA	2,624,601	G→A	7.8%	G65R (GGG→AGG)	PP_2296 →	hypothetical protein
RA	2,630,168	A→G	5.2%	A375A (GCA→GCG)	clpX →	ATP‑dependent Clp protease ATP‑binding subunit ClpX
RA	2,633,457	T→G	6.9%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,458	C→A	6.9%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,636,659	A→C	7.3%	intergenic (‑86/‑86)	PP_2305 ← / → PP_2306	hypothetical protein/hypothetical protein
RA	2,650,160	A→T	9.6%	intergenic (+99/+35)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,161	A→T	9.6%	intergenic (+100/+34)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,651,276	G→C	9.1%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,653,084	G→A	7.6%	G157G (GGG→GGA)	PP_2325 →	2‑dehydropantoate 2‑reductase
RA	2,657,803	A→C	12.6%	intergenic (‑192/+17)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,657,804	A→T	12.6%	intergenic (‑193/+16)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,657,805	G→T	12.7%	intergenic (‑194/+15)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,664,501	C→A	6.0%	L122M (CTG→ATG) ‡	acnA‑II →	aconitate hydratase
RA	2,664,502	T→C	6.0%	L122P (CTG→CCG) ‡	acnA‑II →	aconitate hydratase
RA	2,664,508	T→G	6.0%	V124G (GTC→GGC)	acnA‑II →	aconitate hydratase
RA	2,668,038	Δ1 bp	9.5%	intergenic (+56/‑111)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,669,671	T→G	8.5%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,674	C→A	8.3%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,683,744	A→G	9.3%	L274P (CTG→CCG)	PP_2352 ←	hypothetical protein
RA	2,726,241	T→C	7.7%	S139G (AGT→GGT)	PP_2387 ←	hypothetical protein
RA	2,763,787	T→C	12.0%	N42D (AAC→GAC)	PP_2417 ←	iron ABC transporter permease
RA	2,763,790	C→T	12.7%	A41T (GCC→ACC)	PP_2417 ←	iron ABC transporter permease
RA	2,763,794	C→G	12.8%	V39V (GTG→GTC) ‡	PP_2417 ←	iron ABC transporter permease
RA	2,763,795	A→T	12.8%	V39E (GTG→GAG) ‡	PP_2417 ←	iron ABC transporter permease
RA	2,763,796	C→G	13.0%	V39L (GTG→CTG) ‡	PP_2417 ←	iron ABC transporter permease
RA	2,763,800	A→G	13.3%	G37G (GGT→GGC)	PP_2417 ←	iron ABC transporter permease
RA	2,763,803	G→A	13.3%	V36V (GTC→GTT)	PP_2417 ←	iron ABC transporter permease
RA	2,787,623	G→A	11.6%	intergenic (+70/‑55)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,787,629	C→G	11.9%	intergenic (+76/‑49)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,787,630	C→G	11.9%	intergenic (+77/‑48)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,787,636	T→C	11.2%	intergenic (+83/‑42)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,799,171	A→G	9.7%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,802,588	C→T	8.7%	G324G (GGC→GGT)	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,810,387	G→A	8.1%	W265* (TGG→TAG)	thrS →	threonine‑‑tRNA ligase
RA	2,829,972	T→G	9.3%	H192Q (CAT→CAG)	PP_2482 →	molybdenum cofactor biosynthesis protein A
RA	2,829,973	C→A	9.1%	L193M (CTG→ATG)	PP_2482 →	molybdenum cofactor biosynthesis protein A
RA	2,831,283	T→C	7.2%	Y83C (TAC→TGC)	PP_2484 ←	ArsR family transcriptional regulator
RA	2,839,676	A→T	7.9%	A73A (GCT→GCA)	PP_5529 ←	epimerase
RA	2,839,682	G→C	6.8%	S71R (AGC→AGG) ‡	PP_5529 ←	epimerase
RA	2,839,684	T→C	6.9%	S71G (AGC→GGC) ‡	PP_5529 ←	epimerase
RA	2,839,688	A→T	7.1%	Y69* (TAT→TAA)	PP_5529 ←	epimerase
RA	2,844,675	T→C	10.4%	intergenic (‑35/+45)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,678	A→T	10.4%	intergenic (‑38/+42)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,679	A→T	10.4%	intergenic (‑39/+41)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,682	A→T	10.2%	intergenic (‑42/+38)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,683	A→T	10.2%	intergenic (‑43/+37)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,844,686	G→A	10.2%	intergenic (‑46/+34)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein
RA	2,852,397	T→A	15.7%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,881,737	C→A	10.6%	R92L (CGG→CTG)	PP_2536 ←	glutathione S‑transferase family protein
RA	2,887,552	G→A	19.0%	L373L (CTG→TTG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,555	G→A	20.0%	R372C (CGC→TGC)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,557	T→C	22.2%	K371R (AAG→AGG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,559	G→C	22.4%	L370L (CTC→CTG) ‡	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,561	G→A	22.2%	L370F (CTC→TTC) ‡	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,563	T→C	23.7%	H369R (CAC→CGC)	PP_2542 ←	GntR family transcriptional regulator
RA	2,887,566	T→C	22.2%	K368R (AAG→AGG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,907,691	T→A	10.7%	Q335L (CAG→CTG)	hasE ←	secretion metalloprotease
RA	2,921,460	G→A	100%	G3494R (GGG→AGG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,950,489	C→T	9.3%	D245N (GAC→AAC)	oguA ←	8‑oxoguanine deaminase
RA	2,964,530	C→T	8.3%	A114T (GCC→ACC)	fatD ←	ferric anguibactin transport system permease FatD
RA	2,970,885	C→T	10.5%	I408I (ATC→ATT)	PP_2599 →	chemotaxis sensory transducer family protein
RA	2,977,238	A→G	8.0%	Y373H (TAC→CAC)	PP_2604 ←	major facilitator family transporter
RA	3,020,294	G→A	12.5%	A278T (GCA→ACA)	PP_2638 →	cellulose synthase operon protein C
RA	3,048,590	A→G	11.3%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,604	G→T	16.6%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,605	A→C	16.3%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,619	C→T	10.6%	intergenic (+74/‑222)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,624	G→A	8.7%	intergenic (+79/‑217)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,139,185	C→T	10.8%	Q442* (CAG→TAG)	PP_2754 →	OprD family outer membrane porin
RA	3,159,357	Δ1 bp	9.5%	coding (1376/2097 nt)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,164,142	T→C	9.1%	V311A (GTG→GCG)	PP_2778 →	3‑oxoacyl‑ACP synthase
RA	3,173,788	G→C	9.7%	intergenic (+9/‑42)	PP_2785 → / → PP_2786	hypothetical protein/hypothetical protein
RA	3,173,790	G→C	9.4%	intergenic (+11/‑40)	PP_2785 → / → PP_2786	hypothetical protein/hypothetical protein
RA	3,174,739	G→A	10.8%	A14T (GCA→ACA)	PP_2787 →	transporter
RA	3,190,795	G→A	10.2%	Q402* (CAG→TAG)	PP_2800 ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	3,209,062	G→C	10.0%	A96P (GCG→CCG)	PP_2813 →	BNR domain‑containing protein
RA	3,210,906	G→A	11.7%	intergenic (‑181/‑58)	PP_2814 ← / → PP_2815	hypothetical protein/hypothetical protein
RA	3,213,301	G→A	9.3%	R123Q (CGG→CAG)	mexC →	multidrug RND transporter membrane fusion protein MexC
RA	3,247,880	G→A	11.4%	G46S (GGC→AGC)	ureA →	urease subunit gamma
RA	3,271,146	G→C	14.6%	R313R (CGC→CGG) ‡	PP_2869 ←	FMN‑binding oxidoreductase
RA	3,271,148	G→C	15.0%	R313G (CGC→GGC) ‡	PP_2869 ←	FMN‑binding oxidoreductase
RA	3,312,687	G→T	15.2%	intergenic (+28/‑134)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,688	T→A	15.2%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,689	T→A	15.1%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,690	A→C	15.3%	intergenic (+31/‑131)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,315,648	C→A	7.8%	E171* (GAG→TAG)	PP_2915 ←	membrane protein
RA	3,315,681	A→G	7.0%	F160L (TTC→CTC)	PP_2915 ←	membrane protein
RA	3,325,026	G→T	13.3%	P36P (CCC→CCA)	PP_2924 ←	hypothetical protein
RA	3,328,023	G→A	7.8%	C61C (TGC→TGT)	udg ←	UDP‑glucose 6‑dehydrogenase
RA	3,333,428	C→T	7.0%	P126P (CCG→CCA)	PP_2931 ←	hypothetical protein
RA	3,354,024	A→G	13.3%	H90R (CAC→CGC)	PP_2949 →	permease
RA	3,369,021	A→G	9.7%	N776S (AAT→AGT) ‡	PP_2964 →	transposase
RA	3,369,022	T→A	9.3%	N776K (AAT→AAA) ‡	PP_2964 →	transposase
RA	3,369,023	C→T	8.7%	L777L (CTG→TTG)	PP_2964 →	transposase
RA	3,379,304	A→T	7.8%	V282E (GTA→GAA)	tnpS ←	cointegrate resolution protein S
RA	3,398,903	C→G	15.1%	intergenic (+123/‑119)	aroQ‑III → / → PP_3004	type II 3‑dehydroquinate dehydratase/hypothetical protein
RA	3,402,497	T→A	6.6%	intergenic (+21/‑131)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,505	C→T	9.6%	intergenic (+29/‑123)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,506	G→C	9.1%	intergenic (+30/‑122)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,511	G→C	9.1%	intergenic (+35/‑117)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,512	A→G	9.4%	intergenic (+36/‑116)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,523	T→G	7.5%	intergenic (+47/‑105)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,406,173	G→A	7.4%	G43G (GGC→GGT)	PP_3018 ←	hypothetical protein
RA	3,408,058	G→A	15.6%	V162V (GTC→GTT)	PP_3021 ←	LysE family transporter
RA	3,417,742	G→A	8.5%	A100V (GCA→GTA)	PP_3030 ←	hypothetical protein
RA	3,440,620	G→T	8.3%	K121N (AAG→AAT)	PP_3060 →	tail sheath protein
RA	3,441,436	G→C	7.7%	A65A (GCG→GCC)	PP_3062 →	tail length determination protein
RA	3,441,440	G→C	7.3%	G67R (GGC→CGC)	PP_3062 →	tail length determination protein
RA	3,457,059	T→G	8.2%	E77A (GAG→GCG)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,457,062	C→A	7.5%	R76L (CGC→CTC)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,466,841	T→G	33.2%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,477,547	G→A	6.6%	A140V (GCC→GTC)	PP_3088 ←	hypothetical protein
RA	3,477,550	A→T	6.8%	I139N (ATT→AAT)	PP_3088 ←	hypothetical protein
RA	3,490,029	G→A	8.3%	I454I (ATC→ATT)	clpV ←	protein ClpV1
RA	3,498,031	G→T	7.2%	intergenic (‑435/+271)	PP_5562 ← / ← PP_5563	hypothetical protein/membrane protein
RA	3,511,113	C→T	7.4%	G103G (GGC→GGT)	PP_3107 →	hypothetical protein
RA	3,521,034	G→A	8.9%	intergenic (+306/‑454)	PP_5582 → / → PP_5583	hypothetical protein/hypothetical protein
RA	3,522,676	G→A	11.2%	intergenic (+463/‑234)	PP_5584 → / → PP_3113	hypothetical protein/transposase
RA	3,542,318	A→G	15.5%	Y135Y (TAT→TAC)	galE ←	UDP‑glucose 4‑epimerase
RA	3,542,321	C→T	15.5%	P134P (CCG→CCA)	galE ←	UDP‑glucose 4‑epimerase
RA	3,549,041	G→A	12.4%	V125I (GTC→ATC)	PP_3133 →	oxidoreductase
RA	3,553,637	C→T	8.5%	R102C (CGC→TGC)	PP_3138 →	VirK domain‑containing protein
RA	3,567,683	G→T	8.3%	A80A (GCG→GCT)	PP_3150 →	hypothetical protein
RA	3,567,685	A→C	8.1%	Q81P (CAG→CCG) ‡	PP_3150 →	hypothetical protein
RA	3,567,686	G→T	8.2%	Q81H (CAG→CAT) ‡	PP_3150 →	hypothetical protein
RA	3,567,688	A→C	8.1%	E82A (GAG→GCG)	PP_3150 →	hypothetical protein
RA	3,587,358	T→C	8.1%	L65P (CTG→CCG)	catA‑II →	catechol 1,2‑dioxygenase
RA	3,588,185	A→G	10.2%	E11G (GAG→GGG)	benE‑II →	benzoate transport protein
RA	3,590,016	G→T	6.1%	L179L (CTG→CTT)	nicP‑I →	porin‑like protein
RA	3,590,020	A→T	6.1%	N181Y (AAC→TAC)	nicP‑I →	porin‑like protein
RA	3,590,024	A→C	6.2%	E182A (GAA→GCA)	nicP‑I →	porin‑like protein
RA	3,603,016	C→T	8.9%	A141V (GCC→GTC)	garK →	glycerate kinase
RA	3,614,521	G→T	7.4%	A132S (GCG→TCG)	pet →	protein Pet18
RA	3,641,239	T→G	7.7%	D180A (GAC→GCC)	PP_3208 ←	Pdr/VanB family oxidoreductase
RA	3,641,242	C→T	7.7%	W179* (TGG→TAG) ‡	PP_3208 ←	Pdr/VanB family oxidoreductase
RA	3,641,243	A→G	7.7%	W179R (TGG→CGG) ‡	PP_3208 ←	Pdr/VanB family oxidoreductase
RA	3,641,246	C→A	7.5%	A178S (GCC→TCC)	PP_3208 ←	Pdr/VanB family oxidoreductase
RA	3,656,406	C→G	10.8%	E298Q (GAG→CAG)	PP_3221 ←	ABC transporter permease
RA	3,656,407:1	+C	10.3%	coding (891/909 nt)	PP_3221 ←	ABC transporter permease
RA	3,659,906	C→G	13.0%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,908	G→A	13.6%	intergenic (‑43/+32)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,909	T→C	12.9%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,911	C→G	12.5%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,687,526	C→T	11.1%	S200S (AGC→AGT)	PP_3252 →	HemK family modification methylase
RA	3,692,733	G→C	8.9%	A298G (GCC→GGC)	PP_3259 ←	acyl‑CoA dehydrogenase‑related protein
RA	3,692,740	C→G	9.1%	G296R (GGA→CGA)	PP_3259 ←	acyl‑CoA dehydrogenase‑related protein
RA	3,692,747	G→C	9.3%	S293R (AGC→AGG)	PP_3259 ←	acyl‑CoA dehydrogenase‑related protein
RA	3,695,944	A→T	7.7%	L75Q (CTG→CAG)	ligD ←	DNA ligase D
RA	3,697,067	T→C	7.4%	intergenic (+87/+5)	PP_3262 → / ← PP_5595	metallothionein/hypothetical protein
RA	3,697,084	C→G	10.3%	W135C (TGG→TGC)	PP_5595 ←	hypothetical protein
RA	3,714,216	C→G	7.0%	G100R (GGC→CGC)	paaK ←	phenylacetate‑CoA ligase
RA	3,723,683	G→T	5.6%	intergenic (+13/+17)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,686	A→C	5.6%	intergenic (+16/+14)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
MC JC	3,731,403	Δ61,130 bp	100%		[PP_3298]–[PP_3354]	56 genes [PP_3298], PP_3299, PP_3300, PP_3301, PP_3302, PP_3303, PP_3304, PP_3305, PP_3306, PP_3307, paoA, paoB, paoC, kefB‑II, PP_3312, PP_3313, PP_3314, PP_3315, PP_3316, PP_3317, PP_3318, PP_3319, PP_3320, PP_3321, hemBB, PP_3323, folEB, PP_3325, PP_3326, PP_3328, PP_5599, PP_3329, PP_5600, PP_3330, PP_3331, PP_3332, PP_3333, PP_5743, PP_3335, PP_3336, PP_3337, PP_3338, PP_3339, PP_3340, nikR, nikA, nikB, nikC, nikD, nikE, PP_3348, mhpT, PP_3350, atsA, PP_3353, [PP_3354]
RA	3,793,892	A→T	15.9%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,897	A→T	18.8%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,831,777	A→G	8.1%	F116S (TTC→TCC)	PP_3384 ←	gluconate 2‑dehydrogenase gamma subunit
RA	3,844,933	A→T	7.8%	L234Q (CTG→CAG)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,845,703:1	+G	100%	intergenic (‑70/+28)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,863,839	C→T	7.2%	P921L (CCA→CTA)	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,869,858	T→G	6.8%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,869,859	C→A	6.8%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,887,144	C→T	7.8%	R238H (CGC→CAC)	PP_3430 ←	two‑component system sensor histidine kinase/response regulator
RA	3,902,230	G→A	8.0%	R135H (CGT→CAT)	PP_3445 →	hypothetical protein
RA	3,911,962	G→C	8.3%	R103P (CGC→CCC)	PP_3452 →	GGDEF domain‑containing protein
RA	3,911,964	C→A	8.9%	L104M (CTG→ATG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,911,965	T→G	8.9%	L104R (CTG→CGG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,919,380	T→C	10.2%	intergenic (+33/‑29)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,381	C→G	10.3%	intergenic (+34/‑28)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,386	A→G	9.7%	intergenic (+39/‑23)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,388	G→C	9.7%	intergenic (+41/‑21)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,390	C→T	9.5%	intergenic (+43/‑19)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,395	C→G	12.1%	intergenic (+48/‑14)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,919,396	G→A	9.1%	intergenic (+49/‑13)	mexB → / → mobA	multidrug resistance protein MexB/molybdenum cofactor guanylyltransferase
RA	3,925,609	A→G	8.3%	D294D (GAT→GAC) ‡	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,925,610	T→A	8.4%	D294V (GAT→GTT) ‡	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,925,611	C→T	8.5%	D294N (GAT→AAT) ‡	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,951,159	T→C	100%	intergenic (‑123/+72)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,161	A→T	100%	intergenic (‑125/+70)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,962,576	Δ1 bp	7.5%	coding (774/1152 nt)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,962,582:1	+T	7.8%	coding (780/1152 nt)	PP_3492 →	acyl‑CoA dehydrogenase
RA	3,981,977	A→T	13.3%	noncoding (28/207 nt)	PP_mr43 ←	Cobalamin regulatory region
RA	3,988,412	C→A	8.6%	T310T (ACC→ACA)	oplA →	5‑oxoprolinase A
RA	3,998,666	C→T	9.5%	E127K (GAA→AAA)	PP_3527 ←	TetR family transcriptional regulator
RA	4,006,162	G→A	6.3%	Q572* (CAG→TAG)	PP_3535 ←	gamma‑glutamyltransferase
RA	4,013,692	C→G	7.3%	A142P (GCC→CCC)	PP_3541 ←	MgtC family transporter
RA	4,014,552	A→T	8.1%	intergenic (+29/‑93)	PP_3542 → / → PP_3543	hypothetical protein/iron‑sulfur cluster‑binding protein
RA	4,022,780	C→G	7.9%	intergenic (‑475/+193)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,049,176	A→T	7.0%	D576V (GAC→GTC)	quiA →	quinate dehydrogenase
RA	4,049,180	C→G	7.1%	F577L (TTC→TTG)	quiA →	quinate dehydrogenase
RA	4,049,184	A→T	7.5%	K579* (AAG→TAG) ‡	quiA →	quinate dehydrogenase
RA	4,049,185	A→C	7.5%	K579T (AAG→ACG) ‡	quiA →	quinate dehydrogenase
RA	4,049,907	A→G	23.2%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,910	C→G	26.2%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,913	C→T	26.2%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,057,524	G→A	7.8%	S46S (AGC→AGT)	PP_3575 ←	ferric siderophore receptor
RA	4,071,349	C→T	8.3%	R270R (CGG→CGA)	mdtB ←	multidrug transporter membrane protein
RA	4,119,481	T→G	6.8%	V724G (GTG→GGG)	PP_3622 →	isoquinoline 1‑oxidoreductase subunit beta
RA	4,119,486	C→A	7.7%	P726T (CCG→ACG)	PP_3622 →	isoquinoline 1‑oxidoreductase subunit beta
RA	4,141,559	A→C	9.7%	V174V (GTA→GTC)	PP_3645 →	L‑proline amide hydrolase
RA	4,143,882	T→A	8.4%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,883	T→A	9.0%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,162,099	T→C	13.3%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,108	G→A	14.5%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,184,912	A→T	10.5%	R230S (AGA→AGT)	PP_3681 →	putative Helicase
RA	4,191,109	A→T	10.0%	intergenic (‑441/‑716)	PP_5612 ← / → PP_5613	hypothetical protein/hypothetical protein
RA	4,196,292	G→A	12.9%	intergenic (+134/+235)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,293	G→C	11.1%	intergenic (+135/+234)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,294	T→C	11.0%	intergenic (+136/+233)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,302	T→G	10.2%	intergenic (+144/+225)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,210,754	T→G	7.4%	intergenic (+31/+38)	PP_3692 → / ← PP_5621	hypothetical protein/hypothetical protein
RA	4,210,758	C→A	8.3%	intergenic (+35/+34)	PP_3692 → / ← PP_5621	hypothetical protein/hypothetical protein
RA	4,228,383	G→A	13.3%	intergenic (‑127/+409)	PP_5624 ← / ← PP_3707	hypothetical protein/hypothetical protein
RA	4,236,197	G→A	9.5%	I192I (ATC→ATT)	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,236,545	A→T	8.0%	A76A (GCT→GCA)	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,236,548	A→T	8.0%	A75A (GCT→GCA) ‡	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,236,550	C→G	8.0%	A75P (GCT→CCT) ‡	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,236,552	A→T	8.0%	L74Q (CTG→CAG)	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,236,555	A→T	8.0%	L73Q (CTG→CAG)	catA‑I ←	catechol 1,2‑dioxygenase
RA	4,240,242	T→G	7.9%	R16S (AGA→AGC)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,247	C→A	8.1%	A15S (GCT→TCT)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,253	A→G	7.1%	W13R (TGG→CGG)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,248,056	G→T	5.4%	A657A (GCC→GCA)	PP_3724 ←	acyl‑CoA synthetase
RA	4,258,890	G→C	7.7%	R146P (CGT→CCT) ‡	PP_3732 →	enoyl‑CoA hydratase/isomerase family protein
RA	4,258,891	T→C	7.5%	R146R (CGT→CGC) ‡	PP_3732 →	enoyl‑CoA hydratase/isomerase family protein
RA	4,258,893	T→G	7.5%	V147G (GTG→GGG)	PP_3732 →	enoyl‑CoA hydratase/isomerase family protein
RA	4,258,896	T→C	7.2%	L148P (CTT→CCT)	PP_3732 →	enoyl‑CoA hydratase/isomerase family protein
RA	4,264,881	T→C	10.7%	F32L (TTC→CTC) ‡	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,883	C→G	10.0%	F32L (TTC→TTG) ‡	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,885	G→A	10.0%	S33N (AGC→AAC)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,267,946	A→T	9.3%	intergenic (‑89/+14)	galP‑IV ← / ← PP_3740	porin‑like protein/MFS transporter
RA	4,301,575	G→C	9.5%	intergenic (+65/‑1235)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,577	G→C	9.8%	intergenic (+67/‑1233)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,579	G→C	9.6%	intergenic (+69/‑1231)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,316,022	A→C	12.3%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,025	G→T	10.2%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,327,252	A→T	8.9%	N74Y (AAC→TAC) ‡	PP_3797 →	membrane protein
RA	4,327,253	A→T	8.9%	N74I (AAC→ATC) ‡	PP_3797 →	membrane protein
RA	4,330,968	G→A	6.8%	R138R (CGG→CGA)	PP_3802 →	cation ABC transporter ATP‑binding protein
RA	4,333,093	T→G	7.8%	intergenic (+33/+51)	PP_3804 → / ← yaiW	hypothetical protein/lipoprotein
RA	4,333,094	T→A	7.8%	intergenic (+34/+50)	PP_3804 → / ← yaiW	hypothetical protein/lipoprotein
RA	4,333,095	C→A	8.0%	intergenic (+35/+49)	PP_3804 → / ← yaiW	hypothetical protein/lipoprotein
RA	4,338,493	A→T	13.2%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,494	A→T	9.2%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,075	A→T	35.1%	intergenic (+60/‑271)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,076	G→C	34.9%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,081	A→G	43.9%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,082	C→T	32.5%	intergenic (+67/‑264)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,083	A→G	31.8%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,084	C→T	33.2%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,089	G→C	45.6%	intergenic (+74/‑257)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,090	A→T	29.6%	intergenic (+75/‑256)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,346,547	G→T	8.7%	A182D (GCC→GAC)	gor ←	glutathione reductase
RA	4,346,556	A→C	9.8%	V179G (GTC→GGC)	gor ←	glutathione reductase
RA	4,348,705	A→G	45.2%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,363,965	T→C	11.1%	intergenic (+40/‑34)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,969	T→G	12.5%	intergenic (+44/‑30)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,971	A→G	13.2%	intergenic (+46/‑28)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,972	C→T	13.6%	intergenic (+47/‑27)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,974	C→A	13.9%	intergenic (+49/‑25)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,363,978	G→A	13.5%	intergenic (+53/‑21)	adhP → / → PP_3840	alcohol dehydrogenase/hypothetical protein
RA	4,382,821	G→A	12.7%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,822	T→C	11.7%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,416,082	Δ1 bp	5.7%	intergenic (+24/+95)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,416,087:1	+G	5.7%	intergenic (+29/+90)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,416,651	A→C	6.9%	intergenic (+12/+194)	PP_3903 → / ← PP_3904	hypothetical protein/hypothetical protein
RA	4,416,652	G→T	6.9%	intergenic (+13/+193)	PP_3903 → / ← PP_3904	hypothetical protein/hypothetical protein
RA	4,447,838:1	+T	11.8%	intergenic (‑274/‑48)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,843	C→G	12.0%	intergenic (‑279/‑43)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,848	Δ1 bp	11.5%	intergenic (‑284/‑38)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,449,262	A→C	6.7%	E85A (GAG→GCG)	nicR →	HTH‑type transcriptional repressor NicR
RA	4,449,269	G→T	10.0%	L87L (CTG→CTT)	nicR →	HTH‑type transcriptional repressor NicR
RA	4,449,270	A→C	10.0%	K88Q (AAG→CAG)	nicR →	HTH‑type transcriptional repressor NicR
RA	4,449,277	G→T	8.7%	R90L (CGC→CTC)	nicR →	HTH‑type transcriptional repressor NicR
RA	4,449,986	T→A	6.0%	P20P (CCT→CCA)	nicA →	nicotinate dehydrogenase subunit A
RA	4,463,953	A→T	10.8%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,463,956	G→C	10.6%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,463,959	A→T	11.0%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,472,112	A→G	7.5%	A10A (GCA→GCG)	PP_3962 →	hypothetical protein
RA	4,479,114	A→T	8.9%	K155N (AAA→AAT)	ybdR →	Zn‑dependent oxidoreductase
RA	4,486,216	A→C	6.8%	S30R (AGC→CGC)	PP_3978 →	hypothetical protein
RA	4,525,551	A→C	6.3%	H161P (CAC→CCC)	mnmA →	tRNA 2‑thiouridine(34) synthase MnmA
RA	4,554,258	G→T	7.7%	S223* (TCG→TAG)	PP_4041 ←	glycoside hydrolase
RA	4,580,599	C→A	16.4%	Q943H (CAG→CAT) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,580,600	T→A	18.0%	Q943L (CAG→CTG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,580,603	T→A	18.0%	K942M (AAG→ATG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,580,604	T→G	18.0%	K942Q (AAG→CAG) ‡	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,586,030	2 bp→TC	100%	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,033:1	+G	100%	intergenic (+116/+99)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,056:1	+C	55.6%	intergenic (+139/+76)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,057:1	+C	40.6%	intergenic (+140/+75)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,597,751	C→A	10.5%	Q686H (CAG→CAT) ‡	PP_4071 ←	membrane protein
RA	4,597,752	T→A	10.5%	Q686L (CAG→CTG) ‡	PP_4071 ←	membrane protein
RA	4,597,755	T→A	10.5%	K685M (AAG→ATG) ‡	PP_4071 ←	membrane protein
RA	4,597,756	T→G	9.8%	K685Q (AAG→CAG) ‡	PP_4071 ←	membrane protein
RA	4,601,431	C→T	7.4%	G154D (GGC→GAC)	PP_4073 ←	hypothetical protein
RA	4,604,204	C→G	8.5%	P12A (CCG→GCG) ‡	PP_4076 →	hypothetical protein
RA	4,604,205	C→G	8.5%	P12R (CCG→CGG) ‡	PP_4076 →	hypothetical protein
RA	4,605,372	A→C	8.9%	Q263P (CAG→CCG) ‡	PP_4077 →	hypothetical protein
RA	4,605,373	G→T	9.9%	Q263H (CAG→CAT) ‡	PP_4077 →	hypothetical protein
RA	4,605,501	C→G	8.6%	A306G (GCC→GGC)	PP_4077 →	hypothetical protein
RA	4,605,506	G→C	8.3%	E308Q (GAG→CAG) ‡	PP_4077 →	hypothetical protein
RA	4,605,507	A→T	8.6%	E308V (GAG→GTG) ‡	PP_4077 →	hypothetical protein
RA	4,605,508	G→C	10.0%	E308D (GAG→GAC) ‡	PP_4077 →	hypothetical protein
RA	4,605,513	C→G	8.8%	A310G (GCC→GGC)	PP_4077 →	hypothetical protein
RA	4,647,850	T→G	7.3%	D430A (GAC→GCC) ‡	PP_4112 ←	sulfate transporter
RA	4,647,851	C→A	7.6%	D430Y (GAC→TAC) ‡	PP_4112 ←	sulfate transporter
RA	4,654,891	T→C	9.0%	intergenic (+43/‑215)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,663,203	T→G	7.1%	A689A (GCT→GCG)	nuoG →	NADH‑quinone oxidoreductase subunit G
RA	4,665,001	C→G	7.8%	R45R (CGC→CGG)	nuoI →	NADH‑quinone oxidoreductase subunit I
RA	4,665,004	C→G	8.3%	Y46* (TAC→TAG)	nuoI →	NADH‑quinone oxidoreductase subunit I
RA	4,674,591	C→T	7.3%	R455C (CGC→TGC)	PP_4137 →	outer membrane siderophore receptor
RA	4,676,674	A→G	7.0%	Y634H (TAC→CAC)	ldcC ←	lysine decarboxylase
RA	4,695,785	G→T	6.3%	R167S (CGC→AGC)	PP_4155 ←	amine oxidase
RA	4,695,789	C→A	6.0%	A165A (GCG→GCT)	PP_4155 ←	amine oxidase
RA	4,706,189	C→T	7.2%	L101L (CTG→CTA)	PP_4162 ←	membrane protein
RA	4,707,318	C→G	6.0%	intergenic (‑20/+90)	PP_4163 ← / ← PP_4164	hypothetical protein/alpha/beta hydrolase
RA	4,723,510	T→C	6.5%	Q18Q (CAA→CAG)	htpG ←	chaperone protein HtpG
RA	4,723,515	T→G	6.5%	K17Q (AAG→CAG)	htpG ←	chaperone protein HtpG
RA	4,730,041	C→G	7.6%	G468A (GGC→GCC)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,733,983	G→A	100%	A551V (GCG→GTG)	sucA ←	2‑oxoglutarate dehydrogenase subunit E1
RA	4,740,805	Δ1 bp	100%	intergenic (+42/+711)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,816	T→G	100%	intergenic (+53/+700)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,819	2 bp→CT	100%	intergenic (+56/+696)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,839	C→G	9.5%	intergenic (+76/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,841	T→A	9.5%	intergenic (+78/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,844	C→G	9.7%	intergenic (+81/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,229	A→C	100%	intergenic (+466/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,231	C→G	100%	intergenic (+468/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,234	C→T	100%	intergenic (+471/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,236	2 bp→TG	100%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,239	A→G	100%	intergenic (+476/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,243	3 bp→TGC	100%	intergenic (+480/+271)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,255	C→T	100%	intergenic (+492/+261)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,257	A→C	100%	intergenic (+494/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,260	2 bp→GC	100%	intergenic (+497/+255)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,263	A→C	100%	intergenic (+500/+253)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,272	A→G	100%	intergenic (+509/+244)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	100%	intergenic (+511/+242)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	G→C	100%	intergenic (+513/+240)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,278	C→T	100%	intergenic (+515/+238)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283:1	+T	100%	intergenic (+520/+233)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,289	C→G	100%	intergenic (+526/+227)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,292	C→T	100%	intergenic (+529/+224)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,294	C→G	100%	intergenic (+531/+222)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,296	A→C	100%	intergenic (+533/+220)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298	C→T	100%	intergenic (+535/+218)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,761,591	C→G	6.2%	P84A (CCG→GCG)	pvdN →	pyoverdine biosynthesis‑like protein
RA	4,763,160	C→T	7.4%	S166S (AGC→AGT)	pvdO →	pyoverdine biosynthesis‑like protein
RA	4,763,178	T→C	8.5%	Y172Y (TAT→TAC)	pvdO →	pyoverdine biosynthesis‑like protein
RA	4,763,459	G→A	7.0%	G266D (GGC→GAC)	pvdO →	pyoverdine biosynthesis‑like protein
RA	4,768,303	A→T	12.5%	L170Q (CTG→CAG)	PP_4218 ←	lipase/esterase family protein
RA	4,772,509	G→T	8.2%	P2253Q (CCA→CAA)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,772,512	A→C	6.7%	L2252W (TTG→TGG)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,782,601	C→G	9.4%	P1571P (CCG→CCC)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,782,608	A→G	10.7%	L1569P (CTC→CCC)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,785,772	G→A	8.0%	R514R (CGC→CGT)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,787,508	C→T	7.7%	G2111D (GGT→GAT)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,793,958	C→T	10.3%	intergenic (‑119/+37)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,793,961	C→T	10.3%	intergenic (‑122/+34)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,793,968	A→T	11.3%	intergenic (‑129/+27)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,793,969	A→T	11.3%	intergenic (‑130/+26)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,793,976	A→G	11.9%	intergenic (‑137/+19)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,793,979	A→G	11.8%	intergenic (‑140/+16)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,796,069	G→A	7.4%	A125V (GCA→GTA)	pvdH ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	4,796,604	A→G	17.5%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,612	C→T	21.4%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,614	G→C	21.4%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,617	G→C	19.3%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,619	A→G	19.7%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,627	C→T	16.6%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,804,755	C→T	7.1%	V105I (GTC→ATC)	PP_4233 ←	oxidoreductase small subunit
RA	4,808,189	G→C	11.8%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,192	G→C	11.8%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,811,541	G→T	8.2%	Q181H (CAG→CAT)	dsbG →	protein disulfide isomerase
RA	4,824,151	A→G	6.3%	F2347L (TTC→CTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,152	C→T	7.8%	E2346E (GAG→GAA)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,826,563	C→T	7.7%	A1543T (GCA→ACA)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,043	C→A	8.0%	intergenic (+18/+134)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,046	C→G	9.2%	intergenic (+21/+131)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,054	A→T	7.9%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,057	T→A	7.7%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,060	A→T	7.6%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,068	C→G	7.7%	intergenic (+43/+109)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,071	T→G	7.4%	intergenic (+46/+106)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,842,904:1	+G	9.8%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,853,629	T→A	6.1%	H491L (CAC→CTC)	dnaX ←	DNA polymerase III subunit gamma
RA	4,862,722	Δ1 bp	8.0%	coding (3151/3489 nt)	smc ←	chromosome partition protein Smc
RA	4,889,746	A→T	5.7%	K14* (AAG→TAG) ‡	glxR →	2‑hydroxy‑3‑oxopropionate reductase
RA	4,889,747	A→T	5.7%	K14M (AAG→ATG) ‡	glxR →	2‑hydroxy‑3‑oxopropionate reductase
RA	4,906,463	A→T	6.1%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,909,921	C→G	9.1%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,922	C→G	9.1%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,919,006	A→T	8.0%	T469S (ACC→TCC)	PP_4328 →	hypothetical protein
RA	4,921,585	G→T	10.3%	R665L (CGG→CTG)	PP_4330 →	toxin‑like protein
RA	4,921,588	C→G	10.6%	A666G (GCC→GGC) ‡	PP_4330 →	toxin‑like protein
RA	4,921,589	C→G	11.7%	A666A (GCC→GCG) ‡	PP_4330 →	toxin‑like protein
RA	4,921,592	A→C	10.3%	P667P (CCA→CCC)	PP_4330 →	toxin‑like protein
RA	4,930,408	G→C	7.8%	L189V (CTG→GTG)	cheZ ←	protein phosphatase CheZ
RA	4,930,409	T→A	9.0%	T188T (ACA→ACT) ‡	cheZ ←	protein phosphatase CheZ
RA	4,930,410	G→C	8.3%	T188R (ACA→AGA) ‡	cheZ ←	protein phosphatase CheZ
RA	4,936,626	G→C	7.7%	intergenic (‑37/‑381)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,628	G→C	7.7%	intergenic (‑39/‑379)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,630	G→C	7.7%	intergenic (‑41/‑377)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,945,198	C→G	9.2%	intergenic (+558/+240)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,201	C→G	9.8%	intergenic (+561/+237)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,977,949	G→C	10.9%	P217P (CCC→CCG)	flgH ←	flagellar L‑ring protein
JC	4,980,585	+GGC	100%	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,988,362	G→C	8.3%	intergenic (+32/+62)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,363	C→A	8.3%	intergenic (+33/+61)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,364	T→G	8.0%	intergenic (+34/+60)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,365	G→C	8.0%	intergenic (+35/+59)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	5,030,748	A→G	7.4%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,751	C→T	7.2%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,041,188	Δ1 bp	7.0%	intergenic (+166/‑496)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,079,126	T→A	9.7%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,129	T→A	10.3%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,080,480	G→A	8.5%	H353H (CAC→CAT)	lysC ←	aspartokinase
RA	5,080,485	A→T	8.7%	S352T (TCG→ACG)	lysC ←	aspartokinase
RA	5,080,486	A→T	8.8%	R351R (CGT→CGA)	lysC ←	aspartokinase
RA	5,080,491	T→C	7.3%	M350V (ATG→GTG)	lysC ←	aspartokinase
RA	5,082,737	A→T	7.5%	L510* (TTG→TAG)	alaS ←	alanine‑‑tRNA ligase
RA	5,089,068	Δ1 bp	5.7%	coding (771/1029 nt)	astA‑I ←	arginine N‑succinyltransferase subunit beta
RA	5,089,074	G→C	5.8%	G255G (GGC→GGG)	astA‑I ←	arginine N‑succinyltransferase subunit beta
RA	5,089,078:1	+C	5.8%	coding (761/1029 nt)	astA‑I ←	arginine N‑succinyltransferase subunit beta
RA	5,090,047	A→G	6.0%	L297P (CTG→CCG)	astA‑II ←	arginine N‑succinyltransferase subunit alpha
RA	5,090,049	G→C	6.0%	G296G (GGC→GGG)	astA‑II ←	arginine N‑succinyltransferase subunit alpha
RA	5,093,609	G→A	7.5%	R5* (CGA→TGA)	PP_4482 ←	AraC family transcriptional regulator
RA	5,096,286	G→T	7.6%	Y160* (TAC→TAA)	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,096,289	A→C	9.7%	P159P (CCT→CCG)	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,097,141	A→C	9.2%	intergenic (+132/+160)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,097,144	C→A	7.8%	intergenic (+135/+157)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,097,145	T→G	7.8%	intergenic (+136/+156)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,097,148	G→T	7.8%	intergenic (+139/+153)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,144	C→T	11.1%	R83H (CGC→CAC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,139,337	G→C	9.1%	V143V (GTG→GTC)	PP_4524 →	sodium‑solute symporter
RA	5,141,207	T→G	8.4%	N119H (AAC→CAC)	PP_4525 ←	LysR family transcriptional regulator
RA	5,141,208	C→A	8.0%	V118V (GTG→GTT)	PP_4525 ←	LysR family transcriptional regulator
RA	5,141,700	T→C	7.5%	V12A (GTG→GCG)	PP_4526 →	MFS transporter
RA	5,173,244	T→C	18.6%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,247	G→C	18.7%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,248	G→C	20.8%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,251	G→A	18.8%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,181,146	A→T	10.2%	L266H (CTC→CAC)	PP_4560 ←	ribonuclease BN
RA	5,181,149	A→T	10.2%	L265Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,152	A→T	10.2%	L264Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,155	A→T	10.2%	V263E (GTG→GAG)	PP_4560 ←	ribonuclease BN
RA	5,181,160	Δ1 bp	7.5%	coding (783/957 nt)	PP_4560 ←	ribonuclease BN
RA	5,182,059	G→T	12.5%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,065	T→G	12.2%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,066	C→A	13.1%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,117	C→T	7.9%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,120	A→G	12.1%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,187,176	G→A	10.0%	W171* (TGG→TGA)	PP_4566 →	drug/metabolite transporter
RA	5,187,177	A→T	9.5%	I172F (ATC→TTC) ‡	PP_4566 →	drug/metabolite transporter
RA	5,187,178	T→C	10.0%	I172T (ATC→ACC) ‡	PP_4566 →	drug/metabolite transporter
RA	5,187,972	A→T	7.8%	E159D (GAA→GAT)	PP_4567 →	hypothetical protein
RA	5,187,979	T→G	8.2%	L162V (TTG→GTG) ‡	PP_4567 →	hypothetical protein
RA	5,187,980	T→C	8.2%	L162S (TTG→TCG) ‡	PP_4567 →	hypothetical protein
RA	5,187,983	G→A	8.4%	R163H (CGC→CAC) ‡	PP_4567 →	hypothetical protein
RA	5,187,984	C→A	8.3%	R163R (CGC→CGA) ‡	PP_4567 →	hypothetical protein
RA	5,187,991	A→T	8.2%	I166F (ATC→TTC)	PP_4567 →	hypothetical protein
RA	5,187,995	C→T	6.8%	P167L (CCC→CTC)	PP_4567 →	hypothetical protein
RA	5,191,170	C→T	6.0%	V82I (GTC→ATC)	cysK ←	cysteine synthase A
RA	5,194,887	T→G	19.5%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,888	C→A	17.4%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,200,024	G→A	7.1%	R66C (CGC→TGC)	PP_4580 ←	hypothetical protein
RA	5,200,026	T→C	7.2%	Y65C (TAC→TGC)	PP_4580 ←	hypothetical protein
RA	5,200,028	G→C	7.4%	H64Q (CAC→CAG) ‡	PP_4580 ←	hypothetical protein
RA	5,200,030	G→A	8.0%	H64Y (CAC→TAC) ‡	PP_4580 ←	hypothetical protein
RA	5,200,032	T→C	8.2%	Q63R (CAG→CGG)	PP_4580 ←	hypothetical protein
RA	5,229,191	Δ1 bp	11.5%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,195	C→G	12.0%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,198	C→G	11.5%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,201:1	+C	12.8%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,213	T→C	8.3%	intergenic (‑155/+21)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,234,538	G→A	9.8%	R298H (CGC→CAC) ‡	PP_4612 →	fec operon regulator FecR
RA	5,234,539	C→G	9.7%	R298R (CGC→CGG) ‡	PP_4612 →	fec operon regulator FecR
RA	5,234,542	C→G	9.7%	Y299* (TAC→TAG)	PP_4612 →	fec operon regulator FecR
RA	5,234,543	T→C	11.1%	W300R (TGG→CGG)	PP_4612 →	fec operon regulator FecR
RA	5,239,884	G→A	9.7%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,889	T→C	9.3%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,257,689	A→C	11.0%	V38G (GTG→GGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,696	G→C	9.9%	P36A (CCG→GCG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,697	G→C	10.1%	R35R (CGC→CGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,704	G→T	10.0%	P33H (CCC→CAC)	PP_4634 ←	alpha/beta family hydrolase
RA	5,264,290:1	+T	10.2%	intergenic (‑44/+40)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,293	T→G	10.0%	intergenic (‑47/+37)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,296	C→A	10.4%	intergenic (‑50/+34)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,299	Δ1 bp	10.2%	intergenic (‑53/+31)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,272,185	G→A	6.1%	A46T (GCT→ACT)	PP_4647 →	transcriptional regulator, LuxR family
RA	5,278,468	G→C	6.5%	intergenic (+208/‑22)	PP_4652 → / → purP	membrane protein/adenine:H+ symporter
RA	5,278,469	G→C	7.5%	intergenic (+209/‑21)	PP_4652 → / → purP	membrane protein/adenine:H+ symporter
RA	5,278,470	G→C	6.3%	intergenic (+210/‑20)	PP_4652 → / → purP	membrane protein/adenine:H+ symporter
RA	5,278,477	T→A	6.0%	intergenic (+217/‑13)	PP_4652 → / → purP	membrane protein/adenine:H+ symporter
RA	5,293,721	G→T	6.6%	A222A (GCC→GCA)	mmsA‑II ←	methylmalonate‑semialdehyde dehydrogenase
RA	5,293,725	T→C	6.6%	D221G (GAT→GGT)	mmsA‑II ←	methylmalonate‑semialdehyde dehydrogenase
RA	5,295,088	G→C	6.0%	Q190H (CAG→CAC)	PP_4668 →	LysR family transcriptional regulator
RA	5,295,089	G→C	6.1%	V191L (GTG→CTG)	PP_4668 →	LysR family transcriptional regulator
RA	5,295,092	A→G	5.6%	T192A (ACG→GCG)	PP_4668 →	LysR family transcriptional regulator
RA	5,297,238	A→T	7.1%	L42H (CTC→CAC)	TpbB ←	diguanylate cyclase
RA	5,297,241	A→T	7.2%	V41E (GTG→GAG)	TpbB ←	diguanylate cyclase
RA	5,300,650	C→G	7.3%	P1041P (CCG→CCC)	recB ←	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
RA	5,304,814	Δ1 bp	5.7%	coding (2438/3483 nt)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,319,173	C→A	11.5%	K67N (AAG→AAT) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,319,174	T→A	9.1%	K67M (AAG→ATG) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,319,175	T→G	11.3%	K67Q (AAG→CAG) ‡	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,361,071	A→T	6.4%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,072	A→T	6.4%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,363,587	G→C	7.0%	A60G (GCA→GGA)	glmM ←	phosphoglucosamine mutase
RA	5,363,590	G→C	7.1%	S59C (TCC→TGC)	glmM ←	phosphoglucosamine mutase
RA	5,376,390	A→T	10.8%	L392Q (CTG→CAG)	dnaK ←	chaperone protein DnaK
RA	5,376,393	A→T	10.6%	L391Q (CTG→CAG)	dnaK ←	chaperone protein DnaK
RA	5,376,396	A→T	10.8%	L390Q (CTG→CAG)	dnaK ←	chaperone protein DnaK
RA	5,390,097	T→A	8.7%	intergenic (+186/‑536)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,099	T→A	10.5%	intergenic (+188/‑534)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,101	T→A	10.4%	intergenic (+190/‑532)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,391,329	A→G	7.5%	E82E (GAA→GAG)	PP_5707 →	hypothetical protein
RA	5,391,330	C→T	7.4%	L83F (CTC→TTC)	PP_5707 →	hypothetical protein
RA	5,406,053	C→G	8.1%	A185A (GCG→GCC)	PP_4750 ←	amino acid ABC transporter permease
RA	5,406,056	C→G	8.1%	A184A (GCG→GCC)	PP_4750 ←	amino acid ABC transporter permease
RA	5,408,458	G→T	6.3%	H94N (CAC→AAC)	PP_4752 ←	Xaa‑Pro aminopeptidase
RA	5,419,959	G→C	7.0%	A215A (GCG→GCC)	PP_4759 →	transcriptional regulator, GntR family
RA	5,419,962	G→C	6.9%	R216R (CGG→CGC)	PP_4759 →	transcriptional regulator, GntR family
RA	5,420,450	A→G	12.3%	W217R (TGG→CGG)	PP_4760 ←	alcohol dehydrogenase
RA	5,420,452	G→C	12.3%	A216G (GCC→GGC)	PP_4760 ←	alcohol dehydrogenase
RA	5,420,454	C→T	11.4%	P215P (CCG→CCA)	PP_4760 ←	alcohol dehydrogenase
RA	5,425,738	C→T	5.8%	Q92* (CAG→TAG)	PP_4765 →	hypothetical protein
RA	5,462,393	T→G	7.3%	intergenic (+16/+18)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,394	G→C	6.2%	intergenic (+17/+17)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,395	C→A	6.3%	intergenic (+18/+16)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,463,400	T→A	11.3%	intergenic (‑51/+48)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,401	T→A	11.3%	intergenic (‑52/+47)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,407	Δ1 bp	9.8%	intergenic (‑58/+41)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,472,538	A→G	8.1%	M94T (ATG→ACG)	rsfS ←	ribosomal silencing factor RsfS
RA	5,472,541	T→C	8.0%	H93R (CAC→CGC) ‡	rsfS ←	ribosomal silencing factor RsfS
RA	5,472,542	G→A	7.7%	H93Y (CAC→TAC) ‡	rsfS ←	ribosomal silencing factor RsfS
RA	5,472,545	C→T	7.2%	V92M (GTG→ATG)	rsfS ←	ribosomal silencing factor RsfS
RA	5,479,939:1	+G	9.8%	coding (463/993 nt)	prmA →	ribosomal protein L11 methyltransferase
RA	5,485,153	A→G	19.7%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,154	T→C	20.7%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,159	G→A	19.9%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,162	T→C	20.5%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,167	G→A	14.7%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,168	C→T	14.3%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,171	C→T	15.2%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,486,478	A→G	6.1%	Y413C (TAC→TGC)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,487,904	C→G	8.1%	T411T (ACC→ACG)	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,487,908	A→T	7.7%	M413L (ATG→TTG) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,487,910	G→C	7.6%	M413I (ATG→ATC) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,487,912	A→T	7.8%	N414I (AAC→ATC)	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,487,916	C→G	9.6%	G415G (GGC→GGG)	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,490,732	G→C	7.1%	S17R (AGC→AGG)	PP_5714 ←	hypothetical protein
RA	5,496,997:1	+C	11.3%	coding (70/1212 nt)	cobL →	precorrin‑6Y C(5,15)‑methyltransferase
RA	5,496,997:2	+A	11.3%	coding (70/1212 nt)	cobL →	precorrin‑6Y C(5,15)‑methyltransferase
RA	5,497,004	T→A	11.3%	L26Q (CTG→CAG)	cobL →	precorrin‑6Y C(5,15)‑methyltransferase
RA	5,497,007	T→A	11.9%	L27Q (CTG→CAG)	cobL →	precorrin‑6Y C(5,15)‑methyltransferase
RA	5,509,445	A→T	7.3%	A350A (GCA→GCT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,449	G→C	8.0%	A352P (GCC→CCC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,454	G→C	8.3%	G353G (GGG→GGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,458	A→T	9.0%	S355C (AGC→TGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,517,377	T→C	5.5%	N396N (AAT→AAC)	PP_4849 →	molecular chaperone DnaK
RA	5,526,720	G→A	8.5%	S78N (AGC→AAC)	PP_4860 →	mannose‑6‑phosphate isomerase
RA	5,536,721	G→A	7.3%	G176S (GGC→AGC)	nadE →	NH(3)‑dependent NAD(+) synthetase
RA	5,539,022	C→A	7.4%	R655L (CGT→CTT)	PP_4872 ←	hypothetical protein
RA	5,540,323	G→T	9.7%	S221S (TCC→TCA)	PP_4872 ←	hypothetical protein
RA	5,552,353	G→A	9.1%	intergenic (+16/+645)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,355	C→A	9.1%	intergenic (+18/+643)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,356	A→T	8.8%	intergenic (+19/+642)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,357	T→G	9.0%	intergenic (+20/+641)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,359	T→C	9.0%	intergenic (+22/+639)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
JC	5,555,608	+GCC	100%	intergenic (‑84/+87)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,560,540	A→G	9.2%	intergenic (‑44/+258)	hisZ ← / ← hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
RA	5,565,749	G→A	8.9%	H579H (CAC→CAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,754	A→T	8.8%	C578S (TGC→AGC)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,755	A→T	8.9%	A577A (GCT→GCA)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,760	T→C	9.0%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,413	T→A	10.4%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,416	T→A	10.4%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,570,177	T→G	14.5%	A24A (GCA→GCC) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,178	G→C	12.9%	A24G (GCA→GGA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,179	C→A	12.8%	A24S (GCA→TCA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,574,790	G→C	6.1%	F168L (TTC→TTG) ‡	motB ←	flagellar motor rotation protein
RA	5,574,791	A→G	5.7%	F168S (TTC→TCC) ‡	motB ←	flagellar motor rotation protein
RA	5,578,340	T→A	7.3%	L161Q (CTG→CAG)	rhdA →	thiosulfate sulfurtransferase
RA	5,581,667	G→A	6.1%	P234P (CCG→CCA)	PP_4910 →	hypothetical protein
RA	5,591,637	G→T	11.6%	A82D (GCC→GAC)	nudF ←	ADP‑ribose/sugar pyrophosphatase
RA	5,602,162	T→A	5.2%	E440D (GAA→GAT)	PP_4924 ←	subtilase family serine protease
RA	5,602,173	T→A	5.3%	I437F (ATC→TTC)	PP_4924 ←	subtilase family serine protease
RA	5,611,703	G→A	7.1%	A233T (GCC→ACC)	PP_4931 →	hypothetical protein
RA	5,612,542	C→T	6.8%	R122C (CGC→TGC)	PP_4932 →	D‑arabinose 1‑dehydrogenase
RA	5,614,294	T→C	6.5%	S410G (AGT→GGT)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,619,466	C→T	8.8%	T345T (ACG→ACA)	PP_4938 ←	glycosyl transferase
RA	5,619,471	A→G	8.9%	C344R (TGT→CGT)	PP_4938 ←	glycosyl transferase
RA	5,621,557	Δ1 bp	8.2%	coding (729/957 nt)	PP_4940 ←	glycosyltransferase
RA	5,632,841	C→A	9.6%	L791M (CTG→ATG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,632,842	T→G	7.9%	L791R (CTG→CGG) ‡	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,457	T→G	11.3%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,458	C→A	11.1%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,646,266	A→T	7.0%	D540V (GAC→GTC)	PP_4954 →	membrane protein
RA	5,650,674	A→C	11.6%	H173Q (CAT→CAG) ‡	PP_4959 ←	diguanylate cyclase
RA	5,650,675	T→A	11.6%	H173L (CAT→CTT) ‡	PP_4959 ←	diguanylate cyclase
RA	5,650,676	G→T	11.7%	H173N (CAT→AAT) ‡	PP_4959 ←	diguanylate cyclase
RA	5,652,937	T→G	11.8%	intergenic (‑38/+123)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,005	A→T	6.8%	intergenic (‑106/+55)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,006	C→G	6.4%	intergenic (‑107/+54)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,007	A→T	6.8%	intergenic (‑108/+53)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,660,182	G→T	11.3%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,185	A→C	11.4%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,669,964	C→G	9.3%	H147Q (CAC→CAG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,669,965	C→G	9.6%	L148V (CTG→GTG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,674,750:1	+G	100%	intergenic (+112/+28)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,674,753	G→C	100%	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,679,841	G→T	11.1%	intergenic (+60/‑104)	bioA → / → rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
RA	5,679,842	A→T	12.5%	intergenic (+61/‑103)	bioA → / → rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
RA	5,679,843	A→C	8.2%	intergenic (+62/‑102)	bioA → / → rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
JC	5,681,415	+CGGG	94.8%	intergenic (‑133/+71)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,682,706	G→A	7.4%	A1396V (GCG→GTG)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,794	C→T	9.3%	S700N (AGC→AAC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,804	G→C	6.9%	R697G (CGC→GGC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,806	C→T	6.9%	R696H (CGC→CAC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,809	T→A	6.6%	D695V (GAC→GTC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,812	A→G	6.9%	V694A (GTG→GCG)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,684,814	G→C	6.9%	A693A (GCC→GCG)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,900	G→C	6.4%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,902	G→C	6.4%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,909	G→C	6.6%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,911	G→C	6.6%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,700,372	A→G	5.2%	I284V (ATT→GTT) ‡	phaA →	poly(3‑hydroxyalkanoate) polymerase
RA	5,700,374	T→A	5.2%	I284I (ATT→ATA) ‡	phaA →	poly(3‑hydroxyalkanoate) polymerase
RA	5,709,377	G→C	6.8%	R1132P (CGG→CCG) ‡	PP_5009 →	hypothetical protein
RA	5,709,378	G→C	6.8%	R1132R (CGG→CGC) ‡	PP_5009 →	hypothetical protein
RA	5,718,990	G→A	7.8%	L563L (CTG→CTA)	PP_5020 →	methyl‑accepting chemotaxis protein
RA	5,726,804:1	+G	11.8%	coding (162/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,726,809	Δ1 bp	12.3%	coding (157/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,728,840	A→G	9.6%	intergenic (‑203/+121)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,843	A→T	9.4%	intergenic (‑206/+118)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,844	A→T	10.0%	intergenic (‑207/+117)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,847	C→T	10.1%	intergenic (‑210/+114)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,730,957	A→T	10.2%	I128N (ATT→AAT)	hutG ←	N‑formylglutamate deformylase
RA	5,734,042	A→C	18.7%	intergenic (‑68/+89)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,740,457	G→A	19.5%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,467	T→G	36.7%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,470	A→T	27.6%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,471	A→T	27.9%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,474	C→A	23.8%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,743,349	A→G	8.3%	intergenic (‑182/+65)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,350	C→T	8.3%	intergenic (‑183/+64)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,351	A→C	8.3%	intergenic (‑184/+63)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,352	G→T	9.1%	intergenic (‑185/+62)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,360	C→T	9.2%	intergenic (‑193/+54)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,362	T→C	9.4%	intergenic (‑195/+52)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,363	G→A	9.8%	intergenic (‑196/+51)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,365	A→G	9.9%	intergenic (‑198/+49)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,373	A→C	10.0%	intergenic (‑206/+41)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,374	G→T	10.2%	intergenic (‑207/+40)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,375	A→G	10.2%	intergenic (‑208/+39)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,376	C→T	9.8%	intergenic (‑209/+38)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,751,719	G→T	8.8%	intergenic (‑157/‑314)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,761,198	G→A	8.3%	V84M (GTG→ATG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,201	A→G	8.2%	T85A (ACC→GCC)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,204	A→T	7.9%	K86* (AAG→TAG) ‡	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,205	A→T	7.9%	K86M (AAG→ATG) ‡	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,208	C→T	7.8%	A87V (GCC→GTC)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,211	T→C	7.6%	I88T (ATC→ACC)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,763,633	G→C	8.1%	A337P (GCC→CCC)	PP_5057 →	M23/M37 family peptidase
RA	5,763,637	A→C	8.1%	K338T (AAG→ACG) ‡	PP_5057 →	M23/M37 family peptidase
RA	5,763,638	G→T	8.2%	K338N (AAG→AAT) ‡	PP_5057 →	M23/M37 family peptidase
RA	5,763,642	G→C	8.5%	D340H (GAC→CAC)	PP_5057 →	M23/M37 family peptidase
RA	5,770,438	A→T	6.0%	L145H (CTT→CAT)	PP_5060 ←	hypothetical protein
RA	5,770,444	A→T	5.9%	M143K (ATG→AAG)	PP_5060 ←	hypothetical protein
RA	5,785,395	G→A	7.0%	S133S (TCG→TCA)	PP_5068 →	hypothetical protein
RA	5,789,021	T→G	12.5%	C60G (TGC→GGC) ‡	ynfM →	efflux transporter
RA	5,789,022	G→C	13.2%	C60S (TGC→TCC) ‡	ynfM →	efflux transporter
RA	5,789,023	C→A	12.8%	C60* (TGC→TGA) ‡	ynfM →	efflux transporter
RA	5,790,143	A→T	8.8%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,150	A→G	8.9%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,151	C→G	9.0%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,152	C→T	8.9%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,620	A→T	8.0%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,625	A→T	7.9%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,791,620	A→C	7.4%	L33R (CTG→CGG)	hemE ←	uroporphyrinogen decarboxylase
RA	5,791,622	G→C	7.6%	Y32* (TAC→TAG)	hemE ←	uroporphyrinogen decarboxylase
RA	5,791,625	G→C	5.9%	R31R (CGC→CGG)	hemE ←	uroporphyrinogen decarboxylase
RA	5,798,193	C→T	8.1%	intergenic (‑294/+80)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,198	T→C	10.4%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,201	G→A	10.5%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,206	A→G	12.5%	intergenic (‑307/+67)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,827,645	G→A	10.9%	A186A (GCG→GCA)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,827,647	A→C	10.9%	Q187P (CAG→CCG)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,827,659	T→C	9.4%	V191A (GTG→GCG)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,840,541	C→G	7.3%	E14Q (GAG→CAG)	sseA ←	3‑mercaptopyruvate sulfurtransferase
RA	5,843,495	T→C	8.1%	G39G (GGT→GGC)	PP_5122 →	GMC family oxidoreductase
RA	5,843,500	G→C	8.3%	G41A (GGC→GCC)	PP_5122 →	GMC family oxidoreductase
RA	5,845,958	A→G	8.5%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,845,963	G→A	8.4%	intergenic (+35/+56)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,845,972	T→C	9.1%	intergenic (+44/+47)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,845,977	C→T	9.4%	intergenic (+49/+42)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,864,668	A→G	5.6%	F495L (TTC→CTC)	cadA‑III ←	cadmium translocating P‑type ATPase
RA	5,864,669	C→T	5.6%	E494E (GAG→GAA)	cadA‑III ←	cadmium translocating P‑type ATPase
RA	5,867,733:1	+C	8.6%	intergenic (‑28/+24)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,867,738	Δ1 bp	8.3%	intergenic (‑33/+19)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,882,049	G→A	7.8%	A204T (GCT→ACT)	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,090	C→T	11.7%	T217T (ACC→ACT)	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,091	C→G	11.7%	Q218E (CAG→GAG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,882,092	A→G	11.2%	Q218R (CAG→CGG) ‡	serA →	bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase
RA	5,890,791	A→C	9.1%	intergenic (+79/+41)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,792	A→T	8.9%	intergenic (+80/+40)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,793	G→T	8.7%	intergenic (+81/+39)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,903,165	A→C	12.1%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,907,906:1	+G	7.4%	coding (61/1095 nt)	spuE ←	spermidine/putrescine ABC transporter substrate‑binding protein
RA	5,907,912	Δ1 bp	7.5%	coding (55/1095 nt)	spuE ←	spermidine/putrescine ABC transporter substrate‑binding protein
RA	5,911,663	G→T	5.8%	R165R (CGC→CGA)	spuB ←	glutamylpolyamine synthetase
RA	5,911,666	A→C	5.7%	G164G (GGT→GGG)	spuB ←	glutamylpolyamine synthetase
RA	5,919,639	G→T	7.3%	K75N (AAG→AAT)	PP_5190 →	type II secretion system protein
RA	5,934,695	A→T	9.1%	noncoding (30/180 nt)	PP_mr61 →	6S ncRNA
RA	5,938,098	T→C	9.4%	L220P (CTG→CCG)	rbbA →	ribosome‑associated ATPase
RA	5,940,484	A→C	10.9%	D108A (GAC→GCC)	yhhJ →	translation‑like protein
RA	5,940,487	T→G	8.6%	L109R (CTG→CGG)	yhhJ →	translation‑like protein
RA	5,940,490	T→C	8.6%	L110P (CTG→CCG) ‡	yhhJ →	translation‑like protein
RA	5,940,491	G→A	8.5%	L110L (CTG→CTA) ‡	yhhJ →	translation‑like protein
RA	5,940,494	C→A	8.6%	A111A (GCC→GCA)	yhhJ →	translation‑like protein
RA	5,940,497	G→T	8.5%	G112G (GGG→GGT)	yhhJ →	translation‑like protein
RA	5,944,535	C→T	14.1%	intergenic (‑301/+39)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,944,536	A→T	14.1%	intergenic (‑302/+38)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,944,537	A→G	14.1%	intergenic (‑303/+37)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,945,379	T→G	5.7%	D55A (GAT→GCT) ‡	PP_5212 ←	iron‑sulfur‑binding oxidoreductase
RA	5,945,380	C→G	5.7%	D55H (GAT→CAT) ‡	PP_5212 ←	iron‑sulfur‑binding oxidoreductase
RA	5,945,381	C→A	6.9%	Q54H (CAG→CAT)	PP_5212 ←	iron‑sulfur‑binding oxidoreductase
RA	5,948,629	T→C	6.5%	intergenic (‑10/+72)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,953,402	Δ1 bp	6.6%	coding (173/645 nt)	PP_5218 →	DedA family protein
RA	5,963,846	T→G	10.5%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,851	C→A	12.3%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,967,628	A→C	6.9%	L22R (CTG→CGG)	amtB ←	ammonium transporter AmtB
RA	5,967,633	A→T	6.0%	L20L (CTT→CTA) ‡	amtB ←	ammonium transporter AmtB
RA	5,967,634	A→T	6.1%	L20H (CTT→CAT) ‡	amtB ←	ammonium transporter AmtB
RA	5,967,639	G→T	6.2%	P18P (CCC→CCA)	amtB ←	ammonium transporter AmtB
RA	5,979,378	A→G	6.5%	H8R (CAC→CGC)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,980,179	A→G	9.1%	Q275R (CAG→CGG) ‡	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,980,180	G→C	9.1%	Q275H (CAG→CAC) ‡	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,980,181	C→T	9.2%	R276W (CGG→TGG)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,984,455	G→A	9.1%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,509	G→T	6.5%	A204E (GCG→GAG)	ycaC‑II ←	putative hydrolase
RA	5,985,761	G→A	8.9%	V10M (GTG→ATG)	PP_5245 →	AraC family transcriptional regulator
RA	5,988,750	T→C	10.7%	intergenic (+44/‑502)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,752	G→A	10.7%	intergenic (+46/‑500)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,809	G→A	15.9%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,819	T→C	15.2%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,824	C→T	15.2%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,825	G→T	17.4%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,826	C→T	15.5%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,829	A→G	15.5%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,835	G→C	15.5%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,837	C→G	15.2%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,840	C→T	15.2%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,844	C→G	12.9%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,848	C→T	12.9%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,850	C→T	13.4%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,889	C→A	16.7%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,894	C→T	18.1%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,895	A→G	18.1%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,905	T→C	21.0%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,911	Δ1 bp	21.9%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,189:1	+G	7.4%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,194	Δ1 bp	7.3%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,001,315	T→C	5.6%	Y329C (TAC→TGC)	amaA ←	L‑pipecolate oxidase
RA	6,001,378	C→T	5.6%	R308Q (CGG→CAG)	amaA ←	L‑pipecolate oxidase
RA	6,004,987	T→G	10.5%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,004,994	G→C	10.5%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,004,997	A→T	10.0%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,000	G→C	11.8%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,007	C→A	10.0%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,013,836	G→A	12.7%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,838	A→G	13.3%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,845	G→C	12.9%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,846	T→G	22.7%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,847	C→T	14.9%	intergenic (+52/+58)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,852	A→G	14.2%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,853	C→A	16.7%	intergenic (+58/+52)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,854	G→C	17.1%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,861	C→T	13.9%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,863	T→C	14.1%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,885	T→C	100%	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,018,374	A→C	5.4%	Y276D (TAC→GAC)	dadX ←	alanine racemase
RA	6,019,083	G→C	7.0%	H39Q (CAC→CAG)	dadX ←	alanine racemase
RA	6,019,275	G→C	10.6%	intergenic (‑76/+69)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,019,279	A→C	10.4%	intergenic (‑80/+65)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,019,299	T→G	9.9%	intergenic (‑100/+45)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,023,159	G→A	7.7%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,226	G→T	8.7%	intergenic (+141/+3)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,030,348	T→A	5.8%	intergenic (+33/+34)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,350	C→A	7.0%	intergenic (+35/+32)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,030,354	T→G	5.9%	intergenic (+39/+28)	PP_5729 → / ← rpmG	hypothetical protein/50S ribosomal protein L33
RA	6,039,236	C→T	13.8%	intergenic (‑256/+38)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,240	G→T	14.3%	intergenic (‑260/+34)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,241	A→C	14.3%	intergenic (‑261/+33)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,245	A→G	14.3%	intergenic (‑265/+29)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,041,127	T→A	7.8%	Q17H (CAA→CAT)	PP_5293 ←	hypothetical protein
RA	6,041,133	G→A	7.5%	I15I (ATC→ATT)	PP_5293 ←	hypothetical protein
RA	6,041,137	T→C	7.7%	E14G (GAA→GGA)	PP_5293 ←	hypothetical protein
RA	6,041,354	A→G	7.4%	N190N (AAT→AAC)	rph ←	ribonuclease PH
RA	6,050,223	G→A	7.8%	G362D (GGT→GAT)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,050,226	T→C	8.0%	I363T (ATC→ACC)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,064,575	A→T	10.0%	intergenic (+16/+18)	ubiA → / ← PP_5319	4‑hydroxybenzoate octaprenyltransferase/hypothetical protein
RA	6,064,576	G→C	10.0%	intergenic (+17/+17)	ubiA → / ← PP_5319	4‑hydroxybenzoate octaprenyltransferase/hypothetical protein
RA	6,064,577	A→T	10.0%	intergenic (+18/+16)	ubiA → / ← PP_5319	4‑hydroxybenzoate octaprenyltransferase/hypothetical protein
RA	6,068,518	G→T	7.0%	E387D (GAG→GAT)	PP_5322 →	metal ion transporter
RA	6,068,520	G→C	7.0%	R388P (CGC→CCC)	PP_5322 →	metal ion transporter
RA	6,068,526	T→A	7.4%	L390Q (CTG→CAG)	PP_5322 →	metal ion transporter
RA	6,068,529	G→C	7.4%	G391A (GGT→GCT) ‡	PP_5322 →	metal ion transporter
RA	6,068,530	T→G	7.2%	G391G (GGT→GGG) ‡	PP_5322 →	metal ion transporter
RA	6,068,531	A→C	7.1%	I392L (ATC→CTC)	PP_5322 →	metal ion transporter
RA	6,071,280	G→A	7.9%	L100L (CTG→TTG)	phoU ←	phosphate transport‑associated protein
RA	6,071,883	C→G	9.8%	L214F (TTG→TTC)	pstB‑II ←	phosphate ABC transporter ATP‑binding protein
RA	6,076,565	C→A	6.3%	intergenic (‑4/+135)	PP_5328 ← / ← PP_5329	phosphate ABC transporter permease/phosphate ABC transporter substrate‑binding protein
RA	6,080,988	T→A	6.9%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,080,989	T→A	6.9%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,091,694	T→G	5.8%	L40R (CTG→CGG)	PP_5343 →	putative Transcriptional regulator
RA	6,091,697	C→A	5.8%	P41Q (CCG→CAG)	PP_5343 →	putative Transcriptional regulator
RA	6,101,827	T→A	7.8%	Y327N (TAC→AAC)	uvrD →	DNA‑dependent ATPase I/helicase II
RA	6,110,656	A→T	6.5%	L285Q (CTA→CAA)	PP_5361 ←	protein P47K
RA	6,137,485	T→A	5.9%	intergenic (+29/‑61)	PP_5733 → / → czcC	metal‑binding protein/CzcC family metal RND transporter outer membrane protein
RA	6,137,491	G→C	6.1%	intergenic (+35/‑55)	PP_5733 → / → czcC	metal‑binding protein/CzcC family metal RND transporter outer membrane protein
RA	6,137,497	T→A	5.9%	intergenic (+41/‑49)	PP_5733 → / → czcC	metal‑binding protein/CzcC family metal RND transporter outer membrane protein
RA	6,148,487	A→G	10.2%	intergenic (‑671/‑2503)	PP_5393 ← / → PP_5395	metal‑binding chaperone/hypothetical protein
RA	6,166,470	G→T	9.1%	intergenic (‑229/‑451)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,175,503	C→A	6.3%	R365L (CGC→CTC)	atpD ←	ATP synthase subunit beta

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2038207	2038381	175	16 [14]	[15] 16	[rffE]	[rffE]

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	80495 =	62 (1.270)	3 (0.070)	3/246	NT	5.4%	coding (110/558 nt)	tsaC	threonylcarbamoyl‑AMP synthase
	?	NC_002947	80536 =	46 (1.000)					coding (151/558 nt)	tsaC	threonylcarbamoyl‑AMP synthase
*	?	NC_002947	= 115374	56 (1.140)	3 (0.060)	3/248	NT	5.5%	coding (741/1080 nt)	PP_0109	membrane protein
	?	NC_002947	= 115409	51 (1.100)					coding (776/1080 nt)	PP_0109	membrane protein
*	?	NC_002947	= 116151	51 (1.040)	3 (0.060)	3/250	NT	5.9%	coding (454/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase
	?	NC_002947	= 116188	47 (1.010)					coding (491/894 nt)	PP_0110	CyoE‑like protoheme IX farnesyltransferase
*	?	NC_002947	= 143910	48 (0.980)	4 (0.090)	4/252	NT	7.7%	coding (360/471 nt)	PP_0136	hypothetical protein
	?	NC_002947	= 143966	50 (1.060)					coding (416/471 nt)	PP_0136	hypothetical protein
*	?	NC_002947	= 144237	46 (0.940)	6 (0.130)	4/244	NT	12.7%	intergenic (+216/‑530)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter
	?	NC_002947	= 144275	40 (0.880)					intergenic (+254/‑492)	PP_0136/gltP	hypothetical protein/glutamate/aspartate‑proton DAACS transporter
*	?	NC_002947	= 155882	55 (1.120)	4 (0.090)	4/248	NT	7.0%	coding (494/798 nt)	ygdQ	transport protein
	?	NC_002947	= 155906	54 (1.170)					coding (470/798 nt)	ygdQ	transport protein
*	?	NC_002947	= 156459	58 (1.190)	3 (0.060)	3/248	NT	5.6%	coding (1267/1308 nt)	citN	citrate transporter
	?	NC_002947	= 156485	46 (0.990)					coding (1241/1308 nt)	citN	citrate transporter
*	?	NC_002947	= 170079	56 (1.140)	4 (0.090)	4/244	NT	7.2%	coding (481/1221 nt)	PP_0159	family III CoA‑transferase
	?	NC_002947	= 170103	51 (1.120)					coding (505/1221 nt)	PP_0159	family III CoA‑transferase
*	?	NC_002947	= 174906	NA (NA)	13 (0.280)	11/252	NT	NA	noncoding (1704/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174936	NA (NA)					noncoding (1734/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	199997 =	41 (0.840)	7 (0.140)	6/260	NT	14.7%	coding (5503/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	207936 =	NA (NA)					coding (13442/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	242456 =	60 (1.230)	3 (0.070)	3/242	NT	5.7%	coding (166/507 nt)	PP_0190	disulfide bond formation protein B
	?	NC_002947	242550 =	43 (0.950)					coding (260/507 nt)	PP_0190	disulfide bond formation protein B
*	?	NC_002947	250227 =	47 (0.960)	3 (0.070)	3/242	NT	6.6%	coding (976/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	250271 =	42 (0.930)					coding (932/1347 nt)	nfeD	membrane bound peptidase NefD
*	?	NC_002947	278042 =	50 (1.020)	4 (0.090)	4/248	NT	8.1%	coding (464/1242 nt)	PP_0224	DszC family monooxygenase
	?	NC_002947	278087 =	44 (0.950)					coding (419/1242 nt)	PP_0224	DszC family monooxygenase
*	?	NC_002947	293833 =	60 (1.230)	3 (0.060)	3/254	NT	5.3%	coding (31/798 nt)	ssuC	aliphatic sulfonatesABC transporter permease
	?	NC_002947	293866 =	49 (1.030)					coding (64/798 nt)	ssuC	aliphatic sulfonatesABC transporter permease
*	?	NC_002947	= 306878	49 (1.000)	3 (0.060)	3/254	NT	6.8%	coding (793/900 nt)	hslO	molecular chaperone HslO
	?	NC_002947	= 306906	35 (0.740)					coding (821/900 nt)	hslO	molecular chaperone HslO
*	?	NC_002947	307756 =	47 (0.960)	3 (0.070)	3/246	NT	6.7%	intergenic (+771/‑1098)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein
	?	NC_002947	307795 =	39 (0.850)					intergenic (+810/‑1059)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein
*	?	NC_002947	314661 =	50 (1.020)	4 (0.090)	4/252	NT	8.5%	coding (57/567 nt)	nudE	ADP compounds hydrolase NudE
	?	NC_002947	314750 =	38 (0.810)					coding (146/567 nt)	nudE	ADP compounds hydrolase NudE
*	?	NC_002947	335567 =	28 (0.570)	3 (0.060)	3/250	NT	8.7%	intergenic (‑172/+32)	PP_0277/PP_5437	hypothetical protein/hypothetical protein
	?	NC_002947	335591 =	36 (0.770)					intergenic (‑196/+8)	PP_0277/PP_5437	hypothetical protein/hypothetical protein
*	?	NC_002947	= 354589	49 (1.000)	3 (0.060)	3/254	NT	6.2%	coding (583/846 nt)	cbcW	choline/betaine/carnitine ABC transporter permease
	?	NC_002947	= 354615	43 (0.910)					coding (557/846 nt)	cbcW	choline/betaine/carnitine ABC transporter permease
*	?	NC_002947	383102 =	39 (0.800)	3 (0.060)	3/254	NT	7.3%	coding (65/303 nt)	PP_0319	hypothetical protein
	?	NC_002947	383137 =	38 (0.800)					coding (100/303 nt)	PP_0319	hypothetical protein
*	?	NC_002947	392752 =	50 (1.020)	5 (0.100)	5/256	NT	8.9%	intergenic (+11/‑64)	soxA/soxG	sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma
	?	NC_002947	392785 =	54 (1.130)					intergenic (+44/‑31)	soxA/soxG	sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma
*	?	NC_002947	= 393176	54 (1.100)	3 (0.070)	3/246	NT	5.2%	coding (361/633 nt)	soxG	sarcosine oxidase subunit gamma
	?	NC_002947	= 393225	59 (1.290)					coding (410/633 nt)	soxG	sarcosine oxidase subunit gamma
*	?	NC_002947	= 404617	64 (1.310)	4 (0.090)	4/248	NT	6.5%	coding (1440/2691 nt)	PP_0337	sensory box protein
	?	NC_002947	= 404657	54 (1.170)					coding (1400/2691 nt)	PP_0337	sensory box protein
*	?	NC_002947	405087 =	55 (1.120)	3 (0.070)	3/246	NT	5.8%	coding (970/2691 nt)	PP_0337	sensory box protein
	?	NC_002947	405143 =	45 (0.980)					coding (914/2691 nt)	PP_0337	sensory box protein
*	?	NC_002947	= 426730	57 (1.170)	3 (0.060)	3/250	NT	5.6%	coding (1069/2433 nt)	PP_0350	ferrichrome‑iron receptor
	?	NC_002947	= 426754	46 (0.990)					coding (1045/2433 nt)	PP_0350	ferrichrome‑iron receptor
*	?	NC_002947	= 430291	54 (1.100)	4 (0.090)	4/250	NT	6.9%	coding (89/711 nt)	PP_0353	exonuclease
	?	NC_002947	= 430317	56 (1.200)					coding (63/711 nt)	PP_0353	exonuclease
*	?	NC_002947	= 455472	44 (0.900)	4 (0.090)	4/248	NT	8.0%	coding (1183/1839 nt)	PP_0375	prolyl oligopeptidase family protein
	?	NC_002947	= 455551	50 (1.080)					coding (1104/1839 nt)	PP_0375	prolyl oligopeptidase family protein
*	?	NC_002947	461126 =	65 (1.330)	6 (0.130)	6/248	NT	9.3%	coding (1339/2301 nt)	pqqF	coenzyme PQQ synthesis protein F
	?	NC_002947	461167 =	56 (1.210)					coding (1298/2301 nt)	pqqF	coenzyme PQQ synthesis protein F
*	?	NC_002947	= 497023	54 (1.100)	4 (0.090)	4/246	NT	6.5%	coding (895/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	= 497096	64 (1.390)					coding (968/2388 nt)	PP_0409	two‑component system sensor histidine kinase
*	?	NC_002947	511923 =	68 (1.390)	4 (0.090)	4/240	NT	6.3%	intergenic (+63/‑85)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	511963 =	56 (1.250)					intergenic (+103/‑45)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	= 526669	7 (0.140)	6 (0.130)	5/256	NT	13.1%	intergenic (+199/‑94)	PP_16SC/PP_23SC	16S ribosomal RNA/23S ribosomal RNA
	?	NC_002947	= 699718	73 (1.530)					intergenic (+111/‑133)	PP_t06/PP_23SD	tRNA‑Ala/23S ribosomal RNA
*	?	NC_002947	= 556294	69 (1.410)	9 (0.200)	8/242	NT	11.6%	coding (231/315 nt)	rplX	50S ribosomal protein L24
	?	NC_002947	= 556306	73 (1.620)					coding (243/315 nt)	rplX	50S ribosomal protein L24
*	?	NC_002947	= 578580	51 (1.040)	4 (0.090)	3/252	NT	7.6%	coding (549/951 nt)	fdoH	formate dehydrogenase‑O subunit beta
	?	NC_002947	= 578607	48 (1.020)					coding (576/951 nt)	fdoH	formate dehydrogenase‑O subunit beta
*	?	NC_002947	594783 =	58 (1.190)	5 (0.120)	4/232	NT	9.9%	intergenic (‑22/+105)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594844 =	40 (0.920)					intergenic (‑83/+44)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
*	?	NC_002947	611927 =	NA (NA)	11 (0.240)	9/244	NT	NA	coding (824/966 nt)	PP_0526	transposase
	?	NC_002947	611970 =	NA (NA)					coding (867/966 nt)	PP_0526	transposase
*	?	NC_002947	= 612597	69 (1.410)	6 (0.130)	4/246	NT	8.7%	coding (1585/1896 nt)	dxs	1‑deoxyxylulose‑5‑phosphate synthase
	?	NC_002947	= 612624	61 (1.330)					coding (1558/1896 nt)	dxs	1‑deoxyxylulose‑5‑phosphate synthase
*	?	NC_002947	618313 =	56 (1.140)	3 (0.060)	3/248	NT	6.3%	coding (256/894 nt)	PP_0532	hypothetical protein
	?	NC_002947	618371 =	37 (0.800)					coding (198/894 nt)	PP_0532	hypothetical protein
*	?	NC_002947	= 628312	39 (0.800)	3 (0.060)	3/252	NT	6.6%	coding (483/819 nt)	eutC	ethanolamine ammonia‑lyase subunit beta
	?	NC_002947	= 628362	48 (1.020)					coding (433/819 nt)	eutC	ethanolamine ammonia‑lyase subunit beta
*	?	NC_002947	= 634613	75 (1.530)	4 (0.090)	4/246	NT	5.2%	coding (919/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 634660	76 (1.660)					coding (966/2016 nt)	PP_0546	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 660410	51 (1.040)	3 (0.070)	3/242	NT	5.7%	coding (1456/1914 nt)	speA	biosynthetic arginine decarboxylase
	?	NC_002947	= 660462	52 (1.150)					coding (1508/1914 nt)	speA	biosynthetic arginine decarboxylase
*	?	NC_002947	= 663244	56 (1.140)	3 (0.060)	3/248	NT	5.1%	coding (110/4902 nt)	yfhM	lipoprotein
	?	NC_002947	= 663347	59 (1.270)					coding (213/4902 nt)	yfhM	lipoprotein
*	?	NC_002947	667006 =	79 (1.610)	4 (0.090)	4/250	NT	5.1%	coding (3872/4902 nt)	yfhM	lipoprotein
	?	NC_002947	667041 =	72 (1.540)					coding (3907/4902 nt)	yfhM	lipoprotein
*	?	NC_002947	= 668081	34 (0.690)	3 (0.080)	3/214	NT	9.6%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668150	29 (0.730)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	678896 =	56 (1.140)	4 (0.090)	4/246	NT	6.6%	coding (122/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
	?	NC_002947	678933 =	61 (1.330)					coding (85/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
*	?	NC_002947	710462 =	39 (0.800)	6 (0.130)	5/252	NT	13.6%	coding (260/2832 nt)	ileS	isoleucine‑‑tRNA ligase
	?	NC_002947	710511 =	39 (0.830)					coding (309/2832 nt)	ileS	isoleucine‑‑tRNA ligase
*	?	NC_002947	722076 =	46 (0.940)	4 (0.090)	4/250	NT	9.4%	coding (674/753 nt)	PP_0616	ABC transporter ATP‑binding protein
	?	NC_002947	722166 =	33 (0.710)					coding (584/753 nt)	PP_0616	ABC transporter ATP‑binding protein
*	?	NC_002947	= 741869	NA (NA)	8 (0.170)	8/250	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741902	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742915 =	NA (NA)	8 (0.170)	8/250	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742945 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	746753 =	NA (NA)	6 (0.130)	4/246	NT	NA	coding (121/357 nt)	PP_0638	transposase
	?	NC_002947	746788 =	NA (NA)					coding (86/357 nt)	PP_0638	transposase
*	?	NC_002947	747103 =	53 (1.080)	3 (0.070)	3/246	NT	6.2%	intergenic (‑230/‑564)	PP_0638/PP_5448	transposase/hypothetical protein
	?	NC_002947	747144 =	41 (0.890)					intergenic (‑271/‑523)	PP_0638/PP_5448	transposase/hypothetical protein
*	?	NC_002947	= 806097	45 (0.920)	3 (0.060)	3/252	NT	6.6%	coding (1233/2832 nt)	PP_0693	hypothetical protein
	?	NC_002947	= 806113	42 (0.890)					coding (1217/2832 nt)	PP_0693	hypothetical protein
*	?	NC_002947	824759 =	57 (1.170)	4 (0.090)	4/250	NT	6.6%	coding (1358/1500 nt)	PP_0709	NCS1 family transporter
	?	NC_002947	824799 =	58 (1.240)					coding (1318/1500 nt)	PP_0709	NCS1 family transporter
*	?	NC_002947	= 833024	49 (1.000)	3 (0.060)	3/250	NT	6.0%	coding (787/1098 nt)	PP_0716	HlyD family secretion protein
	?	NC_002947	= 833048	48 (1.030)					coding (811/1098 nt)	PP_0716	HlyD family secretion protein
*	?	NC_002947	= 866931	57 (1.170)	6 (0.130)	6/250	NT	10.0%	coding (384/474 nt)	PP_0748	hypothetical protein
	?	NC_002947	= 866949	54 (1.160)					coding (402/474 nt)	PP_0748	hypothetical protein
*	?	NC_002947	867920 =	39 (0.800)	4 (0.090)	4/236	NT	8.8%	intergenic (+18/+159)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868010 =	48 (1.090)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	= 872990	53 (1.080)	3 (0.060)	3/248	NT	5.9%	coding (172/1272 nt)	PP_0756	hypothetical protein
	?	NC_002947	= 873014	46 (0.990)					coding (148/1272 nt)	PP_0756	hypothetical protein
*	?	NC_002947	883223 =	55 (1.120)	4 (0.090)	4/250	NT	7.7%	coding (826/1365 nt)	PP_0766	hypothetical protein
	?	NC_002947	883266 =	43 (0.920)					coding (869/1365 nt)	PP_0766	hypothetical protein
*	?	NC_002947	892009 =	51 (1.040)	4 (0.080)	4/256	NT	6.8%	coding (1706/2088 nt)	pta	phosphate acetyltransferase
	?	NC_002947	892050 =	59 (1.230)					coding (1665/2088 nt)	pta	phosphate acetyltransferase
*	?	NC_002947	= 896940	39 (0.800)	4 (0.090)	4/248	NT	9.7%	coding (372/1341 nt)	PP_0779	methyl‑accepting chemotaxis transducer/sensory box protein
	?	NC_002947	= 896963	38 (0.820)					coding (395/1341 nt)	PP_0779	methyl‑accepting chemotaxis transducer/sensory box protein
*	?	NC_002947	901659 =	54 (1.100)	3 (0.060)	3/248	NT	5.6%	coding (48/963 nt)	trxB	thioredoxin reductase
	?	NC_002947	901724 =	50 (1.080)					coding (113/963 nt)	trxB	thioredoxin reductase
*	?	NC_002947	916036 =	52 (1.060)	4 (0.080)	4/256	NT	6.8%	coding (497/540 nt)	PP_0797	hypothetical protein
	?	NC_002947	916126 =	58 (1.210)					coding (1441/1491 nt)	PP_0798	GGDEF domain‑containing protein
*	?	NC_002947	= 924621	46 (0.940)	3 (0.060)	3/252	NT	6.0%	coding (572/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 924633	50 (1.060)					coding (560/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein
*	?	NC_002947	= 929677	61 (1.250)	4 (0.080)	4/254	NT	6.4%	coding (15945/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 929780	58 (1.220)					coding (15842/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 939586	43 (0.880)	3 (0.060)	3/248	NT	6.5%	coding (6036/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 939632	45 (0.970)					coding (5990/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 943237	50 (1.020)	4 (0.090)	4/248	NT	7.6%	coding (2385/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 943304	50 (1.080)					coding (2318/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	961109 =	62 (1.270)	4 (0.090)	4/252	NT	6.2%	coding (272/1113 nt)	selU	tRNA 2‑selenouridine synthase
	?	NC_002947	961154 =	62 (1.320)					coding (227/1113 nt)	selU	tRNA 2‑selenouridine synthase
*	?	NC_002947	= 991688	52 (1.060)	3 (0.070)	3/246	NT	5.4%	coding (310/1464 nt)	der	GTPase Der
	?	NC_002947	= 991712	56 (1.220)					coding (334/1464 nt)	der	GTPase Der
*	?	NC_002947	= 996212	54 (1.100)	5 (0.110)	5/244	NT	8.8%	coding (1384/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	= 996255	53 (1.160)					coding (1341/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
*	?	NC_002947	= 1004713	44 (0.900)	4 (0.090)	4/250	NT	8.2%	coding (738/987 nt)	PP_0866	transmembrane sensor
	?	NC_002947	= 1004745	48 (1.030)					coding (770/987 nt)	PP_0866	transmembrane sensor
*	?	NC_002947	= 1011458	43 (0.880)	5 (0.110)	4/250	NT	9.7%	intergenic (‑396/‑131)	PP_0871/prfC	glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3
	?	NC_002947	= 1011497	52 (1.110)					intergenic (‑435/‑92)	PP_0871/prfC	glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3
*	?	NC_002947	= 1015201	54 (1.100)	3 (0.070)	3/246	NT	6.0%	coding (1040/1431 nt)	PP_0875	hypothetical protein
	?	NC_002947	= 1015224	43 (0.940)					coding (1017/1431 nt)	PP_0875	hypothetical protein
*	?	NC_002947	= 1016398	37 (0.760)	3 (0.060)	3/248	NT	7.5%	coding (708/825 nt)	PP_0876	AraC family transcriptional regulator
	?	NC_002947	= 1016433	39 (0.840)					coding (673/825 nt)	PP_0876	AraC family transcriptional regulator
*	?	NC_002947	= 1023732	51 (1.040)	6 (0.130)	6/252	NT	10.3%	intergenic (‑20/+35)	dppA‑I/opdP	dipeptide ABC transporter substrate‑binding protein/glycine‑glutamate dipeptide porin
	?	NC_002947	= 1023754	55 (1.170)					intergenic (‑42/+13)	dppA‑I/opdP	dipeptide ABC transporter substrate‑binding protein/glycine‑glutamate dipeptide porin
*	?	NC_002947	= 1025257	37 (0.760)	4 (0.080)	4/256	NT	9.3%	intergenic (‑111/+118)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025369	42 (0.880)					intergenic (‑223/+6)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1026771 =	65 (1.330)	4 (0.090)	4/252	NT	6.1%	coding (197/1593 nt)	dppA‑II	dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1026798 =	60 (1.280)					coding (170/1593 nt)	dppA‑II	dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1047955	47 (0.960)	3 (0.060)	3/248	NT	6.1%	coding (423/3045 nt)	PP_0906	RND family multidrug transporter
	?	NC_002947	= 1047980	48 (1.040)					coding (398/3045 nt)	PP_0906	RND family multidrug transporter
*	?	NC_002947	1062897 =	49 (1.000)	4 (0.090)	4/250	NT	8.3%	coding (992/1050 nt)	xenB	xenobiotic reductase B
	?	NC_002947	1062966 =	42 (0.900)					coding (923/1050 nt)	xenB	xenobiotic reductase B
*	?	NC_002947	= 1098363	44 (0.900)	4 (0.090)	4/252	NT	7.9%	coding (216/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_002947	= 1098419	51 (1.080)					coding (160/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
*	?	NC_002947	1114870 =	62 (1.270)	4 (0.100)	4/212	NT	7.9%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114946 =	43 (1.090)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	= 1167535	43 (0.880)	3 (0.070)	3/246	NT	6.6%	coding (479/729 nt)	pgl	6‑phosphogluconolactonase
	?	NC_002947	= 1167560	44 (0.960)					coding (504/729 nt)	pgl	6‑phosphogluconolactonase
*	?	NC_002947	= 1183002	50 (1.020)	4 (0.090)	3/248	NT	7.7%	coding (1383/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
	?	NC_002947	= 1183025	48 (1.040)					coding (1360/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
*	?	NC_002947	= 1190854	44 (0.900)	4 (0.090)	4/252	NT	7.9%	coding (376/966 nt)	xcpX	type II secretion system protein K
	?	NC_002947	= 1190882	51 (1.080)					coding (404/966 nt)	xcpX	type II secretion system protein K
*	?	NC_002947	1201733 =	52 (1.060)	3 (0.060)	3/250	NT	5.6%	coding (137/591 nt)	xcpW	type II secretion pathway protein XcpW
	?	NC_002947	1201760 =	52 (1.110)					coding (164/591 nt)	xcpW	type II secretion pathway protein XcpW
*	?	NC_002947	= 1260815	40 (0.820)	4 (0.090)	4/246	NT	9.1%	coding (636/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase
	?	NC_002947	= 1260846	42 (0.910)					coding (605/2451 nt)	PP_1103	DEAD box family ATP‑dependent helicase
*	?	NC_002947	1296784 =	NA (NA)	6 (0.130)	5/248	NT	NA	intergenic (‑537/‑29)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296822 =	NA (NA)					coding (10/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1296790	NA (NA)	5 (0.110)	4/248	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296814	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	1310927 =	51 (1.040)	3 (0.060)	3/250	NT	6.3%	coding (606/2265 nt)	PP_1144	membrane protein
	?	NC_002947	1310961 =	40 (0.860)					coding (572/2265 nt)	PP_1144	membrane protein
*	?	NC_002947	1338743 =	57 (1.170)	3 (0.070)	3/244	NT	5.2%	coding (1459/2037 nt)	PP_1163	FAD‑binding oxidoreductase
	?	NC_002947	1338789 =	56 (1.230)					coding (1505/2037 nt)	PP_1163	FAD‑binding oxidoreductase
*	?	NC_002947	1341964 =	58 (1.190)	4 (0.090)	4/252	NT	5.8%	coding (253/924 nt)	PP_1166	DMT superfamily permease
	?	NC_002947	1342041 =	73 (1.550)					coding (176/924 nt)	PP_1166	DMT superfamily permease
*	?	NC_002947	= 1354380	54 (1.100)	3 (0.070)	3/246	NT	5.4%	coding (997/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
	?	NC_002947	= 1354407	54 (1.180)					coding (970/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
*	?	NC_002947	= 1356460	53 (1.080)	3 (0.070)	3/244	NT	5.7%	coding (336/699 nt)	PP_1181	two‑component system response regulator
	?	NC_002947	= 1356504	50 (1.100)					coding (380/699 nt)	PP_1181	two‑component system response regulator
*	?	NC_002947	= 1358040	68 (1.390)	4 (0.090)	4/248	NT	5.7%	coding (1221/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1358084	67 (1.450)					coding (1265/1608 nt)	PP_1182	sensor histidine kinase
*	?	NC_002947	= 1364739	61 (1.250)	4 (0.080) +C	4/260	NT	6.5%	intergenic (+109/+40)	dctA‑I/PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
	?	NC_002947	6052500 =	55 (1.120)					intergenic (+61/+109)	PP_5304/PP_5305	lipoprotein/epimerase/dehydratase‑like protein
*	?	NC_002947	= 1375310	58 (1.190)	4 (0.080)	3/254	NT	7.0%	coding (930/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375342	50 (1.050)					coding (962/1911 nt)	kup	potassium transport system protein Kup
*	?	NC_002947	1380487 =	33 (0.670)	9 (0.200)	7/238	NT	26.5%	intergenic (‑213/+49)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380526 =	20 (0.450)					intergenic (‑252/+10)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
*	?	NC_002947	1386117 =	53 (1.080)	3 (0.060)	3/250	NT	6.0%	coding (340/1266 nt)	oprD	basic amino acid specific porin OprD
	?	NC_002947	1386160 =	44 (0.940)					coding (297/1266 nt)	oprD	basic amino acid specific porin OprD
*	?	NC_002947	1419133 =	28 (0.570)	3 (0.070)	3/246	NT	12.2%	intergenic (‑251/+106)	PP_1241/PP_1242	hypothetical protein/hypothetical protein
	?	NC_002947	1419186 =	17 (0.370)					intergenic (‑304/+53)	PP_1241/PP_1242	hypothetical protein/hypothetical protein
*	?	NC_002947	1447785 =	63 (1.290)	5 (0.110)	5/252	NT	7.3%	coding (1883/2178 nt)	PP_1264	fusaric acid resistance protein
	?	NC_002947	1447829 =	67 (1.420)					coding (1927/2178 nt)	PP_1264	fusaric acid resistance protein
*	?	NC_002947	= 1467322	54 (1.100)	3 (0.060)	3/254	NT	5.4%	coding (1370/1479 nt)	algE	alginate production protein AlgE
	?	NC_002947	= 1467356	52 (1.100)					coding (1336/1479 nt)	algE	alginate production protein AlgE
*	?	NC_002947	= 1485867	47 (0.960)	3 (0.070)	3/244	NT	6.6%	coding (756/1098 nt)	yhdY	amino acid ABC transporter permease
	?	NC_002947	= 1485897	41 (0.900)					coding (786/1098 nt)	yhdY	amino acid ABC transporter permease
*	?	NC_002947	1487006 =	44 (0.900)	7 (0.190)	7/202	NT	20.3%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487096 =	21 (0.560)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1548872	50 (1.020)	4 (0.090)	4/250	NT	7.9%	coding (319/462 nt)	PP_1359	membrane protein
	?	NC_002947	= 1548903	45 (0.960)					coding (350/462 nt)	PP_1359	membrane protein
*	?	NC_002947	= 1575286	53 (1.080)	3 (0.060)	3/250	NT	5.3%	coding (1195/1257 nt)	galP‑II	porin‑like protein
	?	NC_002947	= 1575314	56 (1.200)					coding (1167/1257 nt)	galP‑II	porin‑like protein
*	?	NC_002947	1578505 =	56 (1.140)	3 (0.060)	3/254	NT	5.4%	coding (2892/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1578560 =	50 (1.050)					coding (2837/3153 nt)	ttgB	efflux pump membrane protein TtgB
*	?	NC_002947	1600146 =	61 (1.250)	4 (0.090)	4/248	NT	7.1%	coding (1038/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	1600188 =	47 (1.020)					coding (996/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
*	?	NC_002947	= 1600461	55 (1.120)	5 (0.110)	5/252	NT	9.0%	coding (723/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	= 1600481	48 (1.020)					coding (703/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
*	?	NC_002947	1643956 =	47 (0.960)	5 (0.100)	5/256	NT	9.8%	coding (786/2418 nt)	lon‑I	DNA‑binding ATP‑dependent protease
	?	NC_002947	1644028 =	46 (0.960)					coding (714/2418 nt)	lon‑I	DNA‑binding ATP‑dependent protease
*	?	NC_002947	1689328 =	56 (1.140)	4 (0.090)	4/248	NT	6.9%	coding (209/1032 nt)	ydcT	polyamine ABC transporter ATP‑binding protein
	?	NC_002947	1689368 =	55 (1.190)					coding (169/1032 nt)	ydcT	polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 1697830	59 (1.210)	6 (0.130)	5/248	NT	9.7%	coding (1863/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 1697863	56 (1.210)					coding (1896/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 1710487	41 (0.840)	3 (0.060)	3/252	NT	6.9%	coding (1106/2628 nt)	ppc	phosphoenolpyruvate carboxylase
	?	NC_002947	= 1710525	41 (0.870)					coding (1144/2628 nt)	ppc	phosphoenolpyruvate carboxylase
*	?	NC_002947	1724877 =	63 (1.290)	4 (0.090)	4/252	NT	5.9%	coding (292/687 nt)	PP_1518	hypothetical protein
	?	NC_002947	1724925 =	66 (1.400)					coding (244/687 nt)	PP_1518	hypothetical protein
*	?	NC_002947	= 1744020	52 (1.060)	3 (0.060)	3/248	NT	6.0%	coding (192/921 nt)	PP_1541	putative Methyltransferase
	?	NC_002947	= 1744048	45 (0.970)					coding (164/921 nt)	PP_1541	putative Methyltransferase
*	?	NC_002947	1784357 =	39 (0.800)	4 (0.090)	4/248	NT	9.9%	coding (544/783 nt)	map	methionine aminopeptidase
	?	NC_002947	1784402 =	36 (0.780)					coding (499/783 nt)	map	methionine aminopeptidase
*	?	NC_002947	= 1791893	45 (0.920)	3 (0.060)	3/252	NT	6.3%	coding (543/1359 nt)	rseP	regulatory intramembrane protein RIP
	?	NC_002947	= 1791932	46 (0.980)					coding (582/1359 nt)	rseP	regulatory intramembrane protein RIP
*	?	NC_002947	= 1795833	50 (1.020)	3 (0.060)	3/254	NT	5.7%	coding (141/1056 nt)	lpxD	UDP‑3‑O‑acylglucosamine N‑acyltransferase
	?	NC_002947	= 1795872	51 (1.080)					coding (180/1056 nt)	lpxD	UDP‑3‑O‑acylglucosamine N‑acyltransferase
*	?	NC_002947	1824801 =	34 (0.690)	4 (0.090)	4/246	NT	11.0%	coding (453/2574 nt)	mutS	DNA mismatch repair protein MutS
	?	NC_002947	1824867 =	33 (0.720)					coding (387/2574 nt)	mutS	DNA mismatch repair protein MutS
*	?	NC_002947	1844134 =	0 (0.000)	67 (1.420)	57/252	NT	69.4%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179376	59 (1.250)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844137	0 (0.000)	45 (0.950)	40/254	NT	67.2%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177702 =	44 (0.930)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	1855432 =	50 (1.020)	3 (0.070)	3/238	NT	6.8%	coding (444/1341 nt)	PP_1659	hypothetical protein
	?	NC_002947	1855485 =	37 (0.830)					coding (497/1341 nt)	PP_1659	hypothetical protein
*	?	NC_002947	= 1866624	39 (0.800)	3 (0.060)	3/248	NT	6.7%	coding (342/534 nt)	PP_1670	lipoprotein
	?	NC_002947	= 1866651	46 (0.990)					coding (369/534 nt)	PP_1670	lipoprotein
*	?	NC_002947	= 1885679	44 (0.900)	4 (0.090)	3/248	NT	8.5%	coding (346/1488 nt)	rmuC	DNA recombination limiting inversions protein
	?	NC_002947	= 1885705	45 (0.970)					coding (372/1488 nt)	rmuC	DNA recombination limiting inversions protein
*	?	NC_002947	= 1928975	60 (1.230)	3 (0.070)	3/244	NT	5.0%	coding (1117/2154 nt)	PP_1728	membrane protein
	?	NC_002947	= 1929003	57 (1.250)					coding (1089/2154 nt)	PP_1728	membrane protein
*	?	NC_002947	= 1930826	56 (1.140)	4 (0.090)	4/252	NT	6.7%	coding (902/1290 nt)	apeB	M18 family aminopeptidase
	?	NC_002947	= 1930870	57 (1.210)					coding (858/1290 nt)	apeB	M18 family aminopeptidase
*	?	NC_002947	1964521 =	44 (0.900)	4 (0.090)	4/244	NT	8.6%	coding (733/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
	?	NC_002947	1964562 =	44 (0.970)					coding (774/2526 nt)	yegE	phosphodiesterase domain‑containing diguanylate cyclase
*	?	NC_002947	= 1974048	42 (0.860)	3 (0.060)	3/254	NT	6.8%	coding (58/1086 nt)	serC	3‑phosphoserine/phosphohydroxythreonine aminotransferase
	?	NC_002947	= 1974073	42 (0.890)					coding (83/1086 nt)	serC	3‑phosphoserine/phosphohydroxythreonine aminotransferase
*	?	NC_002947	2018588 =	49 (1.000)	4 (0.090)	4/244	NT	9.1%	intergenic (‑2196/‑138)	PP_1795/PP_1797	hypothetical protein/HlyD family secretion protein
	?	NC_002947	2018627 =	34 (0.750)					intergenic (‑2235/‑99)	PP_1795/PP_1797	hypothetical protein/HlyD family secretion protein
*	?	NC_002947	= 2048810	37 (0.760)	4 (0.090)	3/228	NT	11.9%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048867	27 (0.630)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2049003 =	60 (1.230)	3 (0.060)	3/250	NT	5.3%	coding (269/372 nt)	PP_1822	hypothetical protein
	?	NC_002947	2049046 =	50 (1.070)					coding (226/372 nt)	PP_1822	hypothetical protein
*	?	NC_002947	= 2071806	47 (0.960)	3 (0.060)	3/248	NT	5.5%	coding (1602/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
	?	NC_002947	= 2071852	58 (1.250)					coding (1556/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
*	?	NC_002947	= 2086250	NA (NA)	5 (0.110)	4/246	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086296	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	2086546 =	NA (NA)	6 (0.130)	6/254	NT	NA	coding (661/1302 nt)	PP_1865	transposase
	?	NC_002947	2086577 =	NA (NA)					coding (692/1302 nt)	PP_1865	transposase
*	?	NC_002947	2131092 =	60 (1.230)	4 (0.090)	4/250	NT	6.1%	coding (1107/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2131132 =	65 (1.390)					coding (1067/2496 nt)	fimD	type I pili subunit FimD
*	?	NC_002947	= 2161750	33 (0.670)	6 (0.130)	6/252	NT	16.3%	coding (698/1266 nt)	yceG	septation protein
	?	NC_002947	= 2161779	30 (0.640)					coding (727/1266 nt)	yceG	septation protein
*	?	NC_002947	= 2258059	NA (NA)	5 (0.110)	4/246	NT	18.2%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258152	24 (0.490)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	2263994 =	50 (1.020)	5 (0.100)	5/262	NT	8.5%	intergenic (+166/‑57)	trpF/accD	N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta
	?	NC_002947	2264033 =	57 (1.170)					intergenic (+205/‑18)	trpF/accD	N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta
*	?	NC_002947	2270050 =	69 (1.410)	4 (0.090)	4/248	NT	5.7%	coding (853/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	2270106 =	66 (1.430)					coding (909/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
*	?	NC_002947	2295836 =	36 (0.740)	5 (0.110)	4/246	NT	11.9%	intergenic (+82/+51)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	4282152 =	40 (0.870)					coding (1078/1089 nt)	PP_3753	AraC family transcriptional regulator
*	?	NC_002947	2301453 =	0 (0.000)	43 (0.900)	38/256	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301454	0 (0.000)	31 (0.640)	29/258	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	2310524 =	64 (1.310)	5 (0.110)	5/242	NT	8.5%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310581 =	48 (1.060)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	2360109 =	44 (0.900)	5 (0.110)	5/252	NT	8.6%	coding (1048/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 3840158	64 (1.360)					coding (1081/1158 nt)	PP_3389	membrane protein
*	?	NC_002947	= 2367573	42 (0.860)	3 (0.060)	3/254	NT	7.3%	coding (391/4866 nt)	gdhB	NAD‑specific glutamate dehydrogenase
	?	NC_002947	= 2367638	35 (0.740)					coding (456/4866 nt)	gdhB	NAD‑specific glutamate dehydrogenase
*	?	NC_002947	= 2377876	52 (1.060)	3 (0.070)	3/246	NT	5.5%	coding (517/999 nt)	cmaX	protein CmaX
	?	NC_002947	= 2377901	54 (1.180)					coding (542/999 nt)	cmaX	protein CmaX
*	?	NC_002947	2378934 =	44 (0.900)	4 (0.090)	4/252	NT	9.1%	coding (214/825 nt)	cmpX	protein CmpX
	?	NC_002947	2378967 =	38 (0.810)					coding (247/825 nt)	cmpX	protein CmpX
*	?	NC_002947	2382955 =	36 (0.740)	3 (0.070)	3/246	NT	8.6%	coding (942/1671 nt)	PP_2091	serine/threonine‑protein kinase
	?	NC_002947	2382997 =	30 (0.650)					coding (900/1671 nt)	PP_2091	serine/threonine‑protein kinase
*	?	NC_002947	2404543 =	66 (1.350)	4 (0.080)	3/254	NT	6.2%	coding (1170/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2404578 =	58 (1.220)					coding (1205/1209 nt)	PP_2106	ammonium transporter
*	?	NC_002947	2414822 =	38 (0.780)	9 (0.190)	5/258	NT	19.4%	coding (20/198 nt)	PP_2115	hypothetical protein
	?	NC_002947	= 4908082	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	2422944 =	56 (1.140)	3 (0.060)	3/252	NT	5.2%	coding (1232/1248 nt)	PP_2124	glycosyl transferase
	?	NC_002947	2422993 =	55 (1.170)					coding (1183/1248 nt)	PP_2124	glycosyl transferase
*	?	NC_002947	= 2432060	32 (0.650)	3 (0.060)	3/252	NT	8.7%	intergenic (‑104/‑69)	PP_2130/uup	lytic transglycosylase/ABC transporter ATP‑binding protein
	?	NC_002947	= 2432095	32 (0.680)					intergenic (‑139/‑34)	PP_2130/uup	lytic transglycosylase/ABC transporter ATP‑binding protein
*	?	NC_002947	2442827 =	49 (1.000)	3 (0.060)	3/252	NT	5.5%	coding (1965/2610 nt)	topA	DNA topoisomerase I
	?	NC_002947	2442878 =	56 (1.190)					coding (2016/2610 nt)	topA	DNA topoisomerase I
*	?	NC_002947	2460048 =	55 (1.120)	5 (0.110)	5/252	NT	8.5%	coding (245/717 nt)	ugpQ	glycerophosphoryl diester phosphodiesterase
	?	NC_002947	2460096 =	55 (1.170)					coding (197/717 nt)	ugpQ	glycerophosphoryl diester phosphodiesterase
*	?	NC_002947	= 2473284	44 (0.900)	3 (0.060)	3/252	NT	6.2%	coding (812/1851 nt)	PP_2167	PhoD‑like phosphatase
	?	NC_002947	= 2473329	48 (1.020)					coding (767/1851 nt)	PP_2167	PhoD‑like phosphatase
*	?	NC_002947	2493059 =	36 (0.740)	4 (0.090)	3/248	NT	10.4%	coding (2482/2883 nt)	PP_2185	formate dehydrogenase subunit alpha
	?	NC_002947	2493110 =	35 (0.760)					coding (2533/2883 nt)	PP_2185	formate dehydrogenase subunit alpha
*	?	NC_002947	= 2528340	44 (0.900)	3 (0.060)	3/252	NT	6.2%	coding (241/774 nt)	PP_2217	enoyl‑CoA hydratase
	?	NC_002947	= 2528353	49 (1.040)					coding (254/774 nt)	PP_2217	enoyl‑CoA hydratase
*	?	NC_002947	= 2529310	NA (NA)	10 (0.210)	8/256	NT	53.2%	coding (31/1302 nt)	PP_2218	transposase
	?	NC_002947	= 2869389	9 (0.180)					intergenic (+928/‑3)	PP_2520/PP_2522	hypothetical protein/transposase
*	?	NC_002947	2555971 =	44 (0.900)	4 (0.090)	4/250	NT	8.4%	intergenic (+71/+140)	PP_2240/PP_2241	ABC transporter permease/ATP‑binding protein/MFS transporter
	?	NC_002947	2556059 =	45 (0.960)					intergenic (+159/+52)	PP_2240/PP_2241	ABC transporter permease/ATP‑binding protein/MFS transporter
*	?	NC_002947	= 2558125	40 (0.820)	5 (0.110)	5/250	NT	11.2%	coding (385/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
	?	NC_002947	= 2558149	41 (0.880)					coding (409/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
*	?	NC_002947	= 2563251	30 (0.610)	4 (0.090)	4/248	NT	10.2%	coding (989/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	= 2563333	42 (0.910)					coding (1071/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
*	?	NC_002947	2600997 =	53 (1.080)	4 (0.090)	4/246	NT	8.5%	coding (474/1575 nt)	PP_2279	head‑to‑tail joining protein
	?	NC_002947	2601059 =	36 (0.780)					coding (536/1575 nt)	PP_2279	head‑to‑tail joining protein
*	?	NC_002947	2653028 =	60 (1.230)	5 (0.110)	5/250	NT	7.9%	coding (415/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase
	?	NC_002947	2653071 =	60 (1.290)					coding (458/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase
*	?	NC_002947	2654023 =	48 (0.980)	4 (0.090)	4/246	NT	8.5%	coding (338/498 nt)	PP_2326	universal stress protein
	?	NC_002947	2654096 =	41 (0.890)					coding (411/498 nt)	PP_2326	universal stress protein
*	?	NC_002947	= 2678441	33 (0.670)	4 (0.090)	4/252	NT	9.0%	coding (782/1320 nt)	PP_2348	sensor histidine kinase
	?	NC_002947	= 2678519	49 (1.040)					coding (860/1320 nt)	PP_2348	sensor histidine kinase
*	?	NC_002947	2693981 =	53 (1.080)	3 (0.070)	3/246	NT	5.6%	coding (272/2394 nt)	PP_2362	usher protein
	?	NC_002947	2694052 =	51 (1.110)					coding (343/2394 nt)	PP_2362	usher protein
*	?	NC_002947	= 2718948	33 (0.670)	4 (0.090)	4/248	NT	10.5%	coding (75/585 nt)	nfuA	Fe/S biogenesis protein NfuA
	?	NC_002947	= 2718974	37 (0.800)					coding (101/585 nt)	nfuA	Fe/S biogenesis protein NfuA
*	?	NC_002947	= 2719155	38 (0.780)	3 (0.070)	3/246	NT	7.3%	coding (282/585 nt)	nfuA	Fe/S biogenesis protein NfuA
	?	NC_002947	= 2719178	41 (0.890)					coding (305/585 nt)	nfuA	Fe/S biogenesis protein NfuA
*	?	NC_002947	2751160 =	54 (1.100)	4 (0.090)	4/248	NT	7.8%	intergenic (‑225/‑14)	aroQ‑II/czcC‑II	type II 3‑dehydroquinate dehydratase/cobalt‑zinc‑cadmium resistance protein
	?	NC_002947	2751195 =	43 (0.930)					coding (22/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein
*	?	NC_002947	2775521 =	35 (0.720)	4 (0.090)	4/244	NT	10.1%	intergenic (‑10/‑133)	PP_5521/sotB	hypothetical protein/sugar efflux transporter
	?	NC_002947	2775581 =	39 (0.860)					intergenic (‑70/‑73)	PP_5521/sotB	hypothetical protein/sugar efflux transporter
*	?	NC_002947	2778759 =	29 (0.590)	3 (0.060)	3/256	NT	8.5%	coding (599/924 nt)	PP_2431	LysR family transcriptional regulator
	?	NC_002947	2778819 =	36 (0.750)					coding (539/924 nt)	PP_2431	LysR family transcriptional regulator
*	?	NC_002947	= 2794656	53 (1.080)	3 (0.060)	3/256	NT	5.5%	coding (499/735 nt)	PP_2447	hypothetical protein
	?	NC_002947	= 2794690	52 (1.090)					coding (533/735 nt)	PP_2447	hypothetical protein
*	?	NC_002947	= 2839904	61 (1.250)	3 (0.070)	3/246	NT	5.5%	coding (678/678 nt)	PP_2491	ThiJ/PfpI family protein
	?	NC_002947	= 2839944	45 (0.980)					coding (638/678 nt)	PP_2491	ThiJ/PfpI family protein
*	?	NC_002947	2849762 =	47 (0.960)	3 (0.060)	3/248	NT	6.5%	coding (334/927 nt)	PP_2502	LysR family transcriptional regulator
	?	NC_002947	2849836 =	42 (0.910)					coding (260/927 nt)	PP_2502	LysR family transcriptional regulator
*	?	NC_002947	2866692 =	37 (0.760)	5 (0.110)	3/248	NT	12.0%	coding (85/1263 nt)	glllA	gallate dioxygenase
	?	NC_002947	2866730 =	38 (0.820)					coding (47/1263 nt)	glllA	gallate dioxygenase
*	?	NC_002947	= 2881029	44 (0.900)	3 (0.070)	3/246	NT	7.4%	coding (871/1176 nt)	PP_2535	transport protein
	?	NC_002947	= 2881061	34 (0.740)					coding (903/1176 nt)	PP_2535	transport protein
*	?	NC_002947	2883870 =	39 (0.800)	3 (0.060)	3/248	NT	7.7%	coding (430/927 nt)	PP_2539	LysR family transcriptional regulator
	?	NC_002947	2883924 =	35 (0.760)					coding (484/927 nt)	PP_2539	LysR family transcriptional regulator
*	?	NC_002947	2912399 =	58 (1.190)	3 (0.070)	3/244	NT	5.7%	coding (1419/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	2912449 =	46 (1.010)					coding (1469/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	= 2927523	38 (0.780)	3 (0.060)	3/248	NT	7.4%	coding (790/2472 nt)	PP_2565	UvrD/REP family helicase
	?	NC_002947	= 2927554	39 (0.840)					coding (821/2472 nt)	PP_2565	UvrD/REP family helicase
*	?	NC_002947	2929376 =	41 (0.840)	5 (0.110)	5/250	NT	12.2%	coding (4726/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
	?	NC_002947	2929412 =	33 (0.710)					coding (4690/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
*	?	NC_002947	2987692 =	NA (NA)	5 (0.110)	5/254	NT	NA	coding (707/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987745 =	NA (NA)					coding (654/2991 nt)	PP_2612	membrane protein
*	?	NC_002947	3056145 =	32 (0.650)	6 (0.130)	6/256	NT	16.2%	coding (217/741 nt)	PP_2668	ABC transporter ATP‑binding protein
	?	NC_002947	3056203 =	31 (0.650)					coding (159/741 nt)	PP_2668	ABC transporter ATP‑binding protein
*	?	NC_002947	= 3135652	32 (0.650)	4 (0.090)	4/252	NT	12.0%	coding (305/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135680	28 (0.600)					coding (333/1335 nt)	PP_2752	hypothetical protein
*	?	NC_002947	= 3150028	41 (0.840)	3 (0.060)	3/254	NT	7.1%	coding (132/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150060	39 (0.820)					coding (164/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
*	?	NC_002947	= 3150435	41 (0.840)	4 (0.090)	4/252	NT	10.7%	coding (539/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150489	27 (0.570)					coding (593/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
*	?	NC_002947	= 3158691	25 (0.510)	3 (0.060)	3/248	NT	11.0%	coding (710/2097 nt)	opuA	glycine betaine ABC transporter ATP‑binding protein/permease
	?	NC_002947	= 3158757	25 (0.540)					coding (776/2097 nt)	opuA	glycine betaine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 3174337	51 (1.040)	3 (0.060)	3/250	NT	5.7%	coding (508/837 nt)	PP_2786	hypothetical protein
	?	NC_002947	= 3174361	50 (1.070)					coding (532/837 nt)	PP_2786	hypothetical protein
*	?	NC_002947	= 3191851	23 (0.470)	4 (0.090)	4/250	NT	12.7%	coding (148/1254 nt)	PP_2800	diaminobutyrate‑2‑oxoglutarate transaminase
	?	NC_002947	= 3191908	33 (0.710)					coding (91/1254 nt)	PP_2800	diaminobutyrate‑2‑oxoglutarate transaminase
*	?	NC_002947	3214112 =	49 (1.000)	4 (0.080)	4/254	NT	8.4%	coding (27/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3214140 =	40 (0.840)					coding (55/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	= 3221347	35 (0.720)	3 (0.060)	3/248	NT	8.6%	coding (1347/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 3221378	31 (0.670)					coding (1316/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 3238237	29 (0.590)	3 (0.060)	3/250	NT	8.9%	coding (676/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase
	?	NC_002947	= 3238258	34 (0.730)					coding (697/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase
*	?	NC_002947	= 3271443	43 (0.880)	5 (0.100)	5/260	NT	9.8%	coding (642/1953 nt)	PP_2869	FMN‑binding oxidoreductase
	?	NC_002947	= 3271466	49 (1.010)					coding (619/1953 nt)	PP_2869	FMN‑binding oxidoreductase
*	?	NC_002947	= 3279511	59 (1.210)	4 (0.090)	4/248	NT	8.5%	coding (569/594 nt)	PP_2879	hypothetical protein
	?	NC_002947	= 3279583	30 (0.650)					coding (497/594 nt)	PP_2879	hypothetical protein
*	?	NC_002947	3289791 =	52 (1.060)	3 (0.060)	3/248	NT	6.1%	coding (823/1752 nt)	PP_2892	hypothetical protein
	?	NC_002947	3289839 =	43 (0.930)					coding (871/1752 nt)	PP_2892	hypothetical protein
*	?	NC_002947	= 3323930	45 (0.920)	4 (0.090)	3/250	NT	9.0%	coding (1204/1251 nt)	PP_2924	hypothetical protein
	?	NC_002947	= 3323977	38 (0.810)					coding (1157/1251 nt)	PP_2924	hypothetical protein
*	?	NC_002947	= 3365539	72 (1.470)	4 (0.090)	4/250	NT	5.5%	coding (207/1002 nt)	PP_2962	alcohol dehydrogenase
	?	NC_002947	= 3365557	68 (1.460)					coding (225/1002 nt)	PP_2962	alcohol dehydrogenase
*	?	NC_002947	3423583 =	46 (0.940)	3 (0.060)	3/252	NT	6.2%	coding (1741/2211 nt)	PP_3038	TraC domain‑containing protein
	?	NC_002947	3423625 =	46 (0.980)					coding (1783/2211 nt)	PP_3038	TraC domain‑containing protein
*	?	NC_002947	3437048 =	56 (1.140)	3 (0.070)	3/242	NT	6.0%	coding (174/879 nt)	PP_3056	tail fiber protein
	?	NC_002947	3437092 =	42 (0.930)					coding (218/879 nt)	PP_3056	tail fiber protein
*	?	NC_002947	= 3437861	49 (1.000)	3 (0.070)	3/244	NT	6.1%	coding (102/741 nt)	PP_3057	pectinesterase
	?	NC_002947	= 3437912	47 (1.030)					coding (153/741 nt)	PP_3057	pectinesterase
*	?	NC_002947	3439660 =	50 (1.020)	3 (0.060)	3/248	NT	5.9%	coding (582/1167 nt)	PP_3059	tail sheath protein
	?	NC_002947	3439697 =	48 (1.040)					coding (619/1167 nt)	PP_3059	tail sheath protein
*	?	NC_002947	3444544 =	41 (0.840)	3 (0.060)	3/254	NT	7.3%	coding (24/846 nt)	gpU	tail formation protein
	?	NC_002947	3444599 =	37 (0.780)					coding (79/846 nt)	gpU	tail formation protein
*	?	NC_002947	3456775 =	38 (0.780)	4 (0.090)	3/252	NT	8.6%	coding (514/771 nt)	hbdH	3‑hydroxybutyrate dehydrogenase
	?	NC_002947	3456819 =	48 (1.020)					coding (470/771 nt)	hbdH	3‑hydroxybutyrate dehydrogenase
*	?	NC_002947	= 3479266	45 (0.920)	3 (0.060)	3/250	NT	6.3%	coding (1953/2496 nt)	PP_3090	OmpA domain‑containing protein
	?	NC_002947	= 3479310	47 (1.010)					coding (1909/2496 nt)	PP_3090	OmpA domain‑containing protein
*	?	NC_002947	= 3512284	59 (1.210)	3 (0.060)	3/254	NT	5.4%	coding (952/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	= 3512314	48 (1.010)					coding (982/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	= 3552623	45 (0.920)	4 (0.090)	4/252	NT	8.7%	coding (280/978 nt)	PP_3137	group 2 family glycosyl transferase
	?	NC_002947	= 3552650	41 (0.870)					coding (307/978 nt)	PP_3137	group 2 family glycosyl transferase
*	?	NC_002947	3555318 =	31 (0.630)	3 (0.060)	3/248	NT	9.2%	coding (934/1203 nt)	PP_3139	group 1 family glycosyl transferase
	?	NC_002947	3555365 =	30 (0.650)					coding (981/1203 nt)	PP_3139	group 1 family glycosyl transferase
*	?	NC_002947	= 3558296	26 (0.530)	4 (0.080)	4/256	NT	13.0%	coding (595/1422 nt)	PP_3142	sugar transferase
	?	NC_002947	= 3558333	28 (0.590)					coding (632/1422 nt)	PP_3142	sugar transferase
*	?	NC_002947	3586143 =	34 (0.690)	3 (0.060)	3/250	NT	8.3%	coding (337/1329 nt)	benK	benzoate MFS transporter
	?	NC_002947	3586190 =	34 (0.730)					coding (384/1329 nt)	benK	benzoate MFS transporter
*	?	NC_002947	= 3588116	34 (0.690)	4 (0.100)	4/222	NT	11.6%	intergenic (+37/‑38)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588144	32 (0.770)					intergenic (+65/‑10)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
*	?	NC_002947	= 3642292	42 (0.860)	3 (0.070)	3/246	NT	6.9%	coding (913/1431 nt)	PP_3209	isoxanthopterin deaminase
	?	NC_002947	= 3642312	41 (0.890)					coding (893/1431 nt)	PP_3209	isoxanthopterin deaminase
*	?	NC_002947	3649219 =	50 (1.020)	4 (0.090)	4/246	NT	8.3%	intergenic (+696/+995)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
	?	NC_002947	3649263 =	41 (0.890)					intergenic (+740/+951)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
*	?	NC_002947	3656110 =	37 (0.760)	4 (0.090)	4/246	NT	10.2%	coding (283/1620 nt)	PP_3220	ABC transporter ATP‑binding protein
	?	NC_002947	3656175 =	36 (0.780)					coding (218/1620 nt)	PP_3220	ABC transporter ATP‑binding protein
*	?	NC_002947	3668197 =	22 (0.450)	3 (0.060)	3/248	NT	11.8%	coding (490/1368 nt)	PP_3231	hypothetical protein
	?	NC_002947	3668239 =	24 (0.520)					coding (448/1368 nt)	PP_3231	hypothetical protein
*	?	NC_002947	= 3693334	49 (1.000)	3 (0.060)	3/250	NT	6.2%	coding (292/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
	?	NC_002947	= 3693379	44 (0.940)					coding (247/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
*	?	NC_002947	3710437 =	46 (0.940)	3 (0.060)	3/248	NT	6.4%	coding (509/534 nt)	paaD	1,2‑phenylacetyl‑CoA epoxidase subunit D
	?	NC_002947	3710487 =	44 (0.950)					coding (459/534 nt)	paaD	1,2‑phenylacetyl‑CoA epoxidase subunit D
*	?	NC_002947	3712391 =	44 (0.900)	4 (0.090)	4/250	NT	9.8%	coding (605/990 nt)	paaA	ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha
	?	NC_002947	3712443 =	32 (0.690)					coding (553/990 nt)	paaA	ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha
*	?	NC_002947	= 3714765	48 (0.980)	4 (0.090)	4/252	NT	7.6%	coding (1091/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
	?	NC_002947	= 3714854	51 (1.080)					coding (1002/1221 nt)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
*	?	NC_002947	= 3802681	42 (0.860)	4 (0.090)	4/248	NT	8.8%	coding (1236/3048 nt)	PP_3361	aminotransferase
	?	NC_002947	= 3802739	43 (0.930)					coding (1178/3048 nt)	PP_3361	aminotransferase
*	?	NC_002947	= 3861513	46 (0.940)	6 (0.130)	5/246	NT	12.1%	coding (436/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3861577	44 (0.960)					coding (500/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 3874651	42 (0.860)	3 (0.070)	3/244	NT	6.4%	coding (257/594 nt)	ltg	lytic transglycosylase
	?	NC_002947	= 3874720	49 (1.080)					coding (188/594 nt)	ltg	lytic transglycosylase
*	?	NC_002947	= 3877270	42 (0.860)	3 (0.060)	3/252	NT	6.7%	coding (359/1242 nt)	PP_3425	RND family transporter MFP subunit
	?	NC_002947	= 3877298	43 (0.910)					coding (387/1242 nt)	PP_3425	RND family transporter MFP subunit
*	?	NC_002947	= 3884913	54 (1.100)	4 (0.090)	4/248	NT	7.1%	coding (798/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	= 3884961	53 (1.150)					coding (846/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
*	?	NC_002947	= 3900284	30 (0.610)	6 (0.130)	4/246	NT	16.6%	coding (692/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 3900313	32 (0.700)					coding (721/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	3910391 =	52 (1.060)	3 (0.060)	3/250	NT	5.7%	coding (2340/2640 nt)	PP_3450	TPR repeat‑containing protein
	?	NC_002947	3910458 =	49 (1.050)					coding (2407/2640 nt)	PP_3450	TPR repeat‑containing protein
*	?	NC_002947	3910501 =	36 (0.740)	3 (0.060)	3/252	NT	7.7%	coding (2450/2640 nt)	PP_3450	TPR repeat‑containing protein
	?	NC_002947	3910541 =	37 (0.790)					coding (2490/2640 nt)	PP_3450	TPR repeat‑containing protein
*	?	NC_002947	= 3921612	34 (0.690)	4 (0.090)	4/246	NT	10.3%	coding (154/1689 nt)	acs	acyl‑CoA synthetase
	?	NC_002947	= 3921702	38 (0.830)					coding (64/1689 nt)	acs	acyl‑CoA synthetase
*	?	NC_002947	3926334 =	28 (0.570)	3 (0.060)	3/256	NT	9.6%	coding (157/1629 nt)	peaA	quinohemoprotein amine dehydrogenase subunit alpha
	?	NC_002947	3926390 =	29 (0.610)					coding (101/1629 nt)	peaA	quinohemoprotein amine dehydrogenase subunit alpha
*	?	NC_002947	= 3944230	36 (0.740)	3 (0.070)	3/246	NT	7.8%	coding (166/507 nt)	PP_5605	hypothetical protein
	?	NC_002947	= 3944282	37 (0.810)					coding (114/507 nt)	PP_5605	hypothetical protein
*	?	NC_002947	= 3948058	36 (0.740)	3 (0.070)	3/244	NT	7.4%	intergenic (‑10/+51)	PP_3483/PP_3484	type II secretion system protein/two‑component system response regulator
	?	NC_002947	= 3948073	42 (0.920)					intergenic (‑25/+36)	PP_3483/PP_3484	type II secretion system protein/two‑component system response regulator
*	?	NC_002947	= 3951097	13 (0.270)	6 (0.120)	5/260	NT	26.7%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3951157	20 (0.410)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	= 3967304	56 (1.140)	4 (0.080)	4/254	NT	7.3%	coding (1497/2001 nt)	ydcP	peptidase
	?	NC_002947	= 3967372	47 (0.990)					coding (1565/2001 nt)	ydcP	peptidase
*	?	NC_002947	= 3971327	NA (NA)	6 (0.130)	4/250	NT	NA	coding (1246/1536 nt)	PP_3501	transposase
	?	NC_002947	= 3971367	NA (NA)					coding (1286/1536 nt)	PP_3501	transposase
*	?	NC_002947	= 4017634	48 (0.980)	3 (0.060)	3/252	NT	6.5%	coding (69/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4017666	40 (0.850)					coding (101/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4022743 =	41 (0.840)	7 (0.150)	6/246	NT	15.3%	intergenic (‑438/+230)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
	?	NC_002947	4022835 =	39 (0.850)					intergenic (‑530/+138)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	= 4023466	38 (0.780)	4 (0.080)	4/256	NT	7.3%	coding (1043/1536 nt)	emrB	multidrug transporter permease
	?	NC_002947	= 4023571	64 (1.340)					coding (938/1536 nt)	emrB	multidrug transporter permease
*	?	NC_002947	= 4035906	60 (1.230)	4 (0.080)	4/254	NT	6.5%	coding (957/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 4035965	56 (1.180)					coding (1016/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
*	?	NC_002947	4055975 =	37 (0.760)	4 (0.090)	3/248	NT	9.4%	coding (1687/2406 nt)	PP_3575	ferric siderophore receptor
	?	NC_002947	4056014 =	42 (0.910)					coding (1648/2406 nt)	PP_3575	ferric siderophore receptor
*	?	NC_002947	= 4059281	38 (0.780)	4 (0.090)	4/240	NT	9.5%	coding (1618/1638 nt)	pgm	phosphoglucomutase
	?	NC_002947	= 4059323	41 (0.920)					coding (1576/1638 nt)	pgm	phosphoglucomutase
*	?	NC_002947	= 4095364	51 (1.040)	3 (0.060)	3/248	NT	6.0%	coding (120/765 nt)	PP_3603	GntR family transcriptional regulator
	?	NC_002947	= 4095423	45 (0.970)					coding (61/765 nt)	PP_3603	GntR family transcriptional regulator
*	?	NC_002947	= 4126610	35 (0.720)	3 (0.060)	3/250	NT	9.0%	coding (751/1344 nt)	opdT‑II	tyrosine‑specific outer membrane porin D
	?	NC_002947	= 4126636	27 (0.580)					coding (725/1344 nt)	opdT‑II	tyrosine‑specific outer membrane porin D
*	?	NC_002947	= 4131117	45 (0.920)	5 (0.110)	4/250	NT	9.9%	intergenic (+29/+83)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131165	48 (1.030)					intergenic (+77/+35)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	4211401 =	31 (0.630)	3 (0.070)	3/246	NT	10.0%	coding (91/366 nt)	PP_3693	transcriptional regulator MvaT
	?	NC_002947	4211445 =	25 (0.540)					coding (47/366 nt)	PP_3693	transcriptional regulator MvaT
*	?	NC_002947	= 4243539	44 (0.900)	3 (0.060)	3/248	NT	6.6%	coding (199/708 nt)	PP_3720	NAD(P)H quinone oxidoreductase
	?	NC_002947	= 4243563	43 (0.930)					coding (175/708 nt)	PP_3720	NAD(P)H quinone oxidoreductase
*	?	NC_002947	4251800 =	39 (0.800)	3 (0.070)	3/246	NT	7.9%	coding (233/795 nt)	PP_3726	enoyl‑CoA hydratase/isomerase family protein
	?	NC_002947	4251852 =	33 (0.720)					coding (181/795 nt)	PP_3726	enoyl‑CoA hydratase/isomerase family protein
*	?	NC_002947	= 4284715	32 (0.650)	3 (0.070)	3/244	NT	8.2%	coding (120/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
	?	NC_002947	= 4284742	37 (0.810)					coding (147/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
*	?	NC_002947	4342346 =	39 (0.800)	3 (0.070)	3/246	NT	8.2%	coding (55/810 nt)	PP_3816	polyamine ABC transporter permease
	?	NC_002947	4342387 =	31 (0.680)					coding (96/810 nt)	PP_3816	polyamine ABC transporter permease
*	?	NC_002947	4348206 =	NA (NA)	4 (0.090)	4/248	NT	NA	coding (430/1422 nt)	PP_3820	group II intron‑encoding maturase
	?	NC_002947	4392679 =	NA (NA)					coding (336/1422 nt)	PP_3868	group II intron‑encoding maturase
*	?	NC_002947	= 4362772	43 (0.880)	3 (0.060)	3/254	NT	6.8%	intergenic (‑293/‑143)	PP_5634/adhP	hypothetical protein/alcohol dehydrogenase
	?	NC_002947	= 4362806	41 (0.860)					intergenic (‑327/‑109)	PP_5634/adhP	hypothetical protein/alcohol dehydrogenase
*	?	NC_002947	= 4386246	42 (0.860)	3 (0.060)	3/250	NT	6.6%	coding (163/501 nt)	PP_3862	assembly protein
	?	NC_002947	= 4386266	45 (0.960)					coding (143/501 nt)	PP_3862	assembly protein
*	?	NC_002947	= 4441130	47 (0.960)	3 (0.070)	3/244	NT	6.3%	intergenic (+64/+108)	PP_3938/nicP‑II	hypothetical protein/porin‑like protein
	?	NC_002947	= 4441193	46 (1.010)					intergenic (+127/+45)	PP_3938/nicP‑II	hypothetical protein/porin‑like protein
*	?	NC_002947	= 4459136	29 (0.590)	3 (0.070)	3/244	NT	9.7%	coding (161/1455 nt)	trkH‑I	potassium transporter
	?	NC_002947	= 4459162	29 (0.640)					coding (187/1455 nt)	trkH‑I	potassium transporter
*	?	NC_002947	4480540 =	31 (0.630)	4 (0.080)	4/256	NT	11.5%	coding (409/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	4480597 =	31 (0.650)					coding (466/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	4511671 =	60 (1.230)	5 (0.110)	4/252	NT	8.6%	coding (118/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	4511692 =	48 (1.020)					coding (97/1326 nt)	rarA	DNA‑dependent ATPase
*	?	NC_002947	4523349 =	55 (1.120)	4 (0.080)	4/254	NT	7.1%	coding (1198/2226 nt)	idh	isocitrate dehydrogenase
	?	NC_002947	4523381 =	51 (1.080)					coding (1230/2226 nt)	idh	isocitrate dehydrogenase
*	?	NC_002947	4539726 =	46 (0.940)	8 (0.170)	6/252	NT	15.2%	coding (559/831 nt)	nudC	NADH pyrophosphatase
	?	NC_002947	4539780 =	45 (0.960)					coding (505/831 nt)	nudC	NADH pyrophosphatase
*	?	NC_002947	4570328 =	59 (1.210)	4 (0.090)	4/248	NT	7.6%	coding (192/2775 nt)	treY	maltooligosyl trehalose synthase
	?	NC_002947	4570366 =	42 (0.910)					coding (230/2775 nt)	treY	maltooligosyl trehalose synthase
*	?	NC_002947	4585056 =	47 (0.960)	3 (0.060)	3/252	NT	6.4%	coding (528/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	4585084 =	43 (0.910)					coding (500/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4586034 =	22 (0.450)	5 (0.120)	7/218	NT	26.8%	intergenic (+117/+98)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586105 =	9 (0.220)					intergenic (+188/+27)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4590013 =	43 (0.880)	3 (0.060)	3/250	NT	7.2%	coding (695/1608 nt)	mccB	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
	?	NC_002947	4590056 =	36 (0.770)					coding (738/1608 nt)	mccB	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
*	?	NC_002947	4594949 =	45 (0.920)	3 (0.060)	3/254	NT	6.2%	coding (165/300 nt)	PP_4069	hypothetical protein
	?	NC_002947	4594981 =	47 (0.990)					coding (197/300 nt)	PP_4069	hypothetical protein
*	?	NC_002947	4615591 =	NA (NA)	5 (0.110)	5/250	NT	15.3%	coding (1962/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	4615615 =	29 (0.590)					coding (1986/4593 nt)	PP_4085	rhs family protein
*	?	NC_002947	4635401 =	60 (1.230)	4 (0.090)	4/252	NT	6.6%	coding (355/639 nt)	uvrY	BarA/UvrY two‑componenent system response regulator
	?	NC_002947	4635439 =	55 (1.170)					coding (317/639 nt)	uvrY	BarA/UvrY two‑componenent system response regulator
*	?	NC_002947	= 4639237	42 (0.860)	3 (0.060)	3/250	NT	7.1%	coding (541/696 nt)	PP_4104	glutathione S‑transferase family protein
	?	NC_002947	= 4639263	38 (0.810)					coding (515/696 nt)	PP_4104	glutathione S‑transferase family protein
*	?	NC_002947	4642860 =	51 (1.040)	4 (0.090)	4/246	NT	8.3%	coding (803/897 nt)	PP_4107	LysR family transcriptional regulator
	?	NC_002947	4642900 =	41 (0.890)					coding (843/897 nt)	PP_4107	LysR family transcriptional regulator
*	?	NC_002947	4644332 =	51 (1.040)	7 (0.160)	7/242	NT	14.3%	coding (1199/1251 nt)	PP_4108	4‑aminobutyrate aminotransferase
	?	NC_002947	4644363 =	37 (0.820)					coding (1230/1251 nt)	PP_4108	4‑aminobutyrate aminotransferase
*	?	NC_002947	4647557 =	26 (0.530)	8 (0.230)	7/184	NT	30.1%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647665 =	19 (0.550)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4681743 =	59 (1.210)	4 (0.090)	4/252	NT	6.9%	coding (33/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
	?	NC_002947	4681829 =	52 (1.110)					coding (119/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
*	?	NC_002947	4683397 =	45 (0.920)	4 (0.090)	4/248	NT	8.5%	coding (36/1830 nt)	PP_4146	peptide ABC transporter substrate‑binding protein
	?	NC_002947	4683464 =	43 (0.930)					coding (103/1830 nt)	PP_4146	peptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 4738009	44 (0.900)	7 (0.150)	6/248	NT	14.8%	coding (361/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
	?	NC_002947	= 4738033	39 (0.840)					coding (337/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
*	?	NC_002947	4781897 =	57 (1.170)	3 (0.070)	3/244	NT	5.5%	coding (5417/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	4781947 =	50 (1.100)					coding (5367/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
*	?	NC_002947	4787374 =	43 (0.880)	4 (0.090)	4/250	NT	9.1%	coding (6466/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4787413 =	39 (0.840)					coding (6427/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4806164	36 (0.740)	4 (0.080)	4/254	NT	8.6%	coding (1728/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
	?	NC_002947	= 4806232	50 (1.050)					coding (1660/2832 nt)	PP_4234	bifunctional aldehyde oxidase/xanthine dehydrogenase
*	?	NC_002947	= 4808130	17 (0.350)	6 (0.130)	5/256	NT	15.5%	intergenic (‑239/‑316)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	5988748 =	49 (1.030)					intergenic (+42/‑504)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4808174 =	2 (0.040)	16 (0.450)	13/192	NT	55.7%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988935	24 (0.670)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4825060 =	54 (1.100)	3 (0.060)	3/250	NT	5.3%	coding (6130/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4825107 =	56 (1.200)					coding (6083/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4825882 =	46 (0.940)	3 (0.060)	3/252	NT	6.4%	coding (5308/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4825929 =	44 (0.940)					coding (5261/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4845323 =	50 (1.020)	3 (0.070)	3/246	NT	6.2%	coding (73/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
	?	NC_002947	4845374 =	44 (0.960)					coding (124/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
*	?	NC_002947	= 4860846	65 (1.330)	4 (0.090)	3/248	NT	6.3%	coding (204/2331 nt)	ligA	DNA ligase
	?	NC_002947	= 4860907	57 (1.230)					coding (143/2331 nt)	ligA	DNA ligase
*	?	NC_002947	4889569 =	70 (1.430)	7 (0.180)	4/208	NT	15.1%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4889660 =	23 (0.590)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	4898669 =	44 (0.900)	3 (0.060)	3/254	NT	6.4%	coding (800/924 nt)	PP_4307	DMT superfamily permease
	?	NC_002947	4898693 =	45 (0.950)					coding (776/924 nt)	PP_4307	DMT superfamily permease
*	?	NC_002947	= 4921664	42 (0.860)	5 (0.110)	4/250	NT	11.1%	coding (2073/2682 nt)	PP_4330	toxin‑like protein
	?	NC_002947	= 4921727	40 (0.860)					coding (2136/2682 nt)	PP_4330	toxin‑like protein
*	?	NC_002947	4953460 =	45 (0.920)	3 (0.070)	3/246	NT	7.0%	coding (972/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4953515 =	37 (0.810)					coding (917/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4956698 =	49 (1.000)	6 (0.130)	5/248	NT	11.8%	coding (57/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	4956743 =	43 (0.930)					coding (12/1374 nt) coding (775/792 nt)	fliI fliH	flagellum‑specific ATP synthase flagellar assembly protein FliH
*	?	NC_002947	4972591 =	53 (1.080)	5 (0.110)	5/252	NT	9.0%	coding (957/1566 nt)	flgL	flagellar hook‑associated protein FlgL
	?	NC_002947	4972629 =	50 (1.060)					coding (919/1566 nt)	flgL	flagellar hook‑associated protein FlgL
*	?	NC_002947	= 5040496	59 (1.210)	4 (0.090)	3/244	NT	6.7%	coding (8/1122 nt)	PP_4446	group II intron‑encoding maturase
	?	NC_002947	= 5040543	57 (1.250)					intergenic (‑40/‑81)	PP_4446/PP_5680	group II intron‑encoding maturase/Cro/CI family transcriptional regulator
*	?	NC_002947	5103399 =	45 (0.920)	3 (0.060)	3/256	NT	6.8%	intergenic (+13/‑376)	PP_5694/yhhS	hypothetical protein/carbohydrate efflux transporter
	?	NC_002947	5103457 =	38 (0.800)					intergenic (+71/‑318)	PP_5694/yhhS	hypothetical protein/carbohydrate efflux transporter
*	?	NC_002947	5197190 =	59 (1.210)	5 (0.110)	5/250	NT	8.5%	coding (98/777 nt)	PP_4577	hypothetical protein
	?	NC_002947	5197221 =	52 (1.110)					coding (67/777 nt)	PP_4577	hypothetical protein
*	?	NC_002947	5201579 =	37 (0.760)	4 (0.110)	4/188	NT	18.4%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201674 =	9 (0.260)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	5221665 =	62 (1.270)	4 (0.090)	4/248	NT	7.1%	coding (791/888 nt)	PP_4601	LysR family transcriptional regulator
	?	NC_002947	5221749 =	46 (0.990)					coding (875/888 nt)	PP_4601	LysR family transcriptional regulator
*	?	NC_002947	5248743 =	49 (1.000)	4 (0.090)	4/252	NT	6.6%	intergenic (‑83/+173)	PP_4623/PP_4624	hypothetical protein/alpha/beta family hydrolase
	?	NC_002947	5248789 =	66 (1.400)					intergenic (‑129/+127)	PP_4623/PP_4624	hypothetical protein/alpha/beta family hydrolase
*	?	NC_002947	5281862 =	48 (0.980)	5 (0.110)	5/248	NT	9.8%	coding (479/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta
	?	NC_002947	5281910 =	47 (1.020)					coding (431/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta
*	?	NC_002947	5323902 =	69 (1.410)	4 (0.090)	4/252	NT	5.7%	coding (536/1563 nt)	PP_4684	kinase‑like domain‑containing protein
	?	NC_002947	5323957 =	67 (1.420)					coding (591/1563 nt)	PP_4684	kinase‑like domain‑containing protein
*	?	NC_002947	5327969 =	58 (1.190)	4 (0.090)	4/248	NT	7.4%	coding (370/1038 nt)	PP_4688	heme/hemin ABC transporter permease
	?	NC_002947	5328031 =	45 (0.970)					coding (308/1038 nt)	PP_4688	heme/hemin ABC transporter permease
*	?	NC_002947	5342241 =	59 (1.210)	4 (0.090)	4/252	NT	7.6%	coding (551/864 nt)	panC	pantothenate synthetase
	?	NC_002947	5342276 =	40 (0.850)					coding (586/864 nt)	panC	pantothenate synthetase
*	?	NC_002947	5362551 =	70 (1.430)	4 (0.090)	4/246	NT	5.6%	coding (1215/1341 nt)	glmM	phosphoglucosamine mutase
	?	NC_002947	5362607 =	68 (1.480)					coding (1159/1341 nt)	glmM	phosphoglucosamine mutase
*	?	NC_002947	= 5370951	43 (0.880)	3 (0.060)	3/252	NT	6.2%	coding (986/3231 nt)	carB	carbamoyl‑phosphate synthase large subunit
	?	NC_002947	= 5370984	50 (1.060)					coding (953/3231 nt)	carB	carbamoyl‑phosphate synthase large subunit
*	?	NC_002947	= 5381355	50 (1.020)	3 (0.060)	3/252	NT	5.5%	coding (494/549 nt)	PP_4732	hypothetical protein
	?	NC_002947	= 5381397	56 (1.190)					coding (452/549 nt)	PP_4732	hypothetical protein
*	?	NC_002947	5390374 =	43 (0.880)	3 (0.060)	3/256	NT	7.0%	intergenic (+463/‑259)	PP_4738/PP_mr56	hypothetical protein/C4 ncRNA
	?	NC_002947	5390410 =	38 (0.800)					intergenic (+499/‑223)	PP_4738/PP_mr56	hypothetical protein/C4 ncRNA
*	?	NC_002947	5432710 =	52 (1.060)	3 (0.060)	3/254	NT	5.1%	intergenic (+45/+25)	PP_5713/hrpB	hypothetical protein/ATP‑dependent helicase HrpB
	?	NC_002947	5432794 =	62 (1.310)					coding (2470/2529 nt)	hrpB	ATP‑dependent helicase HrpB
*	?	NC_002947	5460560 =	55 (1.120)	3 (0.060)	3/254	NT	5.5%	coding (979/1038 nt)	holA	DNA polymerase III subunit delta
	?	NC_002947	5460605 =	50 (1.050)					coding (1024/1038 nt)	holA	DNA polymerase III subunit delta
*	?	NC_002947	= 5467023	61 (1.250)	3 (0.060)	3/250	NT	5.0%	coding (823/1002 nt)	rlpA	RlpA‑like lipoprotein
	?	NC_002947	= 5467053	55 (1.180)					coding (793/1002 nt)	rlpA	RlpA‑like lipoprotein
*	?	NC_002947	= 5471251	50 (1.020)	4 (0.090)	3/248	NT	7.5%	coding (654/1890 nt)	mrdA‑II	transpeptidase
	?	NC_002947	= 5471303	51 (1.100)					coding (602/1890 nt)	mrdA‑II	transpeptidase
*	?	NC_002947	5474944 =	49 (1.000)	4 (0.090)	4/244	NT	8.3%	intergenic (‑150/‑156)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
	?	NC_002947	5475014 =	43 (0.940)					intergenic (‑220/‑86)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
*	?	NC_002947	= 5475848	50 (1.020)	6 (0.130)	5/254	NT	10.2%	coding (78/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
	?	NC_002947	= 5475892	57 (1.200)					coding (122/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
*	?	NC_002947	5482155 =	60 (1.230)	3 (0.060)	3/250	NT	5.2%	coding (81/1014 nt)	dusB	tRNA dihydrouridine synthase DusB
	?	NC_002947	5482205 =	52 (1.110)					coding (131/1014 nt)	dusB	tRNA dihydrouridine synthase DusB
*	?	NC_002947	= 5482808	61 (1.250)	4 (0.080)	4/254	NT	6.1%	coding (734/1014 nt)	dusB	tRNA dihydrouridine synthase DusB
	?	NC_002947	= 5482831	63 (1.330)					coding (757/1014 nt)	dusB	tRNA dihydrouridine synthase DusB
*	?	NC_002947	5484549 =	55 (1.120)	4 (0.090)	4/244	NT	7.7%	coding (1063/1608 nt)	purH	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
	?	NC_002947	5484663 =	45 (0.990)					coding (1177/1608 nt)	purH	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
*	?	NC_002947	5510345 =	52 (1.060)	4 (0.090)	4/252	NT	7.7%	coding (544/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	5510420 =	46 (0.980)					coding (619/1488 nt)	urtB	urea ABC transporter permease
*	?	NC_002947	5534108 =	63 (1.290)	3 (0.060)	3/252	NT	5.2%	coding (367/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5534150 =	48 (1.020)					coding (325/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	5545321 =	NA (NA)	67 (1.390)	60/258	NT	100%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	0 (0.000)					coding (19/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	= 5545666	NA (NA)	36 (0.750)	36/256	NT	100%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	0 (0.000)					coding (20/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	= 5550287	60 (1.230)	5 (0.110)	4/248	NT	8.4%	coding (529/1014 nt)	PP_4881	iron ABC transporter substrate‑binding protein
	?	NC_002947	= 5550336	52 (1.120)					coding (578/1014 nt)	PP_4881	iron ABC transporter substrate‑binding protein
*	?	NC_002947	= 5555208	62 (1.270)	4 (0.090)	4/244	NT	6.1%	coding (317/459 nt)	PP_4887	hypothetical protein
	?	NC_002947	= 5555253	65 (1.430)					coding (272/459 nt)	PP_4887	hypothetical protein
*	?	NC_002947	= 5574364	65 (1.330)	4 (0.090)	4/252	NT	5.9%	coding (930/1041 nt)	motB	flagellar motor rotation protein
	?	NC_002947	= 5574393	64 (1.360)					coding (901/1041 nt)	motB	flagellar motor rotation protein
*	?	NC_002947	= 5594119	23 (0.470)	6 (0.160)	5/206	NT	20.0%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594156	30 (0.780)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	5599510 =	42 (0.860)	4 (0.090)	4/250	NT	8.4%	coding (3972/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	5599554 =	47 (1.010)					coding (3928/5418 nt)	PP_4924	subtilase family serine protease
*	?	NC_002947	5617601 =	57 (1.170)	4 (0.090)	4/252	NT	6.3%	coding (1051/1176 nt)	wzy	O‑antigen polymerase
	?	NC_002947	5617660 =	65 (1.380)					coding (992/1176 nt)	wzy	O‑antigen polymerase
*	?	NC_002947	5624427 =	48 (0.980)	4 (0.090)	4/250	NT	8.8%	coding (204/897 nt)	PP_4942	hypothetical protein
	?	NC_002947	5624464 =	37 (0.790)					coding (167/897 nt)	PP_4942	hypothetical protein
*	?	NC_002947	= 5648364	45 (0.920)	3 (0.060)	3/254	NT	6.5%	coding (150/297 nt)	PP_4957	hypothetical protein
	?	NC_002947	= 5648394	43 (0.910)					coding (120/297 nt)	PP_4957	hypothetical protein
*	?	NC_002947	5649805 =	54 (1.100)	5 (0.110)	3/248	NT	9.0%	coding (1388/2127 nt)	PP_4959	diguanylate cyclase
	?	NC_002947	5649839 =	50 (1.080)					coding (1354/2127 nt)	PP_4959	diguanylate cyclase
*	?	NC_002947	= 5667231	42 (0.860)	3 (0.060)	3/250	NT	5.9%	intergenic (+9/+62)	nhaP/PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
	?	NC_002947	= 5667272	56 (1.200)					intergenic (+50/+21)	nhaP/PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
*	?	NC_002947	5671615 =	39 (0.800)	4 (0.100)	4/214	NT	12.2%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671700 =	26 (0.650)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5677796	46 (0.940)	4 (0.090)	4/252	NT	7.6%	coding (209/1860 nt)	PP_4983	amine oxidase
	?	NC_002947	= 5677835	53 (1.130)					coding (170/1860 nt)	PP_4983	amine oxidase
*	?	NC_002947	5678173 =	46 (0.940)	3 (0.060)	3/252	NT	6.3%	intergenic (‑169/‑202)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
	?	NC_002947	5678240 =	45 (0.960)					intergenic (‑236/‑135)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
*	?	NC_002947	= 5687069	47 (0.960)	3 (0.060)	3/250	NT	6.1%	coding (1897/2061 nt)	pilJ	twitching motility protein PilJ
	?	NC_002947	= 5687089	48 (1.030)					coding (1877/2061 nt)	pilJ	twitching motility protein PilJ
*	?	NC_002947	5688301 =	67 (1.370)	4 (0.090)	4/252	NT	6.3%	coding (665/2061 nt)	pilJ	twitching motility protein PilJ
	?	NC_002947	5688340 =	54 (1.150)					coding (626/2061 nt)	pilJ	twitching motility protein PilJ
*	?	NC_002947	= 5712442	46 (0.940)	3 (0.060)	3/252	NT	6.5%	coding (511/624 nt)	PP_5012	hypothetical protein
	?	NC_002947	= 5712482	42 (0.890)					coding (551/624 nt)	PP_5012	hypothetical protein
*	?	NC_002947	5718380 =	53 (1.080)	7 (0.150)	5/252	NT	13.0%	coding (1079/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein
	?	NC_002947	5718426 =	43 (0.910)					coding (1125/1917 nt)	PP_5020	methyl‑accepting chemotaxis protein
*	?	NC_002947	5730207 =	47 (0.960)	4 (0.090)	4/246	NT	7.8%	coding (271/1083 nt)	pip	proline iminopeptidase
	?	NC_002947	5730283 =	50 (1.090)					coding (195/1083 nt)	pip	proline iminopeptidase
*	?	NC_002947	= 5754738	47 (0.960)	4 (0.080)	4/254	NT	8.0%	coding (934/1086 nt)	glnL	two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
	?	NC_002947	= 5754774	47 (0.990)					coding (970/1086 nt)	glnL	two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
*	?	NC_002947	= 5761802	58 (1.190)	4 (0.090)	4/250	NT	7.5%	coding (854/1536 nt)	gpmI	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
	?	NC_002947	= 5761832	43 (0.920)					coding (884/1536 nt)	gpmI	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
*	?	NC_002947	5783118 =	51 (1.040)	3 (0.060)	3/252	NT	5.5%	coding (1593/3309 nt)	kefA	intermediate mechanosensitive channel protein
	?	NC_002947	5783188 =	54 (1.150)					coding (1663/3309 nt)	kefA	intermediate mechanosensitive channel protein
*	?	NC_002947	= 5786495	42 (0.860)	6 (0.150)	6/214	NT	14.8%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786532	35 (0.880)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5817241	58 (1.190)	5 (0.110)	5/250	NT	8.9%	coding (713/1011 nt)	pilT	twitching motility protein
	?	NC_002947	= 5817265	47 (1.010)					coding (689/1011 nt)	pilT	twitching motility protein
*	?	NC_002947	5819865 =	30 (0.610)	3 (0.070)	3/244	NT	8.6%	coding (305/591 nt)	PP_5096	shape determination factor
	?	NC_002947	5819919 =	36 (0.790)					coding (359/591 nt)	PP_5096	shape determination factor
*	?	NC_002947	= 5842227	59 (1.210)	4 (0.090)	4/252	NT	6.8%	coding (796/1431 nt)	calB	coniferyl aldehyde dehydrogenase
	?	NC_002947	= 5842273	53 (1.130)					coding (842/1431 nt)	calB	coniferyl aldehyde dehydrogenase
*	?	NC_002947	= 5854949	48 (0.980)	4 (0.090)	4/252	NT	7.1%	coding (969/1392 nt)	tcyP	sodium/cystine symporter
	?	NC_002947	= 5855010	58 (1.230)					coding (1030/1392 nt)	tcyP	sodium/cystine symporter
*	?	NC_002947	5873510 =	49 (1.000)	6 (0.130)	3/248	NT	11.3%	coding (215/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
	?	NC_002947	5873556 =	48 (1.040)					coding (261/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
*	?	NC_002947	5874548 =	45 (0.920)	5 (0.110)	5/240	NT	9.5%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874630 =	54 (1.210)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	5884738 =	66 (1.350)	4 (0.090)	4/250	NT	6.2%	coding (401/624 nt)	PP_5159	hypothetical protein
	?	NC_002947	5884776 =	59 (1.260)					coding (363/624 nt)	PP_5159	hypothetical protein
*	?	NC_002947	5903760 =	45 (0.920)	5 (0.110)	3/242	NT	11.0%	intergenic (+16/+91)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903842 =	39 (0.860)					intergenic (+98/+9)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5903769	47 (0.960)	7 (0.160)	6/242	NT	14.5%	intergenic (+25/+82)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903831	39 (0.860)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914157 =	34 (0.690)	4 (0.100)	4/206	NT	17.5%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914253 =	11 (0.290)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5925322	53 (1.080)	4 (0.090)	4/250	NT	7.0%	coding (823/1083 nt)	gcvT‑II	aminomethyltransferase
	?	NC_002947	= 5925345	55 (1.180)					coding (800/1083 nt)	gcvT‑II	aminomethyltransferase
*	?	NC_002947	5944028 =	45 (0.920)	3 (0.060)	3/254	NT	6.3%	coding (207/558 nt)	PP_5211	ChaC‑related protein
	?	NC_002947	5944071 =	45 (0.950)					coding (164/558 nt)	PP_5211	ChaC‑related protein
*	?	NC_002947	5945194 =	52 (1.060)	4 (0.080)	4/254	NT	8.3%	coding (349/969 nt)	PP_5212	iron‑sulfur‑binding oxidoreductase
	?	NC_002947	5945235 =	38 (0.800)					coding (308/969 nt)	PP_5212	iron‑sulfur‑binding oxidoreductase
*	?	NC_002947	5972761 =	60 (1.230)	3 (0.060)	3/250	NT	5.1%	coding (50/288 nt)	PP_5725	hypothetical protein
	?	NC_002947	5972798 =	55 (1.180)					coding (87/288 nt)	PP_5725	hypothetical protein
*	?	NC_002947	= 5978361	52 (1.060)	5 (0.110)	5/250	NT	8.5%	coding (756/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	= 5978393	58 (1.240)					coding (724/993 nt)	PP_5241	LuxR family transcriptional regulator
*	?	NC_002947	= 5992690	54 (1.100)	3 (0.070)	3/246	NT	5.3%	coding (681/1263 nt)	opdB	proline‑specific outer membrane porin D
	?	NC_002947	= 5992722	57 (1.240)					coding (713/1263 nt)	opdB	proline‑specific outer membrane porin D
*	?	NC_002947	6019026 =	43 (0.880)	4 (0.090)	4/244	NT	9.4%	coding (174/1074 nt)	dadX	alanine racemase
	?	NC_002947	6019089 =	37 (0.810)					coding (111/1074 nt)	dadX	alanine racemase
*	?	NC_002947	= 6054874	37 (0.760)	3 (0.060)	3/252	NT	8.0%	coding (252/429 nt)	exbD	TonB‑gated outer membrane transporter gating inner membrane protein
	?	NC_002947	= 6054909	33 (0.700)					coding (287/429 nt)	exbD	TonB‑gated outer membrane transporter gating inner membrane protein
*	?	NC_002947	= 6063938	42 (0.860)	4 (0.080)	4/254	NT	8.4%	coding (270/891 nt)	ubiA	4‑hydroxybenzoate octaprenyltransferase
	?	NC_002947	= 6063958	46 (0.970)					coding (290/891 nt)	ubiA	4‑hydroxybenzoate octaprenyltransferase
*	?	NC_002947	6069118 =	50 (1.020)	3 (0.060)	3/254	NT	6.4%	coding (490/897 nt)	PP_5323	M23/M37 family peptidase
	?	NC_002947	6069204 =	39 (0.820)					coding (404/897 nt)	PP_5323	M23/M37 family peptidase
*	?	NC_002947	= 6096455	49 (1.000)	3 (0.070)	3/246	NT	5.9%	coding (243/1416 nt)	pycA	pyruvate carboxylase subunit A
	?	NC_002947	= 6096480	50 (1.090)					coding (218/1416 nt)	pycA	pyruvate carboxylase subunit A
*	?	NC_002947	6121080 =	48 (0.980)	4 (0.090)	4/250	NT	7.4%	coding (1070/1386 nt)	PP_5371	rubredoxin/rubredoxin reductase
	?	NC_002947	6121167 =	54 (1.160)					coding (983/1386 nt)	PP_5371	rubredoxin/rubredoxin reductase
*	?	NC_002947	6152833 =	39 (0.800)	4 (0.090)	4/246	NT	10.9%	coding (414/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	6152875 =	29 (0.630)					coding (456/489 nt)	PP_5738	hypothetical protein